Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0017659 Camellia sinensis var. sinensis HOM05D001081 ORTHO05D007101 3.2e-46 188.0 89 100.0
ECA238G0006 Erigeron canadensis HOM05D001081 ORTHO05D007101 2.7e-37 158.3 82 90.2
PGSC0003DMG401028646 Solanum tuberosum HOM05D001081 ORTHO05D007101 4.7e-37 157.5 82 87.8
PGSC0003DMG402028646 Solanum tuberosum HOM05D001081 ORTHO05D007101 4.7e-37 157.5 82 87.8
vmacro12512 Vaccinium macrocarpon HOM05D001081 ORTHO05D007101 1.0e-36 156.4 82 90.2
CAN.G411.51 Capsicum annuum HOM05D001081 ORTHO05D007101 1.8e-36 155.6 82 86.6
Sopen12g021840 Solanum pennellii HOM05D001081 ORTHO05D007101 1.8e-36 155.6 82 85.4
HanXRQChr14g0429651 Helianthus annuus HOM05D001081 ORTHO05D007101 2.3e-36 155.2 82 87.8
Nitab4.5_0004146g0010 Nicotiana tabacum HOM05D001081 ORTHO05D007101 2.3e-36 155.2 82 87.8
Sopen12g021900 Solanum pennellii HOM05D001081 ORTHO05D007101 2.3e-36 155.2 82 85.4
Nitab4.5_0004513g0030 Nicotiana tabacum HOM05D001081 ORTHO05D007101 3.0e-36 154.8 82 86.6
PSO541G4732 Papaver somniferum HOM05D001081 ORTHO05D007101 3.0e-36 154.8 82 86.6
PSO675G3624 Papaver somniferum HOM05D001081 ORTHO05D007101 3.0e-36 154.8 82 86.6
CiPaw.06G046200 Carya illinoinensis HOM05D001081 ORTHO05D007101 3.9e-36 154.5 82 86.6
Haze_00208 Corylus avellana HOM05D001081 ORTHO05D004708 1.1e-35 152.9 82 85.4
Glyma.05G143900 Glycine max HOM05D001081 ORTHO05D007101 1.1e-35 152.9 82 84.1
Nn6g34886 Nelumbo nucifera HOM05D001081 ORTHO05D007101 1.1e-35 152.9 82 85.4
Peaxi162Scf00071g00017 Petunia axillaris HOM05D001081 ORTHO05D007101 1.1e-35 152.9 82 87.8
Lj4P697T30 Lonicera japonica HOM05D001081 ORTHO05D007101 1.5e-35 152.5 82 85.4
vmacro07565 Vaccinium macrocarpon HOM05D001081 ORTHO05D007101 1.5e-35 152.5 82 87.8
DCAR_013886 Daucus carota HOM05D001081 ORTHO05D007101 2.0e-35 152.1 82 85.4
QL09p008866 Quercus lobata HOM05D001081 ORTHO05D007101 2.0e-35 152.1 82 85.4
QL09p009112 Quercus lobata HOM05D001081 ORTHO05D007101 2.0e-35 152.1 82 85.4
Nn3g16671 Nelumbo nucifera HOM05D001081 ORTHO05D007101 2.6e-35 151.8 82 84.1
Hund21005 Selenicereus undatus HOM05D001081 ORTHO05D007101 2.6e-35 151.8 82 85.4
TWI74G0183 Tripterygium wilfordii HOM05D001081 ORTHO05D007101 2.6e-35 151.8 82 85.4
CsaV3_3G019840 Cucumis sativus L. HOM05D001081 ORTHO05D007101 3.3e-35 151.4 82 84.1
Glyma.08G100200 Glycine max HOM05D001081 ORTHO05D007101 3.3e-35 151.4 82 82.9
Lsat_1_v5_gn_2_7800 Lactuca sativa HOM05D000015 ORTHO05D002445 3.3e-35 151.4 82 84.1
TAR625G0271 Trochodendron aralioides HOM05D001081 ORTHO05D007101 3.3e-35 151.4 82 86.6
Ah.05g173160 Amaranthus hybridus HOM05D001081 ORTHO05D007101 5.7e-35 150.6 82 84.1
Sc13g0009920 Simmondsia chinensis HOM05D001081 ORTHO05D007101 5.7e-35 150.6 82 85.4
Aqoxy4G03008 Aquilegia oxysepala HOM05D001081 ORTHO05D007101 7.4e-35 150.2 82 85.4
Cpa.g.sc3.88 Carica papaya HOM05D001081 ORTHO05D007101 7.4e-35 150.2 82 84.1
MBI07_g23667_MAGBIO Magnolia biondii HOM05D001081 ORTHO05D007101 9.7e-35 149.8 82 82.9
MELO3C008496.2 Cucumis melo HOM05D001081 ORTHO05D007101 1.3e-34 149.4 82 82.9
Ah.03g146510 Amaranthus hybridus HOM05D001081 ORTHO05D007101 1.7e-34 149.1 82 84.1
EL10Ac1g00785 Beta vulgaris HOM05D001081 ORTHO05D007101 2.2e-34 148.7 82 82.9
Lalb_Chr13g0294051 Lupinus albus HOM05D001081 ORTHO05D007101 2.2e-34 148.7 82 80.5
Zm00001eb355650 Zea mays HOM05D001081 ORTHO05D007101 2.2e-34 148.7 82 85.4
Aqoxy3G01434 Aquilegia oxysepala HOM05D001081 ORTHO05D007101 2.8e-34 148.3 82 84.1
CDE05G3015 Ceratophyllum demersum HOM05D001081 ORTHO05D007101 2.8e-34 148.3 82 82.9
AUR62018052 Chenopodium quinoa HOM05D001081 ORTHO05D007101 2.8e-34 148.3 82 84.1
AUR62023429 Chenopodium quinoa HOM05D001081 ORTHO05D007101 2.8e-34 148.3 82 84.1
Cc10_g01340 Coffea canephora HOM05D001081 ORTHO05D007101 2.8e-34 148.3 82 85.4
Cfa016232 Carpinus fangiana HOM05D001081 ORTHO05D007101 3.7e-34 147.9 82 82.9
Os05g0114600 Oryza sativa ssp. japonica HOM05D001081 ORTHO05D007101 3.7e-34 147.9 82 84.1
Solyc12g042700.3 Solanum lycopersicum HOM05D001081 ORTHO05D007101 3.7e-34 147.9 82 81.7
GSVIVG01009969001 Vitis vinifera HOM05D001081 ORTHO05D007101 6.3e-34 147.1 82 82.9
AUR62013725 Chenopodium quinoa HOM05D001081 ORTHO05D007101 8.2e-34 146.7 82 82.9
Eucgr.F01156 Eucalyptus grandis HOM05D001081 ORTHO05D007101 1.8e-33 145.6 82 81.7
VMungo0251G0734 Vigna mungo HOM05D001081 ORTHO05D007101 1.8e-33 145.6 82 80.5
Phvul.003G125501 Phaseolus vulgaris HOM05D001081 ORTHO05D007101 2.4e-33 145.2 82 79.3
Duzib068G1165 Durio zibethinus HOM05D001081 ORTHO05D007101 3.1e-33 144.8 82 80.5
TAR381G1700 Trochodendron aralioides HOM05D001081 ORTHO05D007101 3.1e-33 144.8 82 82.9
BcaC09g51172 Brassica carinata HOM05D001081 ORTHO05D007101 4.1e-33 144.4 82 81.7
BcaNung05107 Brassica carinata HOM05D001081 ORTHO05D007101 4.1e-33 144.4 82 81.7
A01p13390 Brassica napus HOM05D001081 ORTHO05D007101 4.1e-33 144.4 82 81.7
C01p16100 Brassica napus HOM05D001081 ORTHO05D007101 4.1e-33 144.4 82 81.7
BolC1t01570H Brassica oleracea HOM05D001081 ORTHO05D007101 4.1e-33 144.4 82 81.7
BraA01t01281Z Brassica rapa HOM05D001081 ORTHO05D007101 4.1e-33 144.4 82 81.7
Thhalv10026223m.g Eutrema salsugineum HOM05D001081 ORTHO05D007101 4.1e-33 144.4 82 81.7
Phvul.001G061700 Phaseolus vulgaris HOM05D001081 ORTHO05D007101 4.1e-33 144.4 82 79.3
Sp7g20190 Schrenkiella parvula HOM05D001081 ORTHO05D007101 4.1e-33 144.4 82 81.7
Prupe.2G309800 Prunus persica HOM05D001081 ORTHO05D007101 5.3e-33 144.1 81 80.2
Thecc.03G199300 Theobroma cacao HOM05D001081 ORTHO05D007101 5.3e-33 144.1 82 81.7
Carub.0007s1934 Capsella rubella HOM05D001081 ORTHO05D007101 9.1e-33 143.3 82 80.5
CARHR228810 Cardamine hirsuta HOM05D001081 ORTHO05D007101 9.1e-33 143.3 82 80.5
Gohir.D05G099900 Gossypium hirsutum HOM05D001081 ORTHO05D007101 9.1e-33 143.3 82 78.0
Gorai.009G103900 Gossypium raimondii HOM05D001081 ORTHO05D007101 9.1e-33 143.3 82 78.0
Lj5g0017992 Lotus japonicus HOM05D001081 ORTHO05D007101 9.1e-33 143.3 82 79.3
Lj4g0009093 Lotus japonicus HOM05D001081 ORTHO05D007101 1.2e-32 142.9 82 78.0
unitig_32.g11232 Utricularia gibba HOM05D001081 ORTHO05D007101 1.2e-32 142.9 82 80.5
THA.LOC104798899 Tarenaya hassleriana HOM05D001081 ORTHO05D007101 1.6e-32 142.5 82 78.0
ATR1134G096 Amborella trichopoda HOM05D001081 ORTHO05D007101 2.0e-32 142.1 80 80.0
AL7G31700 Arabidopsis lyrata HOM05D001081 ORTHO05D007101 2.0e-32 142.1 82 80.5
AT4G22000 Arabidopsis thaliana HOM05D001081 ORTHO05D007101 2.0e-32 142.1 82 80.5
Duzib205G0894 Durio zibethinus HOM05D001081 ORTHO05D007101 2.0e-32 142.1 82 79.3
FvH4_7g31560 Fragaria vesca HOM05D001081 ORTHO05D007101 2.0e-32 142.1 82 79.3
FAN01G2588 Fragaria x ananassa HOM05D001081 ORTHO05D007101 2.0e-32 142.1 82 79.3
FAN06G0656 Fragaria x ananassa HOM05D001081 ORTHO05D007101 2.0e-32 142.1 82 79.3
FAN10G3364 Fragaria x ananassa HOM05D001081 ORTHO05D007101 2.0e-32 142.1 82 79.3
FAN10G4231 Fragaria x ananassa HOM05D001081 ORTHO05D007101 2.0e-32 142.1 82 79.3
Sed0024875 Sechium edule HOM05D001081 ORTHO05D007101 2.6e-32 141.7 82 78.0
COL.COLO4_16767 Corchorus olitorius HOM05D001081 ORTHO05D007101 3.5e-32 141.4 82 79.3
FAN06G3917 Fragaria x ananassa HOM05D001081 ORTHO05D007101 4.5e-32 141.0 82 79.3
MD07G1288300 Malus domestica HOM05D001081 ORTHO05D007101 4.5e-32 141.0 82 76.8
Ciclev10022846m.g Citrus clementina HOM05D001081 ORTHO05D007101 5.9e-32 140.6 82 78.0
THA.LOC104823111 Tarenaya hassleriana HOM05D001081 ORTHO05D007101 5.9e-32 140.6 82 76.8
Gohir.A05G100100 Gossypium hirsutum HOM05D001081 ORTHO05D007101 7.7e-32 140.2 82 76.8
HPP92_008968 Vanilla planifolia HOM05D001081 ORTHO05D007101 7.7e-32 140.2 82 75.6
FAN03G0412 Fragaria x ananassa HOM05D001081 ORTHO05D007101 1.3e-31 139.4 82 78.0
Psat7g080240 Pisum sativum HOM05D001081 ORTHO05D007101 1.3e-31 139.4 82 76.8
PGR083G2221 Punica granatum HOM05D001081 ORTHO05D007101 1.3e-31 139.4 82 78.0
CANSAT21G1508 Cannabis sativa HOM05D001081 ORTHO05D007101 2.2e-31 138.7 82 79.3
SGA_v2.0_scaffold19G08564 Striga asiatica HOM05D001081 ORTHO05D007101 2.2e-31 138.7 82 79.3
Sed0012325 Sechium edule HOM05D001081 ORTHO05D007101 2.9e-31 138.3 82 74.4
SGA_v2.0_scaffold25G11207 Striga asiatica HOM05D001081 ORTHO05D007101 2.9e-31 138.3 82 78.0
Migut.N03179 Erythranthe guttata HOM05D001081 ORTHO05D007101 3.8e-31 137.9 82 76.8
TPR.G9557 Trifolium pratense HOM05D001081 ORTHO05D007101 3.8e-31 137.9 82 76.8
Ca_18157_v3 Cicer arietinum L. HOM05D001081 ORTHO05D007101 5.0e-31 137.5 82 75.6
SEGI_15379 Sequoiadendron giganteum HOM05D001081 ORTHO05D007101 5.0e-31 137.5 82 78.0
Medtr8g079498 Medicago truncatula HOM05D001081 ORTHO05D007101 8.5e-31 136.7 82 75.6
RcHm_v2.0_Chr1g0380551 Rosa chinensis HOM05D001081 ORTHO05D007101 8.5e-31 136.7 82 76.8
Potri.012G015800 Populus trichocarpa HOM05D001081 ORTHO05D007101 1.1e-30 136.3 82 75.6
Atru.chr12.2201 Acer truncatum HOM05D001081 ORTHO05D007101 1.5e-30 136.0 83 75.9
MSTRG.22347 Avicennia marina HOM05D001081 ORTHO05D007101 1.9e-30 135.6 82 76.8
SalBow6G0310 Salvia bowleyana HOM05D001081 ORTHO05D007101 1.9e-30 135.6 82 75.6
Manes.18G126800 Manihot esculenta HOM05D001081 ORTHO05D007101 3.2e-30 134.8 82 76.8
Aa31LG6G3950 Aethionema arabicum HOM05D001081 ORTHO05D007101 4.2e-30 134.4 82 75.6
Potri.015G012700 Populus trichocarpa HOM05D001081 ORTHO05D007101 5.5e-30 134.0 82 74.4
SHI02421 Sapria himalayana HOM05D006156 ORTHO05D007101 9.4e-30 133.3 82 73.2
MSTRG.25269 Avicennia marina HOM05D001081 ORTHO05D007101 2.7e-29 131.7 77 80.5
ClCG05G008950 Citrullus lanatus HOM05D001081 ORTHO05D007101 4.7e-29 131.0 75 81.3
BcaB03g11721 Brassica carinata HOM05D001081 ORTHO05D007101 6.7e-28 127.1 83 73.5
Atru.chr9.478 Acer truncatum HOM05D001081 ORTHO05D007101 1.5e-27 125.9 83 69.9
CSS0023065 Camellia sinensis var. sinensis HOM05D001081 ORTHO05D007101 5.7e-27 124.0 63 93.7
CDE11G0170 Ceratophyllum demersum HOM05D001081 ORTHO05D007101 9.7e-27 123.2 82 75.6
Solyc12g042720.3 Solanum lycopersicum HOM05D001081 ORTHO05D007101 2.8e-26 121.7 67 83.6
Dinv31879 Davidia involucrata HOM05D001081 ORTHO05D007101 2.4e-25 118.6 65 87.7
CSS0034162 Camellia sinensis var. sinensis HOM05D001081 ORTHO05D007101 7.0e-25 117.1 59 94.9
SMO356G0374 Selaginella moellendorffii HOM05D001081 ORTHO05D007101 3.8e-23 111.3 77 67.5
Pp3c15_6340 Physcomitrium patens HOM05D001081 ORTHO05D007101 2.1e-21 105.5 79 63.3
Mapoly0012s0096 Marchantia polymorpha HOM05D001081 ORTHO05D007101 1.4e-20 102.8 82 58.5
Actinidia17007 Actinidia chinensis HOM05D001081 ORTHO05D007101 1.5e-19 99.4 48 89.6
Gohir.A09G033580 Gossypium hirsutum HOM05D001081 ORTHO05D007101 2.3e-15 85.5 55 69.1
CBR_g8977 Chara braunii HOM05D001081 ORTHO05D007101 1.9e-14 82.4 77 48.1
Gohir.D09G034100 Gossypium hirsutum HOM05D001081 ORTHO05D007101 5.5e-14 80.9 55 67.3
arahy.Tifrunner.gnm1.ann1.EUX55C Arachis hypogaea HOM05D001081 ORTHO05D007101 4.1e-09 64.7 39 74.4
Nitab4.5_0002544g0090 Nicotiana tabacum HOM05D001081 ORTHO05D007101 5.4e-09 64.3 40 67.5
Gorai.006G039100 Gossypium raimondii HOM05D001081 ORTHO05D007101 2.0e-08 62.4 41 70.7
Nitab4.5_0026266g0010 Nicotiana tabacum HOM05D002996 ORTHO05D025899 4.3e-06 54.7 41 75.6
Nitab4.5_0011266g0010 Nicotiana tabacum HOM05D002996 ORTHO05D025899 5.6e-06 54.3 41 73.2


User provided reference genes

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