Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0017583 Camellia sinensis var. sinensis HOM05D007495 ORTHO05D009552 1.2e-98 363.2 189 100.0
Actinidia24137 Actinidia chinensis HOM05D007495 ORTHO05D009552 6.1e-71 271.2 170 84.1
Hma1.2p1_0051F.1_g029310 Hydrangea macrophylla HOM05D007495 ORTHO05D009552 2.6e-69 265.8 173 78.0
Cc01_g10460 Coffea canephora HOM05D007495 ORTHO05D009552 4.4e-69 265.0 183 71.6
Dinv34730 Davidia involucrata HOM05D007495 ORTHO05D009552 1.3e-68 263.5 175 78.9
Oeu018477.1 Olea europaea HOM05D007495 ORTHO05D009552 9.2e-67 257.3 174 73.0
Rhsim13G0099600 Rhododendron simsii HOM05D007495 ORTHO05D009552 1.2e-66 256.9 170 79.4
SGA_v2.0_scaffold436G51603 Striga asiatica HOM05D007495 ORTHO05D009552 4.3e-64 248.4 183 67.8
MSTRG.17767 Avicennia marina HOM05D007495 ORTHO05D009552 2.1e-63 246.1 182 67.6
GSVIVG01031491001 Vitis vinifera HOM05D007495 ORTHO05D009552 2.3e-62 242.7 172 72.1
Atru.chr3.3537 Acer truncatum HOM05D007495 ORTHO05D009552 7.5e-61 237.7 174 67.2
vmacro03264 Vaccinium macrocarpon HOM05D007495 ORTHO05D009552 7.5e-61 237.7 208 62.0
Migut.N02567 Erythranthe guttata HOM05D007495 ORTHO05D009552 1.3e-60 236.9 174 67.8
QL01p015526 Quercus lobata HOM05D007495 ORTHO05D009552 1.7e-60 236.5 172 66.3
TAR633G0300 Trochodendron aralioides HOM05D007495 ORTHO05D009552 3.7e-60 235.3 174 67.8
Lj2C1012G12 Lonicera japonica HOM05D007495 ORTHO05D009552 6.4e-60 234.6 169 69.8
Nn6g35262 Nelumbo nucifera HOM05D007495 ORTHO05D009552 1.9e-59 233.0 172 66.9
CiPaw.13G124600 Carya illinoinensis HOM05D007495 ORTHO05D009552 4.1e-59 231.9 169 66.9
Nitab4.5_0000329g0280 Nicotiana tabacum HOM05D007495 ORTHO05D009552 4.1e-59 231.9 183 63.9
Prupe.6G109500 Prunus persica HOM05D007495 ORTHO05D009552 9.2e-59 230.7 169 66.9
Nitab4.5_0005092g0010 Nicotiana tabacum HOM05D007495 ORTHO05D009552 1.2e-58 230.3 176 65.3
ClCG02G021490 Citrullus lanatus HOM05D007495 ORTHO05D009552 2.7e-58 229.2 169 66.3
CsaV3_6G014270 Cucumis sativus L. HOM05D007495 ORTHO05D009552 7.8e-58 227.6 169 67.5
SalBow3G3637 Salvia bowleyana HOM05D007495 ORTHO05D009552 1.9e-56 223.0 175 62.3
Ciclev10029419m.g Citrus clementina HOM05D007495 ORTHO05D009552 3.3e-56 222.2 178 64.0
Lsat_1_v5_gn_2_96660 Lactuca sativa HOM05D007495 ORTHO05D009552 4.3e-56 221.9 175 65.7
SalBow1G5708 Salvia bowleyana HOM05D007495 ORTHO05D009552 4.3e-56 221.9 177 61.6
Haze_23728 Corylus avellana HOM05D007495 ORTHO05D009552 5.6e-56 221.5 174 66.1
MELO3C026944.2 Cucumis melo HOM05D007495 ORTHO05D009552 1.6e-55 219.9 168 64.9
FAN25G1473 Fragaria x ananassa HOM05D007495 ORTHO05D009552 1.6e-55 219.9 169 63.3
CSS0034387 Camellia sinensis var. sinensis HOM05D007495 ORTHO05D009552 4.7e-55 218.4 116 96.6
DCAR_018778 Daucus carota HOM05D007495 ORTHO05D009552 4.7e-55 218.4 172 67.4
Cfa010302 Carpinus fangiana HOM05D007495 ORTHO05D009552 1.1e-54 217.2 174 64.4
MD11G1146400 Malus domestica HOM05D007495 ORTHO05D009552 1.1e-54 217.2 171 64.3
RcHm_v2.0_Chr5g0057451 Rosa chinensis HOM05D007495 ORTHO05D009552 1.4e-54 216.9 169 63.3
PGSC0003DMG400010906 Solanum tuberosum HOM05D007495 ORTHO05D009552 1.4e-54 216.9 188 64.9
Manes.04G014200 Manihot esculenta HOM05D007495 ORTHO05D009552 2.3e-54 216.1 175 60.6
PGSC0003DMG400000407 Solanum tuberosum HOM05D007495 ORTHO05D009552 4.0e-54 215.3 191 60.7
FAN21G3793 Fragaria x ananassa HOM05D007495 ORTHO05D009552 2.0e-53 213.0 168 60.7
Solyc11g066240.3 Solanum lycopersicum HOM05D007495 ORTHO05D009552 2.6e-53 212.6 190 64.2
Sopen11g025970 Solanum pennellii HOM05D007495 ORTHO05D009552 1.3e-52 210.3 191 62.8
Peaxi162Scf00892g00019 Petunia axillaris HOM05D007495 ORTHO05D009552 2.9e-52 209.1 155 70.3
Sopen01g017570 Solanum pennellii HOM05D007495 ORTHO05D009552 4.9e-52 208.4 193 58.0
Sed0010722 Sechium edule HOM05D007495 ORTHO05D009552 5.4e-51 204.9 181 59.7
HanXRQChr09g0259381 Helianthus annuus HOM05D007495 ORTHO05D009552 2.1e-50 203.0 169 59.2
Sabra04G0146300 Salix brachista HOM05D007495 ORTHO05D009552 3.5e-50 202.2 169 60.4
Potri.004G215300 Populus trichocarpa HOM05D007495 ORTHO05D009552 4.6e-50 201.8 169 59.8
Hund08367 Selenicereus undatus HOM05D007495 ORTHO05D009552 1.3e-49 200.3 175 60.6
AUR62014942 Chenopodium quinoa HOM05D007495 ORTHO05D009552 3.0e-49 199.1 170 60.6
AUR62029199 Chenopodium quinoa HOM05D007495 ORTHO05D009552 3.9e-49 198.7 170 60.6
Eucgr.B03939 Eucalyptus grandis HOM05D007495 ORTHO05D009552 3.3e-48 195.7 161 59.6
Aqoxy1G01135 Aquilegia oxysepala HOM05D007495 ORTHO05D009552 6.8e-46 188.0 173 55.5
Lalb_Chr24g0394861 Lupinus albus HOM05D007495 ORTHO05D009552 2.9e-44 182.6 170 57.1
EL10Ac9g22596 Beta vulgaris HOM05D007495 ORTHO05D009552 2.4e-43 179.5 202 50.5
Thecc.09G349500 Theobroma cacao HOM05D007495 ORTHO05D009552 2.4e-43 179.5 173 50.3
Ah.01g003160 Amaranthus hybridus HOM05D007495 ORTHO05D009552 5.4e-43 178.3 168 58.3
MBI11_g41957_MAGBIO Magnolia biondii HOM05D007495 ORTHO05D009552 3.5e-42 175.6 166 54.8
PGR102G0900 Punica granatum HOM05D007495 ORTHO05D009552 4.6e-42 175.3 169 51.5
PSO210G3489 Papaver somniferum HOM05D007495 ORTHO05D009552 3.9e-41 172.2 168 53.6
FvH4_3g30910 Fragaria vesca HOM05D007495 ORTHO05D009552 5.1e-41 171.8 142 57.7
PSO210G2188 Papaver somniferum HOM05D007495 ORTHO05D009552 4.3e-40 168.7 168 52.4
Glyma.13G322700 Glycine max HOM05D007495 ORTHO05D009552 7.3e-40 167.9 174 48.9
arahy.Tifrunner.gnm1.ann1.F5YJ3L Arachis hypogaea HOM05D007495 ORTHO05D009552 9.6e-40 167.5 165 53.3
arahy.Tifrunner.gnm1.ann1.KUS9HA Arachis hypogaea HOM05D007495 ORTHO05D009552 3.6e-39 165.6 156 55.1
CARHR120870 Cardamine hirsuta HOM05D007495 ORTHO05D009552 3.6e-39 165.6 166 53.0
A03p26400 Brassica napus HOM05D007495 ORTHO05D009552 6.2e-39 164.9 166 53.0
BraA03t11855Z Brassica rapa HOM05D007495 ORTHO05D009552 6.2e-39 164.9 166 53.0
VMungo1080G0225 Vigna mungo HOM05D007495 ORTHO05D009552 6.2e-39 164.9 161 50.3
Carub.0004s0888 Capsella rubella HOM05D007495 ORTHO05D009552 1.1e-38 164.1 166 53.6
Sp4g10910 Schrenkiella parvula HOM05D007495 ORTHO05D009552 1.1e-38 164.1 167 56.3
BcaB01g03091 Brassica carinata HOM05D007495 ORTHO05D009552 1.8e-38 163.3 159 53.5
Thhalv10017338m.g Eutrema salsugineum HOM05D007495 ORTHO05D009552 2.4e-38 162.9 159 54.1
C03p31690 Brassica napus HOM05D007495 ORTHO05D009552 3.1e-38 162.5 166 51.8
Phvul.005G131100 Phaseolus vulgaris HOM05D007495 ORTHO05D009552 5.3e-38 161.8 167 49.7
AL4G22050 Arabidopsis lyrata HOM05D007495 ORTHO05D009552 1.2e-37 160.6 166 52.4
BcaC01g04959 Brassica carinata HOM05D007495 ORTHO05D009552 1.2e-37 160.6 166 51.2
BolC3t15512H Brassica oleracea HOM05D007495 ORTHO05D009552 1.2e-37 160.6 166 51.2
THA.LOC104800583 Tarenaya hassleriana HOM05D007495 ORTHO05D009552 1.5e-37 160.2 167 49.1
AT2G28105 Arabidopsis thaliana HOM05D007495 ORTHO05D009552 2.0e-37 159.8 166 51.8
THA.LOC104808393 Tarenaya hassleriana HOM05D007495 ORTHO05D009552 7.6e-37 157.9 163 50.9
Duzib168G1093 Durio zibethinus HOM05D007495 ORTHO05D009552 3.8e-36 155.6 167 47.9
ATR1132G058 Amborella trichopoda HOM05D007495 ORTHO05D009552 1.9e-35 153.3 174 47.1
HPP92_026750 Vanilla planifolia HOM05D007495 ORTHO05D009552 1.9e-35 153.3 161 48.4
Gohir.A11G006200 Gossypium hirsutum HOM05D007495 ORTHO05D009552 1.3e-33 147.1 166 44.0
Duzib147G1262 Durio zibethinus HOM05D007495 ORTHO05D009552 2.3e-33 146.4 166 47.0
Gorai.007G006500 Gossypium raimondii HOM05D007495 ORTHO05D009552 8.7e-33 144.4 166 44.6
CAN.G546.21 Capsicum annuum HOM05D007495 ORTHO05D009552 1.5e-32 143.7 103 69.9
unitig_27.g25050 Utricularia gibba HOM05D007495 ORTHO05D009552 1.9e-32 143.3 175 45.1
Aa31LG5G8040 Aethionema arabicum HOM05D002446 ORTHO05D002941 9.6e-32 141.0 149 51.7
Gohir.D11G005300 Gossypium hirsutum HOM05D007495 ORTHO05D009552 2.8e-31 139.4 166 43.4
Pp3c2_14140 Physcomitrium patens HOM05D007495 ORTHO05D009552 2.0e-29 133.3 157 44.6
CDE08G1192 Ceratophyllum demersum HOM05D007495 ORTHO05D009552 5.8e-29 131.7 149 46.3
Solyc01g034070.2 Solanum lycopersicum HOM05D007495 ORTHO05D009552 7.6e-29 131.3 136 53.7
QL01p015485 Quercus lobata HOM05D007495 ORTHO05D000007 2.6e-21 106.3 126 49.2
COL.COLO4_31833 Corchorus olitorius HOM05D000070 ORTHO05D005950 9.9e-21 104.4 97 53.6
Thecc.09G349300 Theobroma cacao HOM05D007495 ORTHO05D009552 3.8e-20 102.4 115 44.3
AagrBONN_evm.TU.Sc2ySwM_228.3308 Anthoceros agrestis HOM05D007495 ORTHO05D009552 3.2e-19 99.4 135 36.3
TAR636G3027 Trochodendron aralioides HOM05D007495 ORTHO05D009552 1.8e-17 93.6 80 62.5
arahy.Tifrunner.gnm1.ann1.48A6J1 Arachis hypogaea HOM05D007495 ORTHO05D009552 8.7e-17 91.3 91 53.8
SEGI_19183 Sequoiadendron giganteum HOM05D007495 ORTHO05D009552 5.6e-16 88.6 105 41.0
Actinidia07176 Actinidia chinensis HOM05D007495 ORTHO05D009552 9.6e-16 87.8 49 87.8
arahy.Tifrunner.gnm1.ann1.SCS43X Arachis hypogaea HOM05D007495 ORTHO05D009552 7.4e-08 61.6 52 51.9
arahy.Tifrunner.gnm1.ann1.U22N6I Arachis hypogaea HOM05D001167 ORTHO05D014890 1.8e-06 57.0 36 72.2


User provided reference genes

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