Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0017580 Camellia sinensis var. sinensis HOM05D005897 ORTHO05D007128 6.4e-103 377.5 199 100.0
Dinv42424 Davidia involucrata HOM05D005897 ORTHO05D007128 4.7e-37 158.7 191 48.2
Actinidia39626 Actinidia chinensis HOM05D005897 ORTHO05D007128 6.1e-29 131.7 175 47.4
Nitab4.5_0008755g0010 Nicotiana tabacum HOM05D005897 ORTHO05D007128 3.0e-28 129.4 176 46.0
SalBow6G0024 Salvia bowleyana HOM05D005897 ORTHO05D007128 5.2e-28 128.6 185 43.8
TAR624G1366 Trochodendron aralioides HOM05D005897 ORTHO05D007128 6.8e-28 128.3 190 47.4
TWI32G0373 Tripterygium wilfordii HOM05D005897 ORTHO05D007128 1.5e-27 127.1 181 45.9
SGA_v2.0_scaffold21G09544 Striga asiatica HOM05D005897 ORTHO05D007128 3.4e-27 125.9 185 45.4
Rhsim05G0003600 Rhododendron simsii HOM05D005897 ORTHO05D007128 7.5e-27 124.8 199 46.7
TWI34G1248 Tripterygium wilfordii HOM05D005897 ORTHO05D007128 2.2e-26 123.2 188 43.1
Haze_26054 Corylus avellana HOM05D005897 ORTHO05D007128 2.8e-26 122.9 186 48.9
PGR044G2287 Punica granatum HOM05D005897 ORTHO05D007128 3.7e-26 122.5 197 42.1
Duzib150G1683 Durio zibethinus HOM05D005897 ORTHO05D007128 6.3e-26 121.7 204 45.1
Oeu055332.1 Olea europaea HOM05D005897 ORTHO05D007128 6.3e-26 121.7 195 41.5
Migut.J00894 Erythranthe guttata HOM05D005897 ORTHO05D007128 1.1e-25 120.9 181 45.3
Manes.16G091700 Manihot esculenta HOM05D005897 ORTHO05D007128 1.8e-25 120.2 200 39.0
Duzib168G1262 Durio zibethinus HOM05D005897 ORTHO05D007128 2.4e-25 119.8 195 43.1
Gohir.D06G078500 Gossypium hirsutum HOM05D005897 ORTHO05D007128 2.4e-25 119.8 181 44.2
Gohir.A06G079100 Gossypium hirsutum HOM05D005897 ORTHO05D007128 3.1e-25 119.4 183 43.7
Gorai.010G091500 Gossypium raimondii HOM05D005897 ORTHO05D007128 5.4e-25 118.6 181 43.6
Thecc.09G071600 Theobroma cacao HOM05D005897 ORTHO05D007128 7.0e-25 118.2 202 40.6
COL.COLO4_21221 Corchorus olitorius HOM05D005897 ORTHO05D007128 9.2e-25 117.9 205 43.9
FAN26G0251 Fragaria x ananassa HOM05D005897 ORTHO05D007128 1.2e-24 117.5 199 40.2
Gohir.A05G035400 Gossypium hirsutum HOM05D005897 ORTHO05D007128 1.6e-24 117.1 198 41.9
Oeu055333.1 Olea europaea HOM05D005897 ORTHO05D007128 2.0e-24 116.7 185 45.4
QL11p002200 Quercus lobata HOM05D005897 ORTHO05D007128 2.7e-24 116.3 196 42.9
Cfa002951 Carpinus fangiana HOM05D005897 ORTHO05D007128 4.5e-24 115.5 195 44.6
TAR383G0419 Trochodendron aralioides HOM05D005897 ORTHO05D007128 4.5e-24 115.5 186 42.5
FAN26G0677 Fragaria x ananassa HOM05D005897 ORTHO05D007128 5.9e-24 115.2 211 39.8
Gohir.D05G036900 Gossypium hirsutum HOM05D005897 ORTHO05D007128 5.9e-24 115.2 199 43.2
VMungo1309G2633 Vigna mungo HOM05D005897 ORTHO05D007128 1.0e-23 114.4 177 42.4
Peaxi162Scf00191g00103 Petunia axillaris HOM05D005897 ORTHO05D007128 1.3e-23 114.0 202 40.1
RcHm_v2.0_Chr2g0095761 Rosa chinensis HOM05D005897 ORTHO05D007128 1.7e-23 113.6 191 40.8
Gorai.009G037400 Gossypium raimondii HOM05D005897 ORTHO05D007128 2.9e-23 112.8 199 42.7
Nitab4.5_0001699g0070 Nicotiana tabacum HOM05D005897 ORTHO05D007128 2.9e-23 112.8 189 42.9
BcaC03g13798 Brassica carinata HOM05D005897 ORTHO05D007128 3.8e-23 112.5 183 40.4
BolC2t07071H Brassica oleracea HOM05D005897 ORTHO05D007128 3.8e-23 112.5 183 40.4
FAN23G1701 Fragaria x ananassa HOM05D005897 ORTHO05D007128 8.6e-23 111.3 201 38.8
Prupe.7G193600 Prunus persica HOM05D005897 ORTHO05D007128 1.1e-22 110.9 202 43.1
FAN28G0476 Fragaria x ananassa HOM05D005897 ORTHO05D007128 1.5e-22 110.5 201 38.3
Sabra06G0107900 Salix brachista HOM05D005897 ORTHO05D007128 1.5e-22 110.5 199 39.7
Nitab4.5_0000400g0090 Nicotiana tabacum HOM05D005897 ORTHO05D007128 2.5e-22 109.8 217 38.7
A02p06480 Brassica napus HOM05D005897 ORTHO05D007128 3.3e-22 109.4 183 40.4
BraA02t05593Z Brassica rapa HOM05D005897 ORTHO05D007128 3.3e-22 109.4 183 40.4
Ciclev10009511m.g Citrus clementina HOM05D005897 ORTHO05D007128 4.3e-22 109.0 192 38.0
Lj6g0011186 Lotus japonicus HOM05D005897 ORTHO05D007128 1.2e-21 107.5 176 40.3
BraA10t44004Z Brassica rapa HOM05D005897 ORTHO05D007128 1.6e-21 107.1 181 39.8
CANSAT56G4244 Cannabis sativa HOM05D005897 ORTHO05D007128 1.6e-21 107.1 188 42.6
CiPaw.03G202200 Carya illinoinensis HOM05D005897 ORTHO05D007128 1.6e-21 107.1 185 42.2
Aa31LG4G13050 Aethionema arabicum HOM05D005897 ORTHO05D007128 2.1e-21 106.7 179 41.3
A10p19270 Brassica napus HOM05D005897 ORTHO05D007128 2.8e-21 106.3 181 40.9
Phvul.009G224300 Phaseolus vulgaris HOM05D005897 ORTHO05D007128 3.6e-21 105.9 172 41.3
FAN19G1802 Fragaria x ananassa HOM05D005897 ORTHO05D007128 8.0e-21 104.8 197 38.1
MSTRG.19434 Avicennia marina HOM05D005897 ORTHO05D007128 1.0e-20 104.4 187 39.6
FvH4_1g09230 Fragaria vesca HOM05D005897 ORTHO05D007128 1.0e-20 104.4 197 38.1
Nitab4.5_0001092g0030 Nicotiana tabacum HOM05D005897 ORTHO05D007128 1.0e-20 104.4 216 37.5
Ciclev10024151m.g Citrus clementina HOM05D005897 ORTHO05D007128 1.4e-20 104.0 204 38.2
Sp5g18750 Schrenkiella parvula HOM05D005897 ORTHO05D007128 1.4e-20 104.0 179 40.8
Oeu010835.1 Olea europaea HOM05D005897 ORTHO05D007128 1.8e-20 103.6 183 42.6
Thhalv10014753m.g Eutrema salsugineum HOM05D005897 ORTHO05D007128 2.3e-20 103.2 188 39.4
Cpa.g.sc1772.1 Carica papaya HOM05D005897 ORTHO05D007128 3.0e-20 102.8 176 39.2
CiPaw.04G140700 Carya illinoinensis HOM05D005897 ORTHO05D007128 3.0e-20 102.8 204 38.2
BcaB05g22814 Brassica carinata HOM05D005897 ORTHO05D007128 5.2e-20 102.1 184 38.6
Ca_05224_v3 Cicer arietinum L. HOM05D005897 ORTHO05D007128 5.2e-20 102.1 183 36.1
THA.LOC104811289 Tarenaya hassleriana HOM05D005897 ORTHO05D007128 6.8e-20 101.7 188 44.1
AT3G43110 Arabidopsis thaliana HOM05D005897 ORTHO05D007128 1.2e-19 100.9 189 39.2
Glyma.15G181800 Glycine max HOM05D005897 ORTHO05D007128 1.2e-19 100.9 186 36.0
AL5G21230 Arabidopsis lyrata HOM05D005897 ORTHO05D007128 1.5e-19 100.5 182 42.3
AT5G20790 Arabidopsis thaliana HOM05D005897 ORTHO05D007128 2.0e-19 100.1 190 37.4
Atru.chr7.1754 Acer truncatum HOM05D005897 ORTHO05D007128 2.6e-19 99.8 198 39.4
C03p11770 Brassica napus HOM05D005897 ORTHO05D007128 3.4e-19 99.4 185 38.9
BolC3t13648H Brassica oleracea HOM05D005897 ORTHO05D007128 3.4e-19 99.4 185 38.9
A03p10250 Brassica napus HOM05D005897 ORTHO05D007128 4.4e-19 99.0 186 38.2
BcaB08g36527 Brassica carinata HOM05D005897 ORTHO05D007128 5.7e-19 98.6 182 38.5
BcaB01g04771 Brassica carinata HOM05D005897 ORTHO05D007128 9.8e-19 97.8 181 39.8
Nn8g38553 Nelumbo nucifera HOM05D005897 ORTHO05D007128 9.8e-19 97.8 211 35.1
Rhsim03G0226100 Rhododendron simsii HOM05D005897 ORTHO05D007128 9.8e-19 97.8 175 44.0
CARHR152530 Cardamine hirsuta HOM05D005897 ORTHO05D007128 1.3e-18 97.4 181 39.2
Manes.03G043500 Manihot esculenta HOM05D005897 ORTHO05D007128 1.3e-18 97.4 195 36.4
BraA03t10334Z Brassica rapa HOM05D005897 ORTHO05D007128 1.7e-18 97.1 186 37.6
Sp6g23730 Schrenkiella parvula HOM05D005897 ORTHO05D007128 2.2e-18 96.7 209 34.4
TPR.G4016 Trifolium pratense HOM05D005897 ORTHO05D007128 2.9e-18 96.3 183 36.6
Thhalv10002680m.g Eutrema salsugineum HOM05D005897 ORTHO05D007128 4.9e-18 95.5 180 38.3
Glyma.13G113000 Glycine max HOM05D005897 ORTHO05D007128 8.3e-18 94.7 169 42.0
AL6G32310 Arabidopsis lyrata HOM05D005897 ORTHO05D007128 1.4e-17 94.0 213 34.7
BcaC04g19466 Brassica carinata HOM05D005897 ORTHO05D007128 1.4e-17 94.0 182 36.8
Gohir.D07G016500 Gossypium hirsutum HOM05D005897 ORTHO05D007128 1.4e-17 94.0 188 38.3
Gorai.001G017300 Gossypium raimondii HOM05D005897 ORTHO05D007128 1.4e-17 94.0 188 38.3
Carub.0006s1909 Capsella rubella HOM05D005897 ORTHO05D007128 1.8e-17 93.6 207 37.2
MD15G1222300 Malus domestica HOM05D005897 ORTHO05D007128 1.8e-17 93.6 196 39.8
Medtr2g043710 Medicago truncatula HOM05D005897 ORTHO05D007128 1.8e-17 93.6 188 36.2
Psat1g137480 Pisum sativum HOM05D005897 ORTHO05D007128 1.8e-17 93.6 181 35.9
Glyma.09G073050 Glycine max HOM05D005897 ORTHO05D007128 2.4e-17 93.2 197 36.5
THA.LOC104799609 Tarenaya hassleriana HOM05D005897 ORTHO05D007128 2.4e-17 93.2 207 35.3
PGR142G3671 Punica granatum HOM05D005897 ORTHO05D007128 5.4e-17 92.0 190 38.4
CARHR192060 Cardamine hirsuta HOM05D005897 ORTHO05D007128 7.0e-17 91.7 182 41.8
arahy.Tifrunner.gnm1.ann1.K6A74J Arachis hypogaea HOM05D005897 ORTHO05D007128 9.2e-17 91.3 175 38.3
C09p55420 Brassica napus HOM05D005897 ORTHO05D007128 9.2e-17 91.3 183 36.1
BolC9t58404H Brassica oleracea HOM05D005897 ORTHO05D007128 9.2e-17 91.3 183 36.1
VMungo1215G2819 Vigna mungo HOM05D005897 ORTHO05D007128 1.2e-16 90.9 168 39.9
Carub.0005s0898 Capsella rubella HOM05D005897 ORTHO05D007128 1.6e-16 90.5 181 38.1
Gohir.A07G016700 Gossypium hirsutum HOM05D005897 ORTHO05D007128 1.6e-16 90.5 188 37.8
Dinv25518 Davidia involucrata HOM05D005897 ORTHO05D007128 2.0e-16 90.1 106 50.9
Sopen07g022000 Solanum pennellii HOM05D000392 ORTHO05D002065 2.0e-16 90.1 180 38.3
Nn6g35653 Nelumbo nucifera HOM05D005897 ORTHO05D007128 5.9e-16 88.6 210 33.3
Lsat_1_v5_gn_5_139320 Lactuca sativa HOM05D005897 ORTHO05D007128 1.3e-15 87.4 208 34.1
Actinidia29946 Actinidia chinensis HOM05D005897 ORTHO05D007128 3.0e-15 86.3 190 37.4
Migut.L01590 Erythranthe guttata HOM05D005897 ORTHO05D007128 3.0e-15 86.3 186 37.1
Phvul.003G128400 Phaseolus vulgaris HOM05D005897 ORTHO05D007128 1.2e-13 80.9 183 36.6
Lj4g0017959 Lotus japonicus HOM05D005897 ORTHO05D007128 1.6e-13 80.5 180 37.8
Potri.006G137700 Populus trichocarpa HOM05D005897 ORTHO05D007128 2.8e-13 79.7 204 32.8
unitig_22.g5071 Utricularia gibba HOM05D005897 ORTHO05D007128 2.8e-13 79.7 175 36.6
MD02G1099300 Malus domestica HOM05D005897 ORTHO05D007128 3.6e-13 79.3 198 37.4
Medtr4g124850 Medicago truncatula HOM05D005897 ORTHO05D007128 1.1e-12 77.8 185 37.8
Glyma.17G046700 Glycine max HOM05D005897 ORTHO05D007128 3.1e-12 76.3 171 38.0
Psat4g067280 Pisum sativum HOM05D005897 ORTHO05D007128 6.8e-12 75.1 178 36.5
PGSC0003DMG400013552 Solanum tuberosum HOM05D005897 ORTHO05D007128 6.8e-12 75.1 188 33.0
Rhsim03G0226200 Rhododendron simsii HOM05D005897 ORTHO05D007128 7.5e-11 71.6 132 42.4
Eucgr.C03289 Eucalyptus grandis HOM05D005897 ORTHO05D007128 3.7e-10 69.3 192 33.3
AUR62028279 Chenopodium quinoa HOM05D005897 ORTHO05D007128 3.2e-09 66.2 172 36.0
Lalb_Chr11g0074041 Lupinus albus HOM05D005897 ORTHO05D007128 4.1e-09 65.9 169 36.7
Lalb_Chr23g0276271 Lupinus albus HOM05D005897 ORTHO05D007128 2.0e-08 63.5 179 31.3
MBI19_g18108_MAGBIO Magnolia biondii HOM05D005897 ORTHO05D007128 3.5e-08 62.8 210 31.4
vmacro15871 Vaccinium macrocarpon HOM05D000200 ORTHO05D000262 4.6e-08 62.4 48 60.4
TPR.G11456 Trifolium pratense HOM05D005897 ORTHO05D007128 1.1e-06 57.8 184 30.4
Zm00001eb313970 Zea mays HOM05D041184 ORTHO05D037194 2.5e-06 56.6 208 28.8
Actinidia38489 Actinidia chinensis HOM05D005897 ORTHO05D007128 5.6e-06 55.5 143 37.8
Aqoxy7G00993 Aquilegia oxysepala HOM05D005897 ORTHO05D007128 7.3e-06 55.1 206 24.8
PSO448G0001 Papaver somniferum HOM05D005897 ORTHO05D007128 7.3e-06 55.1 204 27.0
HPP92_004170 Vanilla planifolia HOM05D005897 ORTHO05D007128 9.5e-06 54.7 106 34.9


User provided reference genes

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