Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0017552 Camellia sinensis var. sinensis HOM05D001401 ORTHO05D006368 9.7e-135 483.8 305 100.0
Dinv42099 Davidia involucrata HOM05D001401 ORTHO05D006368 2.9e-94 349.4 312 74.7
vmacro02151 Vaccinium macrocarpon HOM05D001401 ORTHO05D006368 6.4e-94 348.2 310 64.2
Dinv23564 Davidia involucrata HOM05D001401 ORTHO05D006368 2.3e-91 339.7 305 78.4
Actinidia27915 Actinidia chinensis HOM05D001401 ORTHO05D006368 8.9e-88 327.8 321 63.6
Rhsim11G0172600 Rhododendron simsii HOM05D000554 ORTHO05D002829 3.8e-86 322.4 219 76.7
Hma1.2p1_0584F.1_g183440 Hydrangea macrophylla HOM05D001401 ORTHO05D006368 5.6e-82 308.5 307 57.0
TAR628G1386 Trochodendron aralioides HOM05D001401 ORTHO05D006368 1.6e-76 290.4 305 53.8
Actinidia00491 Actinidia chinensis HOM05D001401 ORTHO05D006368 1.0e-75 287.7 314 56.7
TAR381G0019 Trochodendron aralioides HOM05D001401 ORTHO05D006368 2.8e-73 279.6 305 54.4
DCAR_029001 Daucus carota HOM05D001401 ORTHO05D006368 3.6e-73 279.3 305 53.1
Lj9P365T45 Lonicera japonica HOM05D001401 ORTHO05D006368 1.4e-72 277.3 220 68.2
QL11p037824 Quercus lobata HOM05D001401 ORTHO05D006368 1.4e-72 277.3 338 49.1
Haze_02430 Corylus avellana HOM05D001401 ORTHO05D006368 1.8e-72 276.9 308 60.1
CiPaw.05G060100 Carya illinoinensis HOM05D001401 ORTHO05D006368 9.0e-72 274.6 308 56.2
Nitab4.5_0003816g0020 Nicotiana tabacum HOM05D001401 ORTHO05D006368 1.3e-70 270.8 305 50.2
MSTRG.5386 Avicennia marina HOM05D001401 ORTHO05D006368 6.4e-70 268.5 308 57.1
QL11p040047 Quercus lobata HOM05D001401 ORTHO05D006368 1.9e-69 266.9 217 65.4
Nitab4.5_0004280g0010 Nicotiana tabacum HOM05D001401 ORTHO05D006368 5.4e-69 265.4 316 48.7
Lj3g0025450 Lotus japonicus HOM05D001401 ORTHO05D006368 1.2e-68 264.2 313 53.4
VMungo1127G1180 Vigna mungo HOM05D001401 ORTHO05D006368 2.1e-68 263.5 312 48.4
MSTRG.20113 Avicennia marina HOM05D001401 ORTHO05D006368 6.0e-68 261.9 307 49.8
Peaxi162Scf00016g01140 Petunia axillaris HOM05D001401 ORTHO05D006368 7.9e-68 261.5 307 48.2
Ciclev10028944m.g Citrus clementina HOM05D001401 ORTHO05D006368 1.0e-67 261.2 305 49.8
Prupe.8G107000 Prunus persica HOM05D001401 ORTHO05D006368 1.3e-67 260.8 306 58.5
Medtr4g068880 Medicago truncatula HOM05D001401 ORTHO05D006368 1.8e-67 260.4 308 51.3
Glyma.12G046700 Glycine max HOM05D001401 ORTHO05D006368 3.0e-67 259.6 306 48.4
Thecc.02G031200 Theobroma cacao HOM05D001401 ORTHO05D006368 3.0e-67 259.6 332 51.5
Oeu034083.1 Olea europaea HOM05D001401 ORTHO05D006368 6.7e-67 258.5 307 51.1
SalBow6G2648 Salvia bowleyana HOM05D001401 ORTHO05D006368 8.7e-67 258.1 305 56.4
Glyma.11G121600 Glycine max HOM05D001401 ORTHO05D006368 1.5e-66 257.3 312 51.0
Nn5g29458 Nelumbo nucifera HOM05D001401 ORTHO05D006368 1.9e-66 256.9 305 50.2
Aqoxy6G00969 Aquilegia oxysepala HOM05D001401 ORTHO05D006368 2.5e-66 256.5 305 49.2
RcHm_v2.0_Chr6g0262181 Rosa chinensis HOM05D001401 ORTHO05D006368 4.3e-66 255.8 305 48.9
MD05G1071000 Malus domestica HOM05D001401 ORTHO05D006368 7.4e-66 255.0 305 52.8
Cfa021516 Carpinus fangiana HOM05D001401 ORTHO05D006368 9.6e-66 254.6 219 62.6
Cc02_g18020 Coffea canephora HOM05D001401 ORTHO05D006368 1.3e-65 254.2 306 50.3
Psat7g205720 Pisum sativum HOM05D001401 ORTHO05D006368 1.6e-65 253.8 310 48.1
Phvul.011G048500 Phaseolus vulgaris HOM05D001401 ORTHO05D006368 4.8e-65 252.3 312 46.8
TPR.G28096 Trifolium pratense HOM05D001401 ORTHO05D006368 4.8e-65 252.3 309 57.0
arahy.Tifrunner.gnm1.ann1.U2ETAV Arachis hypogaea HOM05D001401 ORTHO05D006368 6.9e-64 248.4 309 46.9
Medtr0026s0200 Medicago truncatula HOM05D001401 ORTHO05D006368 6.9e-64 248.4 220 57.3
Manes.15G147100 Manihot esculenta HOM05D001401 ORTHO05D006368 9.0e-64 248.1 328 46.0
Sopen01g051420 Solanum pennellii HOM05D001401 ORTHO05D006368 9.9e-63 244.6 305 47.2
PGSC0003DMG400025176 Solanum tuberosum HOM05D001401 ORTHO05D006368 1.7e-62 243.8 305 47.5
ECA234G2696 Erigeron canadensis HOM05D000324 ORTHO05D001014 2.2e-62 243.4 304 50.0
HanXRQChr10g0307141 Helianthus annuus HOM05D001401 ORTHO05D006368 2.2e-62 243.4 306 47.7
Solyc01g109260.3 Solanum lycopersicum HOM05D001401 ORTHO05D006368 2.2e-62 243.4 305 47.2
Manes.17G098401 Manihot esculenta HOM05D001401 ORTHO05D006368 3.8e-62 242.7 328 47.3
CAN.G322.101 Capsicum annuum HOM05D001401 ORTHO05D006368 6.4e-62 241.9 305 46.6
Ca_20836_v3 Cicer arietinum L. HOM05D001401 ORTHO05D006368 1.1e-61 241.1 306 47.1
FAN20G2914 Fragaria x ananassa HOM05D001401 ORTHO05D006368 2.4e-61 240.0 305 47.2
Lalb_Chr01g0002831 Lupinus albus HOM05D001401 ORTHO05D006368 2.4e-61 240.0 313 47.9
Cfa021524 Carpinus fangiana HOM05D001401 ORTHO05D002222 5.5e-61 238.8 212 61.3
TWI31G0569 Tripterygium wilfordii HOM05D001401 ORTHO05D002222 5.5e-61 238.8 315 48.9
FAN24G0528 Fragaria x ananassa HOM05D001401 ORTHO05D006368 1.2e-60 237.7 305 56.4
Lsat_1_v5_gn_5_118161 Lactuca sativa HOM05D001401 ORTHO05D006368 1.2e-60 237.7 306 48.7
Migut.N01216 Erythranthe guttata HOM05D001401 ORTHO05D006368 1.6e-60 237.3 306 48.4
Gohir.A01G181100 Gossypium hirsutum HOM05D001401 ORTHO05D006368 1.6e-60 237.3 316 46.8
TWI75G1696 Tripterygium wilfordii HOM05D001401 ORTHO05D006368 1.6e-60 237.3 315 50.2
CANSAT25G1485 Cannabis sativa HOM05D001401 ORTHO05D006368 2.7e-60 236.5 306 51.6
MELO3C021952.2 Cucumis melo HOM05D001401 ORTHO05D002222 2.7e-60 236.5 307 45.0
Duzib132G0928 Durio zibethinus HOM05D001401 ORTHO05D006368 3.5e-60 236.1 218 59.2
PSO700G0268 Papaver somniferum HOM05D001401 ORTHO05D006368 3.5e-60 236.1 305 47.2
ClCG09G017860 Citrullus lanatus HOM05D001401 ORTHO05D006368 7.9e-60 235.0 309 51.5
Eucgr.I01238 Eucalyptus grandis HOM05D001401 ORTHO05D006368 1.0e-59 234.6 308 59.4
Potri.004G149900 Populus trichocarpa HOM05D001401 ORTHO05D006368 1.0e-59 234.6 326 46.0
FvH4_2g07780 Fragaria vesca HOM05D001401 ORTHO05D006368 1.3e-59 234.2 305 56.1
Gohir.D01G172200 Gossypium hirsutum HOM05D001401 ORTHO05D006368 3.0e-59 233.0 316 46.2
PSO170G2675 Papaver somniferum HOM05D001401 ORTHO05D006368 3.0e-59 233.0 305 46.6
Gorai.002G213800 Gossypium raimondii HOM05D001401 ORTHO05D006368 5.1e-59 232.3 316 45.9
AUR62011378 Chenopodium quinoa HOM05D001401 ORTHO05D006368 8.7e-59 231.5 305 45.6
COL.COLO4_17797 Corchorus olitorius HOM05D000370 ORTHO05D001335 8.7e-59 231.5 218 57.8
PSO541G5534 Papaver somniferum HOM05D001401 ORTHO05D006368 1.1e-58 231.1 305 47.2
Duzib248G1632 Durio zibethinus HOM05D001401 ORTHO05D006368 5.6e-58 228.8 345 42.9
Hund06213 Selenicereus undatus HOM05D001401 ORTHO05D006368 5.6e-58 228.8 308 45.8
CsaV3_2G014470 Cucumis sativus L. HOM05D001401 ORTHO05D006368 7.4e-58 228.4 309 43.7
Lalb_Chr03g0025871 Lupinus albus HOM05D001401 ORTHO05D006368 9.6e-58 228.0 309 46.6
PSO675G0936 Papaver somniferum HOM05D001401 ORTHO05D006368 9.6e-58 228.0 305 45.9
Potri.009G111000 Populus trichocarpa HOM05D001401 ORTHO05D006368 1.6e-57 227.3 326 45.1
AUR62016681 Chenopodium quinoa HOM05D001401 ORTHO05D006368 3.7e-57 226.1 305 44.9
TWI79G1069 Tripterygium wilfordii HOM05D001401 ORTHO05D002222 6.2e-57 225.3 313 53.0
Sabra09G0084600 Salix brachista HOM05D001401 ORTHO05D006368 1.8e-56 223.8 323 45.2
FAN15G1840 Fragaria x ananassa HOM05D001401 ORTHO05D006368 2.4e-56 223.4 218 56.4
Migut.B00279 Erythranthe guttata HOM05D001401 ORTHO05D006368 9.0e-56 221.5 309 45.6
Sed0001686 Sechium edule HOM05D001401 ORTHO05D006368 9.0e-56 221.5 305 43.9
Oeu027593.1 Olea europaea HOM05D001574 ORTHO05D006368 1.5e-55 220.7 280 48.6
AT2G16070 Arabidopsis thaliana HOM05D001401 ORTHO05D006368 3.4e-55 219.5 316 43.0
Sed0023769 Sechium edule HOM05D001401 ORTHO05D006368 4.5e-55 219.2 307 45.6
Hund00301 Selenicereus undatus HOM05D001401 ORTHO05D006368 1.3e-54 217.6 312 44.9
Cpa.g.sc62.97 Carica papaya HOM05D001401 ORTHO05D006368 2.2e-54 216.9 328 46.3
CsaV3_7G010190 Cucumis sativus L. HOM05D001401 ORTHO05D006368 2.9e-54 216.5 219 53.9
Sc08g0000270 Simmondsia chinensis HOM05D001401 ORTHO05D006368 1.4e-53 214.2 305 45.6
MELO3C018410.2 Cucumis melo HOM05D001401 ORTHO05D006368 4.2e-53 212.6 219 53.0
Sabra04G0099700 Salix brachista HOM05D001401 ORTHO05D006368 5.5e-53 212.2 219 56.2
Carub.0003s2988 Capsella rubella HOM05D001401 ORTHO05D006368 2.7e-52 209.9 323 42.1
MBI16_g36202_MAGBIO Magnolia biondii HOM05D001401 ORTHO05D002222 2.7e-52 209.9 215 60.0
Atru.chr5.2919 Acer truncatum HOM05D001401 ORTHO05D006368 6.0e-52 208.8 311 52.7
CARHR106370 Cardamine hirsuta HOM05D001401 ORTHO05D006368 7.9e-52 208.4 316 45.3
Aa31LG8G13520 Aethionema arabicum HOM05D001401 ORTHO05D006368 1.3e-51 207.6 308 41.2
Sp3g29340 Schrenkiella parvula HOM05D001401 ORTHO05D006368 1.8e-51 207.2 322 42.5
PGR042G1488 Punica granatum HOM05D001401 ORTHO05D006368 2.3e-51 206.8 310 52.3
Ah.01g006390 Amaranthus hybridus HOM05D001401 ORTHO05D006368 5.1e-51 205.7 305 43.3
ATR0733G254 Amborella trichopoda HOM05D001401 ORTHO05D006368 8.7e-51 204.9 324 41.4
THA.LOC104807334 Tarenaya hassleriana HOM05D001401 ORTHO05D006368 1.1e-50 204.5 321 43.3
Hund00294 Selenicereus undatus HOM05D001401 ORTHO05D006368 9.7e-50 201.4 304 43.8
ClCG02G005370 Citrullus lanatus HOM05D001401 ORTHO05D006368 3.7e-49 199.5 219 51.6
A07p04770 Brassica napus HOM05D001401 ORTHO05D006368 4.1e-48 196.1 308 41.6
C07p07640 Brassica napus HOM05D001401 ORTHO05D006368 4.1e-48 196.1 310 44.2
BolC7t41185H Brassica oleracea HOM05D001401 ORTHO05D006368 4.1e-48 196.1 310 44.2
BraA07t28264Z Brassica rapa HOM05D001401 ORTHO05D006368 4.1e-48 196.1 308 41.6
Thhalv10022794m.g Eutrema salsugineum HOM05D001401 ORTHO05D006368 5.3e-48 195.7 316 42.7
Sed0001319 Sechium edule HOM05D001401 ORTHO05D006368 1.3e-46 191.0 219 48.4
A03p45690 Brassica napus HOM05D001401 ORTHO05D006368 4.2e-45 186.0 307 42.0
BcaC01g03041 Brassica carinata HOM05D001401 ORTHO05D006368 5.5e-45 185.7 323 39.3
C03p56790 Brassica napus HOM05D001401 ORTHO05D006368 5.5e-45 185.7 323 39.3
BolC3t17961H Brassica oleracea HOM05D001401 ORTHO05D006368 5.5e-45 185.7 323 39.3
SGA_v2.0_scaffold58G20583 Striga asiatica HOM05D001401 ORTHO05D006368 1.2e-44 184.5 306 41.5
BcaB08g34633 Brassica carinata HOM05D001401 ORTHO05D006368 2.1e-44 183.7 318 41.5
BraA03t13701Z Brassica rapa HOM05D001401 ORTHO05D006368 2.7e-44 183.3 308 42.2
Ah.01g019700 Amaranthus hybridus HOM05D001401 ORTHO05D002222 3.9e-43 179.5 210 49.5
EL10Ac9g21774 Beta vulgaris HOM05D001401 ORTHO05D002222 5.1e-43 179.1 275 50.9
BcaC06g36113 Brassica carinata HOM05D001401 ORTHO05D006368 7.4e-42 175.3 310 41.6
CDE01G0160 Ceratophyllum demersum HOM05D001401 ORTHO05D006368 1.3e-41 174.5 306 41.2
Os07g0123300 Oryza sativa ssp. japonica HOM05D001401 ORTHO05D006368 2.2e-38 163.7 219 43.4
GSVIVG01031902001 Vitis vinifera HOM05D001401 ORTHO05D006368 9.4e-37 158.3 166 60.8
SEGI_00142 Sequoiadendron giganteum HOM05D001401 ORTHO05D006368 2.7e-36 156.8 316 38.6
CDE04G2456 Ceratophyllum demersum HOM05D001401 ORTHO05D006368 4.6e-36 156.0 307 38.4
THA.LOC104820173 Tarenaya hassleriana HOM05D001401 ORTHO05D006368 1.0e-35 154.8 222 43.7
A09p10890 Brassica napus HOM05D001401 ORTHO05D006368 3.3e-34 149.8 317 36.3
Lj1C312T0 Lonicera japonica HOM05D001401 ORTHO05D006368 1.1e-32 144.8 133 59.4
Zm00001eb299190 Zea mays HOM05D001401 ORTHO05D006368 2.5e-29 133.7 235 36.6
TAR623G1717 Trochodendron aralioides HOM05D001401 ORTHO05D006368 5.7e-26 122.5 89 70.8
Nn1g05138 Nelumbo nucifera HOM05D001401 ORTHO05D006368 5.9e-23 112.5 156 46.2
C09p12860 Brassica napus HOM05D001401 ORTHO05D006368 1.9e-21 107.5 307 33.2
BolC9t54175H Brassica oleracea HOM05D001401 ORTHO05D006368 1.9e-21 107.5 307 33.2
BcaNung01772 Brassica carinata HOM05D001401 ORTHO05D006368 4.7e-20 102.8 203 45.8
Mapoly0001s0328 Marchantia polymorpha HOM05D001401 ORTHO05D006368 6.7e-19 99.0 246 31.7
CDE02G3784 Ceratophyllum demersum HOM05D001401 ORTHO05D002222 1.5e-18 97.8 120 45.0
Pp3c22_17090 Physcomitrium patens HOM05D001401 ORTHO05D006368 3.1e-16 90.1 374 23.8
Pp3c2_5300 Physcomitrium patens HOM05D001401 ORTHO05D006368 4.1e-16 89.7 256 32.8
BcaB07g31630 Brassica carinata HOM05D006912 ORTHO05D008686 2.7e-15 87.0 153 37.3
SalBow1G1061 Salvia bowleyana HOM05D001999 ORTHO05D001994 2.7e-15 87.0 55 81.8
BraA09t36729Z Brassica rapa HOM05D001401 ORTHO05D006368 4.5e-15 86.3 153 35.9
Pp3c17_18860 Physcomitrium patens HOM05D001401 ORTHO05D006368 3.8e-14 83.2 252 30.2
Pp3c1_32220 Physcomitrium patens HOM05D001401 ORTHO05D006368 6.5e-14 82.4 247 30.0
SEGI_14403 Sequoiadendron giganteum HOM05D001401 ORTHO05D006368 6.5e-14 82.4 254 29.9
Pp3c19_14090 Physcomitrium patens HOM05D001401 ORTHO05D006368 7.2e-13 79.0 282 26.2
AagrBONN_evm.TU.Sc2ySwM_228.2503 Anthoceros agrestis HOM05D001401 ORTHO05D006368 2.6e-10 70.5 230 25.2
BcaC04g23035 Brassica carinata HOM05D001401 ORTHO05D006368 4.4e-10 69.7 90 51.1
unitig_21.g20770 Utricularia gibba HOM05D000370 ORTHO05D001335 2.2e-09 67.4 216 30.6
FAN15G1877 Fragaria x ananassa HOM05D001401 ORTHO05D006368 2.0e-07 60.8 41 70.7
Pp3c18_7150 Physcomitrium patens HOM05D001401 ORTHO05D006368 1.3e-06 58.2 234 25.6


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