Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0017527 Camellia sinensis var. sinensis HOM05D009300 ORTHO05D010234 4.5e-164 581.3 309 100.0
CSS0041515 Camellia sinensis var. sinensis HOM05D009300 ORTHO05D010234 1.5e-114 416.8 265 82.3
CSS0040020 Camellia sinensis var. sinensis HOM05D009300 ORTHO05D010234 5.1e-107 391.7 271 75.6
CSS0001367 Camellia sinensis var. sinensis HOM05D009300 ORTHO05D010234 2.6e-103 379.4 253 76.3
CSS0037204 Camellia sinensis var. sinensis HOM05D009300 ORTHO05D010234 1.4e-85 320.5 340 57.9
CSS0007178 Camellia sinensis var. sinensis HOM05D009300 ORTHO05D010234 4.6e-84 315.5 337 61.7
CSS0047616 Camellia sinensis var. sinensis HOM05D009300 ORTHO05D010234 5.7e-82 308.5 270 68.9
CSS0010902 Camellia sinensis var. sinensis HOM05D009300 ORTHO05D010234 1.4e-77 293.9 342 57.3
Rhsim12G0092900 Rhododendron simsii HOM05D009300 ORTHO05D010234 2.3e-27 127.1 294 34.0
Rhsim01G0128900 Rhododendron simsii HOM05D009300 ORTHO05D010234 3.5e-23 113.2 267 28.1
RhsimUnG0101600 Rhododendron simsii HOM05D009300 ORTHO05D010234 6.6e-22 109.0 295 27.1
Rhsim07G0158800 Rhododendron simsii HOM05D000107 ORTHO05D000062 5.2e-19 99.4 254 29.9
vmacro00531 Vaccinium macrocarpon HOM05D009300 ORTHO05D010234 8.9e-19 98.6 320 27.5
vmacro12141 Vaccinium macrocarpon HOM05D009300 ORTHO05D010234 1.5e-18 97.8 321 28.3
Rhsim10G0179100 Rhododendron simsii HOM05D009300 ORTHO05D010234 2.6e-18 97.1 121 49.6
vmacro13454 Vaccinium macrocarpon HOM05D009300 ORTHO05D010234 5.8e-18 95.9 214 33.6
vmacro14328 Vaccinium macrocarpon HOM05D009300 ORTHO05D010234 1.2e-15 88.2 295 26.4
vmacro12139 Vaccinium macrocarpon HOM05D009300 ORTHO05D010234 1.3e-14 84.7 154 37.7
vmacro13356 Vaccinium macrocarpon HOM05D009300 ORTHO05D010234 2.1e-12 77.4 97 43.3
vmacro23182 Vaccinium macrocarpon HOM05D008549 ORTHO05D010234 1.8e-11 74.3 257 21.8
Rhsim07G0185300 Rhododendron simsii HOM05D000107 ORTHO05D003213 2.4e-11 73.9 96 44.8
vmacro17806 Vaccinium macrocarpon HOM05D008549 ORTHO05D010234 4.0e-11 73.2 257 21.8
CSS0036223 Camellia sinensis var. sinensis HOM05D009300 ORTHO05D010234 6.9e-11 72.4 56 58.9
CSS0020531 Camellia sinensis var. sinensis HOM05D000107 ORTHO05D003213 8.9e-11 72.0 55 63.6
Rhsim04G0140300 Rhododendron simsii HOM05D000107 ORTHO05D000062 1.5e-10 71.2 241 30.7
vmacro04245 Vaccinium macrocarpon HOM05D017338 ORTHO05D010234 3.4e-10 70.1 249 26.9
RhsimUnG0074200 Rhododendron simsii HOM05D000107 ORTHO05D000062 4.4e-10 69.7 363 24.0
CSS0029753 Camellia sinensis var. sinensis HOM05D007798 ORTHO05D009882 5.8e-10 69.3 249 24.9
CSS0034635 Camellia sinensis var. sinensis HOM05D009300 ORTHO05D003213 1.7e-09 67.8 55 61.8
CSS0047376 Camellia sinensis var. sinensis HOM05D007798 ORTHO05D009882 1.7e-09 67.8 248 24.6
Rhsim04G0111400 Rhododendron simsii HOM05D009565 ORTHO05D012252 1.7e-09 67.8 180 27.8
CSS0008205 Camellia sinensis var. sinensis HOM05D007798 ORTHO05D009882 2.9e-09 67.0 248 24.6
CSS0021747 Camellia sinensis var. sinensis HOM05D007798 ORTHO05D009882 2.9e-09 67.0 248 24.2
CSS0033268 Camellia sinensis var. sinensis HOM05D007798 ORTHO05D009882 2.9e-09 67.0 248 24.6
Hma1.2p1_0101F.1_g049380 Hydrangea macrophylla HOM05D005507 ORTHO05D009882 3.8e-09 66.6 120 35.8
CSS0004305 Camellia sinensis var. sinensis HOM05D017338 ORTHO05D010234 4.9e-09 66.2 253 25.3
CSS0034332 Camellia sinensis var. sinensis HOM05D007798 ORTHO05D009882 6.4e-09 65.9 248 24.6
CSS0011165 Camellia sinensis var. sinensis HOM05D009300 ORTHO05D010234 1.9e-08 64.3 70 51.4
CSS0019851 Camellia sinensis var. sinensis HOM05D009300 ORTHO05D010234 1.9e-08 64.3 70 51.4
Rhsim06G0049000 Rhododendron simsii HOM05D009300 ORTHO05D010234 1.9e-08 64.3 103 39.8
Rhsim09G0079100 Rhododendron simsii HOM05D009565 ORTHO05D012252 1.9e-08 64.3 176 27.3
RhsimUnG0025000 Rhododendron simsii HOM05D007798 ORTHO05D009882 2.4e-08 63.9 94 34.0
Rhsim06G0127000 Rhododendron simsii HOM05D009565 ORTHO05D012252 4.2e-08 63.2 238 24.8
Hma1.2p1_0613F.1_g189140 Hydrangea macrophylla HOM05D007798 ORTHO05D009882 7.1e-08 62.4 131 31.3
Rhsim05G0212100 Rhododendron simsii HOM05D007798 ORTHO05D009882 7.1e-08 62.4 94 33.0
Rhsim10G0126600 Rhododendron simsii HOM05D009565 ORTHO05D012252 9.3e-08 62.0 238 24.8
Rhsim11G0014100 Rhododendron simsii HOM05D009300 ORTHO05D010234 9.3e-08 62.0 74 47.3
MBI19_g01025_MAGBIO Magnolia biondii HOM05D000791 ORTHO05D000669 1.6e-07 61.2 149 28.2
Actinidia33688 Actinidia chinensis HOM05D007798 ORTHO05D009882 2.1e-07 60.8 123 34.1
CSS0048637 Camellia sinensis var. sinensis HOM05D021745 ORTHO05D010234 2.1e-07 60.8 72 37.5
MBI16_g20833_MAGBIO Magnolia biondii HOM05D000791 ORTHO05D000669 2.1e-07 60.8 152 28.9
Actinidia39405 Actinidia chinensis HOM05D007798 ORTHO05D009882 2.7e-07 60.5 96 36.5
CSS0002050 Camellia sinensis var. sinensis HOM05D000107 ORTHO05D003213 2.7e-07 60.5 59 52.5
CiPaw.10G065700 Carya illinoinensis HOM05D000791 ORTHO05D000669 2.7e-07 60.5 204 25.5
MBI07_g22513_MAGBIO Magnolia biondii HOM05D000791 ORTHO05D000669 2.7e-07 60.5 152 27.6
MBI13_g12520_MAGBIO Magnolia biondii HOM05D000791 ORTHO05D000669 3.5e-07 60.1 151 30.5
MBI14_g01819_MAGBIO Magnolia biondii HOM05D000791 ORTHO05D000669 6.0e-07 59.3 152 28.9
MBI19_g18851_MAGBIO Magnolia biondii HOM05D000791 ORTHO05D000669 6.0e-07 59.3 152 27.0
Rhsim01G0162400 Rhododendron simsii HOM05D000107 ORTHO05D000062 6.0e-07 59.3 149 27.5
Rhsim10G0213800 Rhododendron simsii HOM05D008549 ORTHO05D010234 6.0e-07 59.3 134 29.1
MBI19_g18856_MAGBIO Magnolia biondii HOM05D000791 ORTHO05D000669 7.8e-07 58.9 152 28.3
Rhsim01G0162500 Rhododendron simsii HOM05D000107 ORTHO05D000062 1.0e-06 58.5 134 28.4
Rhsim03G0202300 Rhododendron simsii HOM05D017301 ORTHO05D000669 1.0e-06 58.5 225 27.6
Rhsim06G0120600 Rhododendron simsii HOM05D000107 ORTHO05D000062 1.0e-06 58.5 94 34.0
Actinidia04231 Actinidia chinensis HOM05D007798 ORTHO05D009882 1.3e-06 58.2 99 36.4
CSS0019606 Camellia sinensis var. sinensis HOM05D021745 ORTHO05D010234 1.7e-06 57.8 72 34.7
MBI13_g26213_MAGBIO Magnolia biondii HOM05D000791 ORTHO05D000669 1.7e-06 57.8 152 27.0
MBI07_g41667_MAGBIO Magnolia biondii HOM05D000791 ORTHO05D000669 2.3e-06 57.4 152 28.3
MBI11_g33696_MAGBIO Magnolia biondii HOM05D000791 ORTHO05D000669 2.3e-06 57.4 153 28.1
CSS0002056 Camellia sinensis var. sinensis HOM05D021745 ORTHO05D010234 3.0e-06 57.0 72 34.7
CSS0009398 Camellia sinensis var. sinensis HOM05D021745 ORTHO05D010234 3.0e-06 57.0 72 34.7
CSS0045362 Camellia sinensis var. sinensis HOM05D014646 ORTHO05D010234 3.9e-06 56.6 51 52.9
MBI04_g25418_MAGBIO Magnolia biondii HOM05D000791 ORTHO05D000669 3.9e-06 56.6 153 28.8
MBI14_g16528_MAGBIO Magnolia biondii HOM05D000791 ORTHO05D000669 3.9e-06 56.6 109 31.2
Actinidia03841 Actinidia chinensis HOM05D007798 ORTHO05D009882 5.1e-06 56.2 128 34.4
Rhsim03G0038000 Rhododendron simsii HOM05D009565 ORTHO05D012252 5.1e-06 56.2 248 23.4
QL02p083298 Quercus lobata HOM05D007798 ORTHO05D009882 6.6e-06 55.8 244 23.0
MBI10_g06414_MAGBIO Magnolia biondii HOM05D000791 ORTHO05D000669 8.7e-06 55.5 136 29.4
MBI14_g25533_MAGBIO Magnolia biondii HOM05D000791 ORTHO05D000669 8.7e-06 55.5 152 28.3
MBI17_g38326_MAGBIO Magnolia biondii HOM05D000791 ORTHO05D000669 8.7e-06 55.5 146 28.8
vmacro01281 Vaccinium macrocarpon HOM05D017301 ORTHO05D000669 8.7e-06 55.5 205 22.9


User provided reference genes

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