Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0017513 Camellia sinensis var. sinensis HOM05D007250 ORTHO05D009162 3.8e-132 474.9 254 100.0
CSS0024774 Camellia sinensis var. sinensis HOM05D007250 ORTHO05D009162 3.1e-110 402.1 203 99.0
Actinidia12769 Actinidia chinensis HOM05D007250 ORTHO05D000003 2.5e-99 365.9 245 75.1
vmacro11701 Vaccinium macrocarpon HOM05D007250 ORTHO05D009162 7.9e-98 360.9 246 75.6
Rhsim06G0242100 Rhododendron simsii HOM05D007250 ORTHO05D009162 4.1e-94 348.6 277 67.5
Hma1.2p1_0151F.1_g067310 Hydrangea macrophylla HOM05D007250 ORTHO05D009162 6.1e-90 334.7 205 79.5
Dinv19589 Davidia involucrata HOM05D007250 ORTHO05D009162 4.1e-86 322.0 195 81.0
HanXRQChr05g0160551 Helianthus annuus HOM05D007250 ORTHO05D009162 5.3e-86 321.6 209 71.8
Gorai.013G142400 Gossypium raimondii HOM05D007250 ORTHO05D009162 1.0e-84 317.4 208 72.6
Manes.06G175800 Manihot esculenta HOM05D007250 ORTHO05D009162 6.5e-84 314.7 209 69.9
Lj2A15T78 Lonicera japonica HOM05D007250 ORTHO05D009162 8.5e-84 314.3 202 73.8
Duzib213G0161 Durio zibethinus HOM05D007250 ORTHO05D009162 1.9e-83 313.2 209 71.8
Ciclev10005586m.g Citrus clementina HOM05D007250 ORTHO05D009162 3.2e-83 312.4 215 68.4
ClCG02G018630 Citrullus lanatus HOM05D007250 ORTHO05D009162 4.2e-83 312.0 215 69.8
Lsat_1_v5_gn_7_75520 Lactuca sativa HOM05D007250 ORTHO05D009162 4.2e-83 312.0 246 61.4
Nitab4.5_0003777g0030 Nicotiana tabacum HOM05D007250 ORTHO05D009162 2.1e-82 309.7 211 69.7
Oeu034977.1 Olea europaea HOM05D007250 ORTHO05D009162 2.1e-82 309.7 231 64.9
MSTRG.16100 Avicennia marina HOM05D007250 ORTHO05D009162 2.7e-82 309.3 207 70.5
Glyma.15G260800 Glycine max HOM05D007250 ORTHO05D009162 4.7e-82 308.5 210 70.5
PSO541G5100 Papaver somniferum HOM05D007250 ORTHO05D009162 6.1e-82 308.1 207 69.1
Solyc10g005540.4 Solanum lycopersicum HOM05D007250 ORTHO05D009162 8.0e-82 307.8 211 70.1
Medtr1g060720 Medicago truncatula HOM05D007250 ORTHO05D009162 3.0e-81 305.8 210 70.5
Potri.007G069400 Populus trichocarpa HOM05D007250 ORTHO05D009162 3.0e-81 305.8 207 70.0
Phvul.005G050100 Phaseolus vulgaris HOM05D007250 ORTHO05D009162 5.2e-81 305.1 210 70.0
GSVIVG01036780001 Vitis vinifera HOM05D007250 ORTHO05D009162 5.2e-81 305.1 209 69.4
Gohir.D13G127200 Gossypium hirsutum HOM05D007250 ORTHO05D009162 8.8e-81 304.3 203 71.4
Sabra07G0056900 Salix brachista HOM05D007250 ORTHO05D009162 1.5e-80 303.5 206 68.9
Sopen10g001520 Solanum pennellii HOM05D007250 ORTHO05D009162 2.0e-80 303.1 211 68.7
TWI38G0063 Tripterygium wilfordii HOM05D007250 ORTHO05D009162 2.6e-80 302.8 208 67.8
Lalb_Chr25g0284601 Lupinus albus HOM05D007250 ORTHO05D009162 3.3e-80 302.4 210 69.0
Sed0012120 Sechium edule HOM05D007250 ORTHO05D009162 5.7e-80 301.6 208 68.8
unitig_748.g7850 Utricularia gibba HOM05D007250 ORTHO05D001497 5.7e-80 301.6 207 66.2
Ca_03591_v3 Cicer arietinum L. HOM05D007250 ORTHO05D009162 9.7e-80 300.8 209 69.4
Thecc.07G179900 Theobroma cacao HOM05D007250 ORTHO05D009162 9.7e-80 300.8 210 68.6
Lj3g0020784 Lotus japonicus HOM05D007250 ORTHO05D009162 2.2e-79 299.7 210 68.6
Nitab4.5_0008957g0010 Nicotiana tabacum HOM05D007250 ORTHO05D009162 2.2e-79 299.7 227 64.8
CiPaw.11G061700 Carya illinoinensis HOM05D007250 ORTHO05D009162 3.7e-79 298.9 209 66.5
Nn3g20174 Nelumbo nucifera HOM05D007250 ORTHO05D009162 3.7e-79 298.9 207 67.1
Peaxi162Scf00114g00116 Petunia axillaris HOM05D007250 ORTHO05D009162 3.7e-79 298.9 210 68.1
PGSC0003DMG400011276 Solanum tuberosum HOM05D007250 ORTHO05D009162 3.7e-79 298.9 211 68.2
Thhalv10008448m.g Eutrema salsugineum HOM05D007250 ORTHO05D009162 4.8e-79 298.5 211 66.4
QL04p088484 Quercus lobata HOM05D007250 ORTHO05D009162 6.3e-79 298.1 208 70.7
QL04p088943 Quercus lobata HOM05D007250 ORTHO05D009162 6.3e-79 298.1 208 70.7
Haze_07815 Corylus avellana HOM05D007250 ORTHO05D009162 8.2e-79 297.7 209 68.9
CsaV3_6G013550 Cucumis sativus L. HOM05D007250 ORTHO05D009162 8.2e-79 297.7 206 69.9
Carub.0001s1619 Capsella rubella HOM05D007250 ORTHO05D009162 1.1e-78 297.4 209 67.0
CAN.G492.76 Capsicum annuum HOM05D007250 ORTHO05D009162 1.1e-78 297.4 209 67.5
AT1G16445 Arabidopsis thaliana HOM05D007250 ORTHO05D009162 1.6e-77 293.5 211 65.9
BraA09t41463Z Brassica rapa HOM05D007250 ORTHO05D009162 3.5e-77 292.4 211 64.9
CARHR016920 Cardamine hirsuta HOM05D007250 ORTHO05D009162 5.9e-77 291.6 208 65.9
AL1G28580 Arabidopsis lyrata HOM05D007250 ORTHO05D009162 7.7e-77 291.2 211 65.4
Aa31LG7G990 Aethionema arabicum HOM05D007250 ORTHO05D009162 1.0e-76 290.8 208 64.9
A09p60900 Brassica napus HOM05D007250 ORTHO05D009162 1.7e-76 290.0 211 64.5
MD05G1040700 Malus domestica HOM05D007250 ORTHO05D009162 6.5e-76 288.1 209 65.1
CANSAT56G4154 Cannabis sativa HOM05D007250 ORTHO05D009162 8.5e-76 287.7 207 65.2
ATR0165G048 Amborella trichopoda HOM05D007250 ORTHO05D009162 1.5e-75 287.0 207 61.8
C08p44490 Brassica napus HOM05D007250 ORTHO05D009162 7.2e-75 284.6 211 64.5
Sp1g14600 Schrenkiella parvula HOM05D007250 ORTHO05D009162 7.2e-75 284.6 211 63.5
Eucgr.F04459 Eucalyptus grandis HOM05D007250 ORTHO05D009162 8.0e-74 281.2 204 64.7
AUR62018167 Chenopodium quinoa HOM05D007250 ORTHO05D009162 6.8e-73 278.1 206 63.1
RcHm_v2.0_Chr6g0272151 Rosa chinensis HOM05D007250 ORTHO05D009162 6.8e-73 278.1 209 65.1
BolC8t51991H Brassica oleracea HOM05D007250 ORTHO05D009162 8.8e-73 277.7 221 62.0
FvH4_2g12161 Fragaria vesca HOM05D007250 ORTHO05D009162 8.8e-73 277.7 209 63.6
Zm00001eb292510 Zea mays HOM05D007250 ORTHO05D009162 7.5e-72 274.6 205 62.9
Os05g0511700 Oryza sativa ssp. japonica HOM05D007250 ORTHO05D009162 5.4e-70 268.5 206 58.7
Gohir.A13G123300 Gossypium hirsutum HOM05D007250 ORTHO05D009162 1.2e-69 267.3 237 57.8
Psat1g013800 Pisum sativum HOM05D007250 ORTHO05D009162 5.9e-69 265.0 187 67.9
MBI18_g10574_MAGBIO Magnolia biondii HOM05D007250 ORTHO05D009162 1.1e-67 260.8 182 67.6
Atru.chr1.107 Acer truncatum HOM05D007250 ORTHO05D009162 5.5e-67 258.5 207 62.8
arahy.Tifrunner.gnm1.ann1.QIZU11 Arachis hypogaea HOM05D007250 ORTHO05D009162 9.4e-67 257.7 182 67.6
CDE01G0022 Ceratophyllum demersum HOM05D007250 ORTHO05D009162 1.2e-66 257.3 207 58.0
Aqoxy6G01374 Aquilegia oxysepala HOM05D007250 ORTHO05D009162 8.0e-66 254.6 212 58.5
AUR62042431 Chenopodium quinoa HOM05D007250 ORTHO05D009162 1.8e-65 253.4 191 61.3
HPP92_000965 Vanilla planifolia HOM05D007250 ORTHO05D009162 9.8e-64 247.7 211 55.5
TAR627G0140 Trochodendron aralioides HOM05D007250 ORTHO05D009162 6.3e-63 245.0 169 68.6
COL.COLO4_32252 Corchorus olitorius HOM05D007250 ORTHO05D009162 7.0e-62 241.5 166 70.5
SGA_v2.0_scaffold7G03608 Striga asiatica HOM05D001395 ORTHO05D002039 5.9e-61 238.4 234 53.0
Prupe.8G055300 Prunus persica HOM05D007250 ORTHO05D009162 7.7e-61 238.0 168 67.3
Hund20100 Selenicereus undatus HOM05D007250 ORTHO05D009162 5.0e-60 235.3 172 65.1
arahy.Tifrunner.gnm1.ann1.3NS56Y Arachis hypogaea HOM05D007250 ORTHO05D009162 1.1e-59 234.2 191 61.3
Pp3c16_19260 Physcomitrium patens HOM05D007250 ORTHO05D009162 3.3e-59 232.6 208 53.8
Hma1.2p1_0151F.1_g067320 Hydrangea macrophylla HOM05D007250 ORTHO05D009162 1.2e-58 230.7 141 80.1
FAN20G1272 Fragaria x ananassa HOM05D007250 ORTHO05D009162 7.5e-56 221.5 205 54.6
SMO141G0022 Selaginella moellendorffii HOM05D007250 ORTHO05D009162 3.5e-53 212.6 185 56.2
Cc05_g16330 Coffea canephora HOM05D007250 ORTHO05D009162 4.6e-53 212.2 141 75.9
Mapoly0102s0005 Marchantia polymorpha HOM05D007250 ORTHO05D009162 7.8e-53 211.5 203 49.3
Cpa.g.sc34.15 Carica papaya HOM05D007250 ORTHO05D009162 1.5e-51 207.2 188 57.4
AagrBONN_evm.TU.Sc2ySwM_117.37 Anthoceros agrestis HOM05D007250 ORTHO05D009162 8.0e-50 201.4 199 47.7
PGR031G0704 Punica granatum HOM05D007250 ORTHO05D009162 8.0e-50 201.4 206 51.0
EL10Ac2g03263 Beta vulgaris HOM05D007250 ORTHO05D009162 2.3e-49 199.9 273 44.0
Migut.M01530 Erythranthe guttata HOM05D007250 ORTHO05D009162 8.9e-41 171.4 110 70.9
Hma1.2p1_0616F.1_g189960 Hydrangea macrophylla HOM05D007250 ORTHO05D009162 8.9e-41 171.4 155 60.6
SEGI_10655 Sequoiadendron giganteum HOM05D007250 ORTHO05D009162 4.9e-31 139.0 105 61.9
CSS0048664 Camellia sinensis var. sinensis HOM05D007250 ORTHO05D009162 6.4e-31 138.7 102 72.5
CBR_g32272 Chara braunii HOM05D007250 ORTHO05D009162 3.2e-30 136.3 146 46.6
MCO03G414 Micromonas commoda HOM05D007250 ORTHO05D009162 1.2e-29 134.4 204 38.2
FAN24G3506 Fragaria x ananassa HOM05D007250 ORTHO05D009162 7.8e-29 131.7 92 65.2
Cre12.g517550 Chlamydomonas reinhardtii HOM05D007250 ORTHO05D009162 3.3e-27 126.3 166 41.0
Migut.M01529 Erythranthe guttata HOM05D007250 ORTHO05D009162 2.6e-24 116.7 76 69.7
QL03p068942 Quercus lobata HOM05D007250 ORTHO05D009162 8.4e-23 111.7 208 38.5
PRCOL_00005754 Prasinoderma coloniale HOM05D007250 ORTHO05D009162 1.3e-18 97.8 227 33.0
Sc10g0008800 Simmondsia chinensis HOM05D007250 ORTHO05D009162 1.2e-16 91.3 80 55.0
Mapoly0062s0100 Marchantia polymorpha HOM05D007250 ORTHO05D009162 9.6e-11 71.6 78 42.3
QL04p088027 Quercus lobata HOM05D037085 ORTHO05D009162 1.4e-09 67.8 54 55.6
MELO3C019639.2 Cucumis melo HOM05D007250 ORTHO05D009162 3.4e-08 63.2 41 68.3
VMungo1080G0363 Vigna mungo HOM05D007250 ORTHO05D009162 2.2e-07 60.5 41 65.9
QL04p088276 Quercus lobata HOM05D037085 ORTHO05D009162 1.4e-06 57.8 41 65.9


User provided reference genes

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