Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0017479 Camellia sinensis var. sinensis HOM05D006422 ORTHO05D007992 8.9e-84 313.5 155 100.0
CSS0034711 Camellia sinensis var. sinensis HOM05D006422 ORTHO05D007992 2.2e-74 282.3 155 90.3
Rhsim07G0170200 Rhododendron simsii HOM05D006422 ORTHO05D007992 3.2e-49 198.7 132 73.5
COL.COLO4_18610 Corchorus olitorius HOM05D006422 ORTHO05D007992 4.2e-49 198.4 129 75.2
Solyc08g006160.4 Solanum lycopersicum HOM05D006422 ORTHO05D007992 7.1e-49 197.6 121 78.5
Sopen08g002130 Solanum pennellii HOM05D006422 ORTHO05D007992 9.2e-49 197.2 120 79.2
PGSC0003DMG400009533 Solanum tuberosum HOM05D006422 ORTHO05D007992 1.6e-48 196.4 121 78.5
TAR383G0184 Trochodendron aralioides HOM05D006422 ORTHO05D007992 2.7e-48 195.7 124 76.6
Actinidia03579 Actinidia chinensis HOM05D006422 ORTHO05D007992 3.5e-48 195.3 124 75.0
MBI13_g31531_MAGBIO Magnolia biondii HOM05D006422 ORTHO05D007992 4.6e-48 194.9 122 74.6
Nn1g01726 Nelumbo nucifera HOM05D006422 ORTHO05D007992 4.6e-48 194.9 125 76.0
Dinv10868 Davidia involucrata HOM05D006422 ORTHO05D007992 6.0e-48 194.5 124 77.4
Dinv26550 Davidia involucrata HOM05D006422 ORTHO05D007992 6.0e-48 194.5 124 77.4
CiPaw.07G214400 Carya illinoinensis HOM05D006422 ORTHO05D007992 7.8e-48 194.1 129 73.6
Aqoxy5G03915 Aquilegia oxysepala HOM05D006422 ORTHO05D007992 1.0e-47 193.7 130 70.8
GSVIVG01035544001 Vitis vinifera HOM05D006422 ORTHO05D007992 1.0e-47 193.7 124 76.6
Atru.chr7.2615_Atru.chr7.2616 Acer truncatum HOM05D006422 ORTHO05D007992 1.7e-47 193.0 125 73.6
vmacro05107 Vaccinium macrocarpon HOM05D006422 ORTHO05D007992 2.3e-47 192.6 108 82.4
Lj5g0012981 Lotus japonicus HOM05D006422 ORTHO05D007992 3.0e-47 192.2 123 73.2
Ciclev10009324m.g Citrus clementina HOM05D006422 ORTHO05D007992 8.7e-47 190.7 124 74.2
Duzib168G1765 Durio zibethinus HOM05D006422 ORTHO05D007992 8.7e-47 190.7 123 74.8
Lalb_Chr14g0362181 Lupinus albus HOM05D006422 ORTHO05D007992 8.7e-47 190.7 122 74.6
CANSAT25G0758 Cannabis sativa HOM05D006422 ORTHO05D007992 1.5e-46 189.9 129 71.3
Thecc.09G005200 Theobroma cacao HOM05D006422 ORTHO05D007992 1.9e-46 189.5 124 74.2
Sc09g0007930 Simmondsia chinensis HOM05D006422 ORTHO05D007992 2.5e-46 189.1 129 71.3
MSTRG.11814 Avicennia marina HOM05D006422 ORTHO05D007992 1.3e-45 186.8 121 73.6
Cfa013253 Carpinus fangiana HOM05D006422 ORTHO05D007992 1.3e-45 186.8 124 72.6
THA.LOC104811048 Tarenaya hassleriana HOM05D006422 ORTHO05D007992 1.3e-45 186.8 129 69.0
Migut.A00443 Erythranthe guttata HOM05D006422 ORTHO05D007992 2.1e-45 186.0 121 72.7
Potri.006G276400 Populus trichocarpa HOM05D006422 ORTHO05D007992 2.1e-45 186.0 133 68.4
RcHm_v2.0_Chr6g0312201 Rosa chinensis HOM05D006422 ORTHO05D007992 2.1e-45 186.0 124 71.8
Cc04_g09430 Coffea canephora HOM05D006422 ORTHO05D007992 2.8e-45 185.7 120 74.2
Manes.16G136400 Manihot esculenta HOM05D006422 ORTHO05D007992 3.6e-45 185.3 133 69.2
EL10Ac2g03719 Beta vulgaris HOM05D006422 ORTHO05D007992 4.8e-45 184.9 119 74.8
CAN.G1364.3 Capsicum annuum HOM05D006422 ORTHO05D007992 4.8e-45 184.9 121 73.6
Peaxi162Scf00045g01530 Petunia axillaris HOM05D006422 ORTHO05D007992 4.8e-45 184.9 109 80.7
QL12p024696 Quercus lobata HOM05D006422 ORTHO05D007992 6.2e-45 184.5 124 71.0
Hma1.2p1_0534F.1_g173720 Hydrangea macrophylla HOM05D006422 ORTHO05D007992 8.1e-45 184.1 131 69.5
AUR62020627 Chenopodium quinoa HOM05D006422 ORTHO05D007992 1.4e-44 183.3 131 67.9
TWI34G0909 Tripterygium wilfordii HOM05D006422 ORTHO05D007992 1.4e-44 183.3 132 68.9
Ca_12880_v3 Cicer arietinum L. HOM05D006422 ORTHO05D007992 1.8e-44 183.0 124 68.5
Nitab4.5_0000025g0080 Nicotiana tabacum HOM05D006422 ORTHO05D007992 2.4e-44 182.6 144 66.0
Psat6g032000 Pisum sativum HOM05D006422 ORTHO05D007992 2.4e-44 182.6 123 69.9
Prupe.1G462100 Prunus persica HOM05D006422 ORTHO05D007992 2.4e-44 182.6 124 71.0
Sabra06G0214100 Salix brachista HOM05D006422 ORTHO05D007992 3.1e-44 182.2 133 67.7
MELO3C011201.2 Cucumis melo HOM05D006422 ORTHO05D007992 4.0e-44 181.8 119 73.1
ClCG08G012780 Citrullus lanatus HOM05D006422 ORTHO05D007992 6.9e-44 181.0 116 74.1
PSO017G3510 Papaver somniferum HOM05D006422 ORTHO05D007992 6.9e-44 181.0 125 68.0
FAN20G1184 Fragaria x ananassa HOM05D006422 ORTHO05D007992 9.0e-44 180.6 124 68.5
PSO170G4757 Papaver somniferum HOM05D006422 ORTHO05D007992 9.0e-44 180.6 125 68.0
Medtr1g009980 Medicago truncatula HOM05D006422 ORTHO05D007992 1.2e-43 180.3 124 67.7
FvH4_2g30680 Fragaria vesca HOM05D006422 ORTHO05D007992 1.5e-43 179.9 124 68.5
FAN24G2382 Fragaria x ananassa HOM05D006422 ORTHO05D007992 1.5e-43 179.9 124 68.5
CSS0035518 Camellia sinensis var. sinensis HOM05D006422 ORTHO05D007992 2.0e-43 179.5 140 67.9
Phvul.001G058000 Phaseolus vulgaris HOM05D006422 ORTHO05D007992 2.0e-43 179.5 123 70.7
BcaB08g36552 Brassica carinata HOM05D006422 ORTHO05D007992 2.6e-43 179.1 129 65.1
BcaC04g19400 Brassica carinata HOM05D006422 ORTHO05D007992 2.6e-43 179.1 129 65.1
A10p19790 Brassica napus HOM05D006422 ORTHO05D007992 2.6e-43 179.1 129 65.1
C09p56110 Brassica napus HOM05D006422 ORTHO05D007992 2.6e-43 179.1 129 65.1
BolC9t58478H Brassica oleracea HOM05D006422 ORTHO05D007992 2.6e-43 179.1 129 65.1
BraA10t44055Z Brassica rapa HOM05D006422 ORTHO05D007992 2.6e-43 179.1 129 65.1
Thhalv10014537m.g Eutrema salsugineum HOM05D006422 ORTHO05D007992 3.4e-43 178.7 129 65.1
TPR.G11997 Trifolium pratense HOM05D006422 ORTHO05D007992 3.4e-43 178.7 124 66.1
Gohir.D06G108900 Gossypium hirsutum HOM05D006422 ORTHO05D007992 5.8e-43 177.9 118 70.3
A03p09710 Brassica napus HOM05D006422 ORTHO05D007992 7.6e-43 177.6 129 64.3
BraA03t10287Z Brassica rapa HOM05D006422 ORTHO05D007992 7.6e-43 177.6 129 64.3
Sp6g24440 Schrenkiella parvula HOM05D006422 ORTHO05D007992 7.6e-43 177.6 129 64.3
CDE04G2326 Ceratophyllum demersum HOM05D006422 ORTHO05D007992 9.9e-43 177.2 122 68.9
Gorai.010G123700 Gossypium raimondii HOM05D006422 ORTHO05D007992 9.9e-43 177.2 118 70.3
MD15G1109900 Malus domestica HOM05D006422 ORTHO05D007992 9.9e-43 177.2 123 69.1
VMungo0647G2190 Vigna mungo HOM05D006422 ORTHO05D007992 1.3e-42 176.8 123 69.9
CARHR192910 Cardamine hirsuta HOM05D006422 ORTHO05D007992 1.7e-42 176.4 129 63.6
Hma1.2p1_0534F.1_g173730 Hydrangea macrophylla HOM05D006422 ORTHO05D007992 1.7e-42 176.4 127 68.5
FAN27G3442 Fragaria x ananassa HOM05D006422 ORTHO05D007992 2.2e-42 176.0 125 68.8
Gohir.A06G106700 Gossypium hirsutum HOM05D006422 ORTHO05D007992 2.2e-42 176.0 122 69.7
HPP92_004705 Vanilla planifolia HOM05D006422 ORTHO05D007992 2.2e-42 176.0 130 65.4
BolC3t13599H Brassica oleracea HOM05D006422 ORTHO05D007992 2.9e-42 175.6 129 63.6
FAN15G3645 Fragaria x ananassa HOM05D006422 ORTHO05D007992 2.9e-42 175.6 124 67.7
HanXRQChr13g0412481 Helianthus annuus HOM05D006422 ORTHO05D007992 2.9e-42 175.6 132 64.4
AUR62038756 Chenopodium quinoa HOM05D006422 ORTHO05D007992 3.8e-42 175.3 111 73.0
Eucgr.C02103 Eucalyptus grandis HOM05D006422 ORTHO05D007992 3.8e-42 175.3 129 67.4
PGR042G1463 Punica granatum HOM05D006422 ORTHO05D007992 3.8e-42 175.3 129 66.7
ATR0626G032 Amborella trichopoda HOM05D006422 ORTHO05D007992 4.9e-42 174.9 122 68.9
BcaB01g04822 Brassica carinata HOM05D006422 ORTHO05D007992 6.4e-42 174.5 129 62.8
BcaB01g04848 Brassica carinata HOM05D006422 ORTHO05D007992 6.4e-42 174.5 129 62.8
C03p11290 Brassica napus HOM05D006422 ORTHO05D007992 6.4e-42 174.5 129 62.8
Glyma.17G201600 Glycine max HOM05D006422 ORTHO05D007992 6.4e-42 174.5 124 67.7
arahy.Tifrunner.gnm1.ann1.43EIBT Arachis hypogaea HOM05D006422 ORTHO05D007992 1.1e-41 173.7 124 66.1
unitig_748.g7381 Utricularia gibba HOM05D006422 ORTHO05D007992 1.1e-41 173.7 122 67.2
ECA240G0283 Erigeron canadensis HOM05D000069 ORTHO05D000060 1.4e-41 173.3 127 63.8
arahy.Tifrunner.gnm1.ann1.D9GJPD Arachis hypogaea HOM05D006422 ORTHO05D007992 1.9e-41 172.9 124 66.1
Lsat_1_v5_gn_5_61061 Lactuca sativa HOM05D006422 ORTHO05D007992 1.9e-41 172.9 120 69.2
Haze_21696 Corylus avellana HOM05D006422 ORTHO05D007992 4.2e-41 171.8 104 76.0
DCAR_003025 Daucus carota HOM05D006422 ORTHO05D007992 4.2e-41 171.8 116 73.3
Aa31LG9G9500 Aethionema arabicum HOM05D006422 ORTHO05D007992 5.4e-41 171.4 129 62.8
SGA_v2.0_scaffold27G11666 Striga asiatica HOM05D006422 ORTHO05D007992 7.1e-41 171.0 111 73.0
AT5G19940 Arabidopsis thaliana HOM05D006422 ORTHO05D007992 1.2e-40 170.2 129 62.8
AL6G31470 Arabidopsis lyrata HOM05D006422 ORTHO05D007992 1.6e-40 169.9 129 62.0
Carub.0006s1831 Capsella rubella HOM05D006422 ORTHO05D007992 2.7e-40 169.1 129 62.0
Nitab4.5_0003259g0070 Nicotiana tabacum HOM05D006422 ORTHO05D007992 4.6e-40 168.3 134 64.9
Zm00001eb071430 Zea mays HOM05D006422 ORTHO05D007992 1.1e-38 163.7 117 68.4
Oeu018400.2 Olea europaea HOM05D006422 ORTHO05D007992 3.3e-38 162.2 106 72.6
Os04g0607000 Oryza sativa ssp. japonica HOM05D006422 ORTHO05D007992 2.8e-37 159.1 118 63.6
SEGI_33970 Sequoiadendron giganteum HOM05D006422 ORTHO05D007992 2.1e-32 142.9 130 53.1
CiPaw.08G017800 Carya illinoinensis HOM05D006422 ORTHO05D007992 5.1e-31 138.3 140 55.7
Ah.11g043920 Amaranthus hybridus HOM05D006422 ORTHO05D007992 7.6e-27 124.4 126 55.6
Mapoly0021s0119 Marchantia polymorpha HOM05D006422 ORTHO05D007992 1.7e-26 123.2 117 48.7
Lj7A749G60 Lonicera japonica HOM05D006422 ORTHO05D007992 4.2e-25 118.6 66 80.3
Pp3c13_4790 Physcomitrium patens HOM05D006422 ORTHO05D007992 6.0e-24 114.8 116 44.0
AagrBONN_evm.TU.Sc2ySwM_228.4709 Anthoceros agrestis HOM05D006422 ORTHO05D007992 1.8e-23 113.2 125 42.4
SMO364G0843 Selaginella moellendorffii HOM05D006422 ORTHO05D007992 8.7e-23 110.9 109 52.3
Gorai.002G101300 Gossypium raimondii HOM05D006422 ORTHO05D007992 4.3e-14 82.0 56 69.6
CBR_g3792 Chara braunii HOM05D006422 ORTHO05D007992 2.2e-13 79.7 120 33.3
Cre07.g325736 Chlamydomonas reinhardtii HOM05D006422 ORTHO05D007992 1.4e-12 77.0 128 29.7
Hund19396 Selenicereus undatus HOM05D006422 ORTHO05D007992 1.8e-12 76.6 63 58.7
Cre12.g502250 Chlamydomonas reinhardtii HOM05D006422 ORTHO05D007992 1.6e-08 63.5 127 31.5
MCO15G093 Micromonas commoda HOM05D006422 ORTHO05D007992 1.8e-07 60.1 125 29.6


User provided reference genes

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