Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0017457 Camellia sinensis var. sinensis HOM05D007753 ORTHO05D009385 8.2e-204 713.4 330 100.0
vmacro18967 Vaccinium macrocarpon HOM05D007753 ORTHO05D009385 1.1e-123 447.2 368 61.4
Rhsim08G0215900 Rhododendron simsii HOM05D007753 ORTHO05D009385 1.0e-121 440.7 369 60.7
Hma1.2p1_0515F.1_g170220 Hydrangea macrophylla HOM05D007753 ORTHO05D009385 1.5e-117 426.8 372 60.5
Lj5C69T4 Lonicera japonica HOM05D007753 ORTHO05D009385 4.6e-114 415.2 368 59.2
Cc04_g04070 Coffea canephora HOM05D007753 ORTHO05D009385 2.5e-112 409.5 375 58.1
Nitab4.5_0002257g0030 Nicotiana tabacum HOM05D007753 ORTHO05D009385 7.6e-109 397.9 371 56.6
QL05p027928 Quercus lobata HOM05D007753 ORTHO05D009385 4.9e-108 395.2 369 57.5
COL.COLO4_12908 Corchorus olitorius HOM05D007753 ORTHO05D009385 1.1e-107 394.0 373 57.1
Nitab4.5_0006574g0050 Nicotiana tabacum HOM05D007753 ORTHO05D009385 1.1e-107 394.0 373 56.0
Peaxi162Scf00274g00826 Petunia axillaris HOM05D007753 ORTHO05D009385 5.4e-107 391.7 371 54.7
Dinv30574 Davidia involucrata HOM05D007753 ORTHO05D009385 9.3e-107 391.0 367 58.0
Thecc.06G071000 Theobroma cacao HOM05D007753 ORTHO05D009385 4.6e-106 388.7 356 58.1
Manes.11G053400 Manihot esculenta HOM05D007753 ORTHO05D009385 7.9e-106 387.9 373 52.8
CiPaw.01G244900 Carya illinoinensis HOM05D007753 ORTHO05D009385 1.8e-105 386.7 372 54.6
TAR626G0406 Trochodendron aralioides HOM05D007753 ORTHO05D009385 8.7e-105 384.4 373 53.1
Gohir.A05G125300 Gossypium hirsutum HOM05D007753 ORTHO05D009385 1.5e-104 383.6 370 55.1
PGSC0003DMG400000606 Solanum tuberosum HOM05D007753 ORTHO05D009385 1.6e-103 380.2 378 53.4
TAR626G0264 Trochodendron aralioides HOM05D007753 ORTHO05D009385 1.1e-102 377.5 373 52.3
Gohir.D05G126300 Gossypium hirsutum HOM05D007753 ORTHO05D009385 2.4e-102 376.3 370 54.6
Haze_16518 Corylus avellana HOM05D007753 ORTHO05D009385 2.0e-101 373.2 373 52.3
Solyc03g116480.1 Solanum lycopersicum HOM05D007753 ORTHO05D009385 3.4e-101 372.5 370 54.1
Sabra03G0036100 Salix brachista HOM05D007753 ORTHO05D009385 4.5e-101 372.1 372 53.5
CAN.G407.105 Capsicum annuum HOM05D007753 ORTHO05D009385 7.6e-101 371.3 366 54.9
Sopen03g035370 Solanum pennellii HOM05D007753 ORTHO05D009385 7.6e-101 371.3 370 53.8
Gorai.009G130300 Gossypium raimondii HOM05D007753 ORTHO05D009385 1.3e-100 370.5 370 53.8
PGR102G0169 Punica granatum HOM05D007753 ORTHO05D009385 1.7e-100 370.2 369 52.6
Nn8g39391 Nelumbo nucifera HOM05D007753 ORTHO05D009385 2.9e-100 369.4 374 52.9
Nn2g11967 Nelumbo nucifera HOM05D007753 ORTHO05D009385 1.4e-99 367.1 377 51.2
Cfa002006 Carpinus fangiana HOM05D007753 ORTHO05D009385 4.2e-99 365.5 376 52.1
FAN02G0819 Fragaria x ananassa HOM05D007753 ORTHO05D009385 7.1e-99 364.8 373 52.8
Cpa.g.sc10.226 Carica papaya HOM05D007753 ORTHO05D009385 2.7e-98 362.8 375 51.5
Prupe.3G081200 Prunus persica HOM05D007753 ORTHO05D009385 3.5e-98 362.5 382 50.3
FAN14G1500 Fragaria x ananassa HOM05D007753 ORTHO05D009385 7.9e-98 361.3 373 52.5
Atru.chr1.3069 Acer truncatum HOM05D007753 ORTHO05D009385 2.3e-97 359.8 387 51.9
FAN05G5641 Fragaria x ananassa HOM05D007753 ORTHO05D009385 2.3e-97 359.8 373 52.3
Glyma.07G032000 Glycine max HOM05D007753 ORTHO05D009385 3.0e-97 359.4 377 49.6
FvH4_6g30250 Fragaria vesca HOM05D007753 ORTHO05D009385 3.3e-96 355.9 373 52.0
SGA_v2.0_scaffold5G02663 Striga asiatica HOM05D007753 ORTHO05D009385 3.3e-96 355.9 364 50.3
CsaV3_4G001420 Cucumis sativus L. HOM05D007753 ORTHO05D009385 2.1e-95 353.2 370 50.8
Glyma.08G210700 Glycine max HOM05D007753 ORTHO05D009385 1.4e-94 350.5 371 49.9
RcHm_v2.0_Chr2g0136491 Rosa chinensis HOM05D007753 ORTHO05D009385 1.4e-94 350.5 382 50.3
MELO3C017898.2 Cucumis melo HOM05D007753 ORTHO05D009385 4.0e-94 349.0 370 50.8
Lj3g0017927 Lotus japonicus HOM05D007753 ORTHO05D009385 1.2e-93 347.4 370 50.0
DCAR_025487 Daucus carota HOM05D007753 ORTHO05D009385 3.4e-93 345.9 364 50.0
arahy.Tifrunner.gnm1.ann1.PVCU19 Arachis hypogaea HOM05D007753 ORTHO05D009385 3.8e-92 342.4 381 48.8
TWI75G0540 Tripterygium wilfordii HOM05D007753 ORTHO05D009385 6.5e-92 341.7 366 49.5
MD17G1206200 Malus domestica HOM05D007753 ORTHO05D009385 1.1e-91 340.9 389 49.1
MSTRG.11118 Avicennia marina HOM05D007753 ORTHO05D009385 1.4e-91 340.5 372 50.0
arahy.Tifrunner.gnm1.ann1.M43JJC Arachis hypogaea HOM05D007753 ORTHO05D009385 1.9e-91 340.1 381 48.8
Potri.003G062000 Populus trichocarpa HOM05D007753 ORTHO05D009385 3.2e-91 339.3 317 57.1
Ciclev10027449m.g Citrus clementina HOM05D007753 ORTHO05D009385 5.5e-91 338.6 299 56.9
HanXRQChr09g0274921 Helianthus annuus HOM05D007753 ORTHO05D009385 1.2e-90 337.4 362 50.3
Oeu015237.1 Olea europaea HOM05D007753 ORTHO05D009385 1.2e-90 337.4 337 52.5
CANSAT56G2472 Cannabis sativa HOM05D007753 ORTHO05D009385 1.6e-90 337.0 381 47.8
Sed0004194 Sechium edule HOM05D007753 ORTHO05D009385 4.6e-90 335.5 366 50.3
ClCG00G004440 Citrullus lanatus HOM05D007753 ORTHO05D009385 2.3e-89 333.2 370 49.7
ClCG07G012780 Citrullus lanatus HOM05D007753 ORTHO05D009385 2.3e-89 333.2 370 49.7
Migut.I00798 Erythranthe guttata HOM05D007753 ORTHO05D009385 1.5e-88 330.5 369 49.3
Medtr4g011090 Medicago truncatula HOM05D007753 ORTHO05D009385 6.3e-87 325.1 373 47.5
Sed0009628 Sechium edule HOM05D007753 ORTHO05D009385 1.4e-86 323.9 370 48.1
Aqoxy7G02101 Aquilegia oxysepala HOM05D007753 ORTHO05D009385 4.1e-86 322.4 383 48.0
TPR.G38673 Trifolium pratense HOM05D007753 ORTHO05D009385 2.2e-84 316.6 373 46.1
HanXRQChr16g0500541 Helianthus annuus HOM05D007753 ORTHO05D009385 2.5e-83 313.2 364 49.2
Ca_20429_v3 Cicer arietinum L. HOM05D007753 ORTHO05D009385 4.2e-83 312.4 376 46.5
ECA232G3915 Erigeron canadensis HOM05D007753 ORTHO05D009385 9.4e-83 311.2 378 45.5
Eucgr.F02545 Eucalyptus grandis HOM05D007753 ORTHO05D009385 9.4e-83 311.2 281 57.7
Psat7g000960 Pisum sativum HOM05D007753 ORTHO05D009385 9.4e-83 311.2 377 45.4
Lalb_Chr04g0262461 Lupinus albus HOM05D007753 ORTHO05D009385 1.4e-81 307.4 367 46.0
Phvul.010G154000 Phaseolus vulgaris HOM05D007753 ORTHO05D009385 9.7e-80 301.2 368 46.5
Rhsim03G0103900 Rhododendron simsii HOM05D007753 ORTHO05D009385 3.7e-79 299.3 333 48.9
VMungo0331G0527 Vigna mungo HOM05D007753 ORTHO05D009385 1.1e-78 297.7 368 46.7
QL05p063911 Quercus lobata HOM05D007753 ORTHO05D009385 3.1e-62 243.0 246 54.5
Lsat_1_v5_gn_4_105861 Lactuca sativa HOM05D007753 ORTHO05D009385 1.2e-58 231.1 249 51.0
SEGI_20973 Sequoiadendron giganteum HOM05D007753 ORTHO05D009385 3.2e-51 206.5 373 35.4
SEGI_19660 Sequoiadendron giganteum HOM05D007753 ORTHO05D009385 1.0e-49 201.4 366 35.5
Nn1g04494 Nelumbo nucifera HOM05D007753 ORTHO05D009385 1.4e-38 164.5 204 44.6
Actinidia01765 Actinidia chinensis HOM05D007753 ORTHO05D009385 2.0e-32 144.1 101 74.3
Pp3c22_13680 Physcomitrium patens HOM05D007753 ORTHO05D009385 4.4e-32 142.9 360 31.1
Pp3c19_15800 Physcomitrium patens HOM05D007753 ORTHO05D009385 1.3e-31 141.4 343 31.2
SMO276G0031 Selaginella moellendorffii HOM05D007753 ORTHO05D009385 1.7e-31 141.0 372 28.8
Rhsim03G0101500 Rhododendron simsii HOM05D007753 ORTHO05D009385 1.9e-30 137.5 152 50.7
TPR.G7327 Trifolium pratense HOM05D007753 ORTHO05D009385 6.6e-28 129.0 190 38.9
ATR0561G071 Amborella trichopoda HOM05D005977 ORTHO05D004563 8.6e-20 102.1 286 27.6
Mapoly0125s0029 Marchantia polymorpha HOM05D002809 ORTHO05D009091 2.1e-18 97.4 302 26.5
SEGI_08151 Sequoiadendron giganteum HOM05D002809 ORTHO05D009091 6.2e-18 95.9 306 26.5
ATR1156G045 Amborella trichopoda HOM05D007753 ORTHO05D009385 1.4e-17 94.7 220 33.2
ATR1156G059 Amborella trichopoda HOM05D007753 ORTHO05D009385 9.9e-16 88.6 140 37.9
SEGI_07480 Sequoiadendron giganteum HOM05D005977 ORTHO05D004563 9.9e-16 88.6 285 28.4
Cfa015409 Carpinus fangiana HOM05D007753 ORTHO05D009385 3.7e-15 86.7 97 47.4
Pp3c14_23730 Physcomitrium patens HOM05D002809 ORTHO05D004563 2.4e-14 84.0 300 25.7
Mapoly0063s0081 Marchantia polymorpha HOM05D002809 ORTHO05D004563 2.1e-13 80.9 215 30.2
AagrBONN_evm.TU.Sc2ySwM_362.2328 Anthoceros agrestis HOM05D004302 ORTHO05D009385 2.7e-13 80.5 351 22.2
Mapoly0045s0085 Marchantia polymorpha HOM05D002809 ORTHO05D004939 3.0e-12 77.0 296 25.3
Mapoly0063s0077 Marchantia polymorpha HOM05D002809 ORTHO05D004939 3.9e-12 76.6 223 28.7
MapolyY_A0023 Marchantia polymorpha HOM05D002809 ORTHO05D004563 6.6e-12 75.9 220 25.5
Pp3c7_9930 Physcomitrium patens HOM05D002809 ORTHO05D004939 1.5e-11 74.7 304 24.3
Nn1g04493 Nelumbo nucifera HOM05D007753 ORTHO05D009385 3.3e-11 73.6 63 50.8
DCAR_026456 Daucus carota HOM05D002809 ORTHO05D004563 2.1e-10 70.9 224 25.9
SEGI_01072 Sequoiadendron giganteum HOM05D012660 ORTHO05D012113 6.2e-10 69.3 309 23.9
Mapoly0014s0188 Marchantia polymorpha HOM05D002809 ORTHO05D004563 1.1e-09 68.6 227 26.9
Pp3c22_15730 Physcomitrium patens HOM05D003005 ORTHO05D009385 1.1e-09 68.6 220 26.4
AagrBONN_evm.TU.Sc2ySwM_228.846 Anthoceros agrestis HOM05D002809 ORTHO05D004939 1.4e-09 68.2 222 23.9
Pp3c14_15770 Physcomitrium patens HOM05D003005 ORTHO05D004939 1.4e-09 68.2 222 25.2
Mapoly0101s0058 Marchantia polymorpha HOM05D002809 ORTHO05D004939 1.8e-09 67.8 236 25.4
SMO364G0869 Selaginella moellendorffii HOM05D003005 ORTHO05D004563 1.8e-09 67.8 321 23.7
Nn4g24931 Nelumbo nucifera HOM05D007753 ORTHO05D009385 2.4e-09 67.4 115 43.5
SMO239G0172 Selaginella moellendorffii HOM05D003005 ORTHO05D004563 2.4e-09 67.4 235 27.2
Migut.B01816 Erythranthe guttata HOM05D003005 ORTHO05D004170 6.8e-09 65.9 216 27.3
HanXRQChr12g0361241 Helianthus annuus HOM05D002809 ORTHO05D004563 8.9e-09 65.5 224 25.4
Pp3c14_9030 Physcomitrium patens HOM05D002809 ORTHO05D009385 1.2e-08 65.1 208 21.6
SMO116G0047 Selaginella moellendorffii HOM05D002809 ORTHO05D004563 1.5e-08 64.7 230 26.1
Mapoly0033s0124 Marchantia polymorpha HOM05D004302 ORTHO05D004939 2.6e-08 63.9 220 24.5
Solyc05g015520.3 Solanum lycopersicum HOM05D002809 ORTHO05D004563 3.4e-08 63.5 375 22.7
CSS0001428 Camellia sinensis var. sinensis HOM05D002809 ORTHO05D004563 5.8e-08 62.8 372 23.1
Sopen12g034970 Solanum pennellii HOM05D002809 ORTHO05D004563 5.8e-08 62.8 375 22.1
Lsat_1_v5_gn_3_30801 Lactuca sativa HOM05D002809 ORTHO05D004563 1.7e-07 61.2 369 23.3
Duzib211G0565 Durio zibethinus HOM05D000007 ORTHO05D000521 2.2e-07 60.8 241 27.0
CANSAT01G2827 Cannabis sativa HOM05D002809 ORTHO05D004563 2.9e-07 60.5 374 22.5
ECA246G0607 Erigeron canadensis HOM05D002809 ORTHO05D004563 2.9e-07 60.5 224 24.1
Psat4g213360 Pisum sativum HOM05D003005 ORTHO05D004170 3.8e-07 60.1 304 23.4
AagrBONN_evm.TU.Sc2ySwM_362.1622 Anthoceros agrestis HOM05D002809 ORTHO05D004563 4.9e-07 59.7 230 24.8
Mapoly0045s0086 Marchantia polymorpha HOM05D005977 ORTHO05D009385 4.9e-07 59.7 270 21.9
TWI14G0349 Tripterygium wilfordii HOM05D003005 ORTHO05D004170 4.9e-07 59.7 235 25.1
MD01G1073800 Malus domestica HOM05D003005 ORTHO05D004170 6.4e-07 59.3 216 25.9
Nn5g28167 Nelumbo nucifera HOM05D002809 ORTHO05D004939 8.4e-07 58.9 224 25.0
Pp3c22_14550 Physcomitrium patens HOM05D002809 ORTHO05D009385 8.4e-07 58.9 198 23.2
Cc10_g14550 Coffea canephora HOM05D006114 ORTHO05D007609 3.2e-06 57.0 163 30.1
Aqoxy5G03341 Aquilegia oxysepala HOM05D002809 ORTHO05D004563 4.2e-06 56.6 367 21.3
CiPaw.04G106700 Carya illinoinensis HOM05D007853 ORTHO05D009873 4.2e-06 56.6 202 26.2
ClCG09G009130 Citrullus lanatus HOM05D007853 ORTHO05D009873 5.4e-06 56.2 196 26.0
Migut.C01010 Erythranthe guttata HOM05D006114 ORTHO05D007609 5.4e-06 56.2 141 31.9
Pp3c3_5460 Physcomitrium patens HOM05D002809 ORTHO05D004563 7.1e-06 55.8 196 24.0
Cfa018335 Carpinus fangiana HOM05D006114 ORTHO05D007609 9.3e-06 55.5 137 30.7
Haze_17740 Corylus avellana HOM05D006114 ORTHO05D007609 9.3e-06 55.5 138 30.4
TAR381G1603 Trochodendron aralioides HOM05D006114 ORTHO05D007609 9.3e-06 55.5 127 33.9


User provided reference genes

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