Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0017432 Camellia sinensis var. sinensis HOM05D028273 ORTHO05D005886 1.3e-96 356.7 218 100.0
CSS0044296 Camellia sinensis var. sinensis HOM05D028273 ORTHO05D014695 7.4e-60 234.6 241 70.1
CSS0009862 Camellia sinensis var. sinensis HOM05D028273 ORTHO05D005886 3.5e-54 215.7 242 66.9
CSS0042319 Camellia sinensis var. sinensis HOM05D028273 ORTHO05D005886 3.2e-47 192.6 218 65.1
FAN08G1587 Fragaria x ananassa HOM05D005012 ORTHO05D005886 1.6e-09 67.4 106 35.8
RcHm_v2.0_Chr1g0341871 Rosa chinensis HOM05D005012 ORTHO05D005886 1.3e-08 64.3 42 66.7
RcHm_v2.0_Chr7g0230481 Rosa chinensis HOM05D005012 ORTHO05D005886 1.3e-08 64.3 42 66.7
CSS0038015 Camellia sinensis var. sinensis HOM05D005012 ORTHO05D005886 1.7e-08 63.9 55 52.7
RcHm_v2.0_Chr6g0273901 Rosa chinensis HOM05D005012 ORTHO05D005886 3.8e-08 62.8 42 64.3
TWI79G1319 Tripterygium wilfordii HOM05D000107 ORTHO05D000062 2.5e-07 60.1 49 59.2
CSS0016088 Camellia sinensis var. sinensis HOM05D005012 ORTHO05D005886 4.2e-07 59.3 55 50.9
CSS0019574 Camellia sinensis var. sinensis HOM05D005012 ORTHO05D005886 1.2e-06 57.8 55 49.1
CSS0022677 Camellia sinensis var. sinensis HOM05D005012 ORTHO05D005886 2.1e-06 57.0 55 49.1
CSS0045334 Camellia sinensis var. sinensis HOM05D005012 ORTHO05D005886 2.1e-06 57.0 55 49.1
CSS0044969 Camellia sinensis var. sinensis HOM05D005012 ORTHO05D005886 2.7e-06 56.6 55 49.1
FvH4_4g09791 Fragaria vesca HOM05D000107 ORTHO05D000062 2.7e-06 56.6 47 53.2
FAN04G2098 Fragaria x ananassa HOM05D005012 ORTHO05D005886 3.6e-06 56.2 50 46.0
FAN10G0147 Fragaria x ananassa HOM05D000539 ORTHO05D000592 3.6e-06 56.2 42 57.1
FAN16G2537 Fragaria x ananassa HOM05D005012 ORTHO05D005886 3.6e-06 56.2 42 57.1
FAN26G2139 Fragaria x ananassa HOM05D005012 ORTHO05D005886 3.6e-06 56.2 42 57.1
FvH4_3g22860 Fragaria vesca HOM05D005012 ORTHO05D005886 4.7e-06 55.8 41 56.1
FAN04G2636 Fragaria x ananassa HOM05D005012 ORTHO05D005886 4.7e-06 55.8 49 46.9
FAN12G0378 Fragaria x ananassa HOM05D005012 ORTHO05D005886 4.7e-06 55.8 47 53.2
FAN25G0106 Fragaria x ananassa HOM05D005012 ORTHO05D005886 4.7e-06 55.8 49 46.9
FAN28G1702 Fragaria x ananassa HOM05D005012 ORTHO05D005886 4.7e-06 55.8 41 58.5
CSS0001231 Camellia sinensis var. sinensis HOM05D005012 ORTHO05D005886 6.1e-06 55.5 54 48.1
CSS0012868 Camellia sinensis var. sinensis HOM05D005012 ORTHO05D005886 6.1e-06 55.5 55 47.3
FAN15G1928 Fragaria x ananassa HOM05D005012 ORTHO05D005886 8.0e-06 55.1 49 53.1
Rhsim05G0024300 Rhododendron simsii HOM05D005012 ORTHO05D005886 8.0e-06 55.1 46 41.3
Rhsim05G0034600 Rhododendron simsii HOM05D005012 ORTHO05D005886 8.0e-06 55.1 46 41.3


User provided reference genes

Program Settings