Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0017427 Camellia sinensis var. sinensis HOM05D006027 ORTHO05D007604 1.0e-78 296.6 145 100.0
CSS0010160 Camellia sinensis var. sinensis HOM05D006027 ORTHO05D007604 1.2e-37 160.2 165 52.7
CSS0012566 Camellia sinensis var. sinensis HOM05D006027 ORTHO05D007604 1.2e-37 160.2 165 52.7
Actinidia09513 Actinidia chinensis HOM05D006027 ORTHO05D007604 3.2e-35 152.1 171 50.3
Actinidia23700 Actinidia chinensis HOM05D006027 ORTHO05D007604 2.1e-34 149.4 171 50.9
Dinv43066 Davidia involucrata HOM05D006027 ORTHO05D007604 3.0e-33 145.6 171 49.1
Rhsim01G0260300 Rhododendron simsii HOM05D006027 ORTHO05D007604 1.1e-32 143.7 147 55.1
vmacro14793 Vaccinium macrocarpon HOM05D006027 ORTHO05D007604 1.9e-32 142.9 172 48.3
Lj1C74G4 Lonicera japonica HOM05D006027 ORTHO05D007604 4.0e-30 135.2 143 54.5
CANSAT01G0515 Cannabis sativa HOM05D006027 ORTHO05D007604 1.2e-29 133.7 173 45.7
Oeu015437.1 Olea europaea HOM05D006027 ORTHO05D007604 2.0e-29 132.9 149 52.3
Glyma.13G127200 Glycine max HOM05D006027 ORTHO05D007604 4.5e-29 131.7 171 48.5
Nitab4.5_0002435g0010 Nicotiana tabacum HOM05D006027 ORTHO05D007604 4.5e-29 131.7 171 47.4
GSVIVG01028434001 Vitis vinifera HOM05D006027 ORTHO05D007604 4.5e-29 131.7 142 52.1
Manes.13G039500 Manihot esculenta HOM05D006027 ORTHO05D007604 9.9e-29 130.6 172 47.1
Potri.002G256400 Populus trichocarpa HOM05D006027 ORTHO05D007604 9.9e-29 130.6 172 45.9
CANSAT01G2333 Cannabis sativa HOM05D006027 ORTHO05D007604 1.3e-28 130.2 173 45.7
Manes.12G038000 Manihot esculenta HOM05D006027 ORTHO05D007604 1.3e-28 130.2 171 47.4
MD05G1188500 Malus domestica HOM05D006027 ORTHO05D007604 1.7e-28 129.8 171 45.0
Nitab4.5_0000845g0140 Nicotiana tabacum HOM05D006027 ORTHO05D007604 1.7e-28 129.8 171 46.8
Eucgr.K01424 Eucalyptus grandis HOM05D006027 ORTHO05D007604 2.2e-28 129.4 141 54.6
FAN27G2528 Fragaria x ananassa HOM05D006027 ORTHO05D007604 2.2e-28 129.4 170 45.9
PGR044G2038 Punica granatum HOM05D006027 ORTHO05D007604 2.2e-28 129.4 141 54.6
Thecc.01G249800 Theobroma cacao HOM05D006027 ORTHO05D007604 2.9e-28 129.0 172 47.7
FAN15G2830 Fragaria x ananassa HOM05D006027 ORTHO05D007604 4.9e-28 128.3 170 45.9
CAN.G536.12 Capsicum annuum HOM05D006027 ORTHO05D007604 6.4e-28 127.9 171 46.8
FvH4_2g20470 Fragaria vesca HOM05D006027 ORTHO05D007604 8.4e-28 127.5 170 45.3
FAN24G3422 Fragaria x ananassa HOM05D006027 ORTHO05D007604 8.4e-28 127.5 170 45.3
Nn3g19801 Nelumbo nucifera HOM05D006027 ORTHO05D007604 8.4e-28 127.5 144 51.4
Prupe.8G215000 Prunus persica HOM05D006027 ORTHO05D007604 8.4e-28 127.5 172 47.1
Glyma.10G040600 Glycine max HOM05D006027 ORTHO05D007604 1.1e-27 127.1 171 46.2
QL09p041558 Quercus lobata HOM05D006027 ORTHO05D007604 1.9e-27 126.3 172 46.5
Sopen09g025650 Solanum pennellii HOM05D006027 ORTHO05D007604 1.9e-27 126.3 171 46.8
Cc01_g17770 Coffea canephora HOM05D006027 ORTHO05D007604 2.4e-27 125.9 152 50.7
PGSC0003DMG400008585 Solanum tuberosum HOM05D006027 ORTHO05D007604 2.4e-27 125.9 171 46.2
Migut.D00479 Erythranthe guttata HOM05D006027 ORTHO05D007604 4.2e-27 125.2 173 46.2
VMungo0720G1620 Vigna mungo HOM05D006027 ORTHO05D007604 4.2e-27 125.2 173 45.7
MD10G1176000 Malus domestica HOM05D006027 ORTHO05D007604 5.5e-27 124.8 171 45.0
Solyc09g064500.3 Solanum lycopersicum HOM05D006027 ORTHO05D007604 5.5e-27 124.8 171 46.2
Haze_24710 Corylus avellana HOM05D006027 ORTHO05D007604 2.1e-26 122.9 176 44.9
DCAR_000568 Daucus carota HOM05D006027 ORTHO05D007604 2.1e-26 122.9 143 49.0
Gohir.A07G152700 Gossypium hirsutum HOM05D006027 ORTHO05D007604 2.1e-26 122.9 172 44.8
Oeu052083.1 Olea europaea HOM05D006027 ORTHO05D007604 2.1e-26 122.9 136 52.2
Sabra02G0194900 Salix brachista HOM05D006027 ORTHO05D007604 2.7e-26 122.5 172 44.2
CDE02G4364 Ceratophyllum demersum HOM05D006027 ORTHO05D007604 3.5e-26 122.1 140 50.7
Phvul.007G153500 Phaseolus vulgaris HOM05D006027 ORTHO05D007604 3.5e-26 122.1 175 45.7
Duzib211G0648 Durio zibethinus HOM05D006027 ORTHO05D007604 6.0e-26 121.3 155 48.4
TAR633G0397 Trochodendron aralioides HOM05D006027 ORTHO05D007604 6.0e-26 121.3 142 49.3
Gohir.D07G158900 Gossypium hirsutum HOM05D006027 ORTHO05D007604 1.0e-25 120.6 172 44.8
Lalb_Chr06g0170731 Lupinus albus HOM05D006027 ORTHO05D007604 1.0e-25 120.6 167 47.3
SGA_v2.0_scaffold1G00660 Striga asiatica HOM05D006027 ORTHO05D007604 1.0e-25 120.6 176 44.9
Gorai.001G182100 Gossypium raimondii HOM05D006027 ORTHO05D007604 1.3e-25 120.2 172 44.2
Lj5g0017558 Lotus japonicus HOM05D006027 ORTHO05D007604 1.8e-25 119.8 171 43.9
Cfa002488 Carpinus fangiana HOM05D006027 ORTHO05D007604 2.3e-25 119.4 147 50.3
Duzib138G0534 Durio zibethinus HOM05D006027 ORTHO05D007604 2.3e-25 119.4 173 45.7
TAR362G0914 Trochodendron aralioides HOM05D006027 ORTHO05D007604 3.0e-25 119.0 175 44.6
Atru.chr5.1865 Acer truncatum HOM05D006027 ORTHO05D007604 3.9e-25 118.6 171 43.9
PSO764G0320 Papaver somniferum HOM05D006027 ORTHO05D007604 5.1e-25 118.2 175 41.1
Lalb_Chr02g0152741 Lupinus albus HOM05D006027 ORTHO05D007604 6.7e-25 117.9 173 46.8
MELO3C022393.2 Cucumis melo HOM05D006027 ORTHO05D007604 3.3e-24 115.5 164 43.3
ECA248G3782 Erigeron canadensis HOM05D006027 ORTHO05D007604 4.3e-24 115.2 143 47.6
HanXRQChr01g0014971 Helianthus annuus HOM05D006027 ORTHO05D007604 5.6e-24 114.8 143 49.0
Lsat_1_v5_gn_5_181161 Lactuca sativa HOM05D006027 ORTHO05D007604 7.4e-24 114.4 172 43.0
Os01g0938100 Oryza sativa ssp. japonica HOM05D006027 ORTHO05D007604 9.6e-24 114.0 164 42.7
ClCG06G001400 Citrullus lanatus HOM05D006027 ORTHO05D007604 1.6e-23 113.2 176 42.0
TWI18G0031 Tripterygium wilfordii HOM05D006027 ORTHO05D007604 1.6e-23 113.2 173 42.8
PSO832G0858 Papaver somniferum HOM05D006027 ORTHO05D007604 3.7e-23 112.1 175 40.0
Aqoxy5G00130 Aquilegia oxysepala HOM05D006027 ORTHO05D007604 4.8e-23 111.7 174 40.2
Ciclev10022322m.g Citrus clementina HOM05D006027 ORTHO05D007604 6.2e-23 111.3 139 48.2
arahy.Tifrunner.gnm1.ann1.72UZ71 Arachis hypogaea HOM05D006027 ORTHO05D007604 8.2e-23 110.9 173 43.4
arahy.Tifrunner.gnm1.ann1.FRV526 Arachis hypogaea HOM05D006027 ORTHO05D007604 8.2e-23 110.9 173 43.4
MBI07_g08912_MAGBIO Magnolia biondii HOM05D006027 ORTHO05D007604 8.2e-23 110.9 139 47.5
VMungo1383G1953 Vigna mungo HOM05D006027 ORTHO05D007604 1.1e-22 110.5 141 46.1
Phvul.001G165200 Phaseolus vulgaris HOM05D006027 ORTHO05D007604 4.0e-22 108.6 140 45.7
AUR62025437 Chenopodium quinoa HOM05D006027 ORTHO05D007604 1.5e-21 106.7 143 46.2
Sed0007731 Sechium edule HOM05D006027 ORTHO05D007604 5.8e-21 104.8 136 45.6
BolC1t01050H Brassica oleracea HOM05D000022 ORTHO05D000744 7.6e-21 104.4 145 42.8
CiPaw.03G271300 Carya illinoinensis HOM05D006027 ORTHO05D007604 7.6e-21 104.4 145 46.9
Peaxi162Scf00043g00255 Petunia axillaris HOM05D006027 ORTHO05D007604 7.6e-21 104.4 106 55.7
SalBow4G0311 Salvia bowleyana HOM05D006027 ORTHO05D007604 1.0e-20 104.0 106 56.6
TPR.G5919 Trifolium pratense HOM05D006027 ORTHO05D007604 1.0e-20 104.0 173 40.5
EL10Ac7g17691 Beta vulgaris HOM05D006027 ORTHO05D007604 1.3e-20 103.6 139 43.9
COL.COLO4_10205 Corchorus olitorius HOM05D006027 ORTHO05D007604 1.3e-20 103.6 106 55.7
BraA01t00872Z Brassica rapa HOM05D006027 ORTHO05D007604 3.8e-20 102.1 146 43.2
Medtr1g069465 Medicago truncatula HOM05D006027 ORTHO05D007604 3.8e-20 102.1 175 41.1
Zm00001eb141830 Zea mays HOM05D006027 ORTHO05D007604 3.8e-20 102.1 143 45.5
Ca_09646_v3 Cicer arietinum L. HOM05D006027 ORTHO05D007604 4.9e-20 101.7 107 54.2
unitig_8.g3074 Utricularia gibba HOM05D006027 ORTHO05D007604 4.9e-20 101.7 148 43.9
Zm00001eb141870 Zea mays HOM05D006027 ORTHO05D007604 8.4e-20 100.9 142 43.7
A01p09280 Brassica napus HOM05D006027 ORTHO05D007604 1.1e-19 100.5 143 42.0
THA.LOC104820068 Tarenaya hassleriana HOM05D006027 ORTHO05D007604 1.4e-19 100.1 142 45.8
HPP92_027289 Vanilla planifolia HOM05D006027 ORTHO05D007604 1.9e-19 99.8 107 50.5
Aa31LG2G21720 Aethionema arabicum HOM05D006027 ORTHO05D007604 2.5e-19 99.4 138 42.8
Cpa.g.sc87.33 Carica papaya HOM05D006027 ORTHO05D007604 2.5e-19 99.4 105 54.3
CARHR236440 Cardamine hirsuta HOM05D006027 ORTHO05D007604 3.2e-19 99.0 138 43.5
C01p10860 Brassica napus HOM05D006027 ORTHO05D007604 4.2e-19 98.6 145 40.7
Hund18287 Selenicereus undatus HOM05D006027 ORTHO05D007604 4.2e-19 98.6 142 41.5
BcaC06g32609 Brassica carinata HOM05D006027 ORTHO05D007604 5.5e-19 98.2 145 40.7
A03p58340 Brassica napus HOM05D006027 ORTHO05D007604 5.5e-19 98.2 145 40.7
Thhalv10026347m.g Eutrema salsugineum HOM05D006027 ORTHO05D007604 5.5e-19 98.2 139 43.9
Sc05g0002880 Simmondsia chinensis HOM05D006027 ORTHO05D007604 5.5e-19 98.2 108 53.7
AL7G23880 Arabidopsis lyrata HOM05D006027 ORTHO05D007604 7.1e-19 97.8 136 44.1
Psat6g062520 Pisum sativum HOM05D006027 ORTHO05D007604 1.2e-18 97.1 107 52.3
AT4G28660 Arabidopsis thaliana HOM05D006027 ORTHO05D007604 1.6e-18 96.7 136 43.4
ATR0787G157 Amborella trichopoda HOM05D006027 ORTHO05D007604 2.1e-18 96.3 105 51.4
Sp7g26630 Schrenkiella parvula HOM05D006027 ORTHO05D007604 2.1e-18 96.3 140 42.9
BcaNung04696 Brassica carinata HOM05D006027 ORTHO05D007604 2.7e-18 95.9 140 41.4
Mapoly0042s0085 Marchantia polymorpha HOM05D006027 ORTHO05D007604 2.7e-18 95.9 151 40.4
BolC7t46115H Brassica oleracea HOM05D006027 ORTHO05D007604 3.5e-18 95.5 145 40.7
C07p56360 Brassica napus HOM05D006027 ORTHO05D007604 4.6e-18 95.1 144 41.0
AUR62008802 Chenopodium quinoa HOM05D006027 ORTHO05D007604 4.6e-18 95.1 122 47.5
Carub.0007s1200 Capsella rubella HOM05D006027 ORTHO05D007604 7.9e-18 94.4 137 42.3
THA.LOC104814531 Tarenaya hassleriana HOM05D006027 ORTHO05D007604 1.8e-17 93.2 106 48.1
HPP92_008468 Vanilla planifolia HOM05D006027 ORTHO05D007604 3.9e-17 92.0 107 49.5
SMO347G0509 Selaginella moellendorffii HOM05D006027 ORTHO05D007604 2.2e-15 86.3 104 47.1
Pp3c7_5450 Physcomitrium patens HOM05D006027 ORTHO05D007604 2.8e-15 85.9 162 35.2
Pp3c11_18280 Physcomitrium patens HOM05D006027 ORTHO05D007604 2.6e-13 79.3 109 37.6
AagrBONN_evm.TU.Sc2ySwM_340.224 Anthoceros agrestis HOM05D006027 ORTHO05D007604 4.5e-13 78.6 101 43.6
Ah.15g092630 Amaranthus hybridus HOM05D006027 ORTHO05D007604 2.1e-10 69.7 112 40.2
Cre10.g440450 Chlamydomonas reinhardtii HOM05D006027 ORTHO05D007604 7.9e-10 67.8 110 34.5
PRCOL_00005949 Prasinoderma coloniale HOM05D006027 ORTHO05D007604 3.9e-09 65.5 57 52.6
Zm00001eb141750 Zea mays HOM05D006027 ORTHO05D007604 8.8e-09 64.3 48 66.7
Zm00001eb141790 Zea mays HOM05D006027 ORTHO05D007604 8.8e-09 64.3 48 66.7
RcHm_v2.0_Chr6g0286561 Rosa chinensis HOM05D006027 ORTHO05D007604 2.5e-08 62.8 86 41.9
CBR_g12742 Chara braunii HOM05D006027 ORTHO05D007604 3.3e-08 62.4 67 47.8
MCO16G336 Micromonas commoda HOM05D006027 ORTHO05D007604 3.3e-08 62.4 100 35.0


User provided reference genes

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