Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0017423 Camellia sinensis var. sinensis HOM05D000732 ORTHO05D001037 4.0e-53 211.1 101 100.0
CSS0002195 Camellia sinensis var. sinensis HOM05D000732 ORTHO05D001037 1.0e-27 126.7 101 70.3
Actinidia21587 Actinidia chinensis HOM05D000732 ORTHO05D001037 6.3e-22 107.5 70 67.1
vmacro22283 Vaccinium macrocarpon HOM05D000732 ORTHO05D001037 1.4e-21 106.3 68 69.1
Dinv43506 Davidia involucrata HOM05D000732 ORTHO05D001037 1.9e-18 95.9 68 72.1
Hma1.2p1_0128F.1_g059870 Hydrangea macrophylla HOM05D000732 ORTHO05D001037 1.0e-16 90.1 68 69.1
Haze_03278 Corylus avellana HOM05D000732 ORTHO05D001037 1.7e-14 82.8 81 56.8
Lj9A619T35 Lonicera japonica HOM05D000732 ORTHO05D001037 1.7e-14 82.8 84 52.4
TAR636G1042 Trochodendron aralioides HOM05D000732 ORTHO05D001037 2.2e-14 82.4 64 57.8
Cpa.g.c29923.4 Carica papaya HOM05D000732 ORTHO05D001037 6.3e-14 80.9 68 55.9
Prupe.2G001500 Prunus persica HOM05D000732 ORTHO05D001037 8.2e-14 80.5 68 54.4
Cfa010698 Carpinus fangiana HOM05D000732 ORTHO05D001037 1.6e-12 76.3 68 58.8
DCAR_029583 Daucus carota HOM05D000732 ORTHO05D001037 1.6e-12 76.3 69 53.6
ECA248G3897 Erigeron canadensis HOM05D000732 ORTHO05D001037 2.0e-12 75.9 69 52.2
TWI09G0078 Tripterygium wilfordii HOM05D000732 ORTHO05D001037 2.2e-11 72.4 66 56.1
CANSAT11G0131 Cannabis sativa HOM05D000732 ORTHO05D001037 1.1e-10 70.1 72 48.6
Nitab4.5_0009826g0010 Nicotiana tabacum HOM05D000732 ORTHO05D001037 1.5e-10 69.7 66 50.0
Cc02_g26770 Coffea canephora HOM05D000732 ORTHO05D001037 1.9e-10 69.3 71 53.5
Aqoxy2G00541 Aquilegia oxysepala HOM05D000732 ORTHO05D001037 2.5e-10 68.9 67 49.3
Lsat_1_v5_gn_1_87481 Lactuca sativa HOM05D000732 ORTHO05D001037 2.5e-10 68.9 69 46.4
Potri.009G024800 Populus trichocarpa HOM05D000732 ORTHO05D001037 2.5e-10 68.9 69 50.7
Atru.chr11.2716 Acer truncatum HOM05D000732 ORTHO05D001037 3.2e-10 68.6 72 45.8
TAR633G0810 Trochodendron aralioides HOM05D000732 ORTHO05D001037 3.2e-10 68.6 68 51.5
Nitab4.5_0000468g0170 Nicotiana tabacum HOM05D000732 ORTHO05D001037 5.5e-10 67.8 66 51.5
Lj3g0014114 Lotus japonicus HOM05D000732 ORTHO05D001037 3.6e-09 65.1 66 48.5
Nn2g15828 Nelumbo nucifera HOM05D000732 ORTHO05D001037 1.4e-08 63.2 68 45.6
HanXRQChr01g0017391 Helianthus annuus HOM05D000732 ORTHO05D001037 1.8e-08 62.8 71 49.3
Psat1g129440 Pisum sativum HOM05D000732 ORTHO05D001037 1.8e-08 62.8 71 43.7
Sabra09G0016400 Salix brachista HOM05D000732 ORTHO05D001037 1.8e-08 62.8 69 47.8
MBI04_g09727_MAGBIO Magnolia biondii HOM05D000732 ORTHO05D001037 2.3e-08 62.4 68 48.5
Manes.10G153200 Manihot esculenta HOM05D000732 ORTHO05D001037 2.3e-08 62.4 67 46.3
Medtr2g062300 Medicago truncatula HOM05D000732 ORTHO05D001037 8.8e-08 60.5 73 42.5
Ca_03225_v3 Cicer arietinum L. HOM05D000732 ORTHO05D001037 1.1e-07 60.1 69 43.5
Lalb_Chr25g0283761 Lupinus albus HOM05D000732 ORTHO05D001037 2.6e-07 58.9 69 47.8
CAN.G1361.8 Capsicum annuum HOM05D000732 ORTHO05D001037 7.5e-07 57.4 99 34.3
Peaxi162Scf00402g00943 Petunia axillaris HOM05D000732 ORTHO05D001037 9.7e-07 57.0 58 48.3
TPR.G16159 Trifolium pratense HOM05D000732 ORTHO05D001037 1.3e-06 56.6 71 42.3
arahy.Tifrunner.gnm1.ann1.ZC37QS Arachis hypogaea HOM05D000732 ORTHO05D001037 2.2e-06 55.8 73 42.5
arahy.Tifrunner.gnm1.ann1.A7IX4D Arachis hypogaea HOM05D000732 ORTHO05D001037 3.7e-06 55.1 72 41.7
PSO339G4027 Papaver somniferum HOM05D000732 ORTHO05D001037 6.3e-06 54.3 69 43.5


User provided reference genes

Program Settings