Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0017407 Camellia sinensis var. sinensis HOM05D001903 ORTHO05D001847 1.4e-91 340.5 323 100.0
Hma1.2p1_0931F.1_g238090 Hydrangea macrophylla HOM05D001903 ORTHO05D001847 3.1e-30 136.7 329 61.1
TAR626G1723 Trochodendron aralioides HOM05D001903 ORTHO05D001847 4.0e-30 136.3 341 54.5
Actinidia26389 Actinidia chinensis HOM05D001903 ORTHO05D001847 5.3e-30 136.0 227 48.5
TAR626G0355 Trochodendron aralioides HOM05D001903 ORTHO05D001847 1.2e-29 134.8 341 54.5
Nn2g12060 Nelumbo nucifera HOM05D001903 ORTHO05D001847 5.8e-29 132.5 230 49.1
Nn8g39477 Nelumbo nucifera HOM05D001903 ORTHO05D001847 2.9e-28 130.2 232 49.1
CSS0008952 Camellia sinensis var. sinensis HOM05D001903 ORTHO05D001847 2.4e-27 127.1 330 53.0
TAR383G0227 Trochodendron aralioides HOM05D001903 ORTHO05D001847 9.3e-27 125.2 236 49.6
vmacro06134 Vaccinium macrocarpon HOM05D001903 ORTHO05D001847 2.7e-26 123.6 330 60.3
Dinv41498 Davidia involucrata HOM05D001903 ORTHO05D001847 1.3e-25 121.3 239 51.9
TAR636G0973 Trochodendron aralioides HOM05D001903 ORTHO05D001847 1.8e-25 120.9 229 48.5
Rhsim03G0248500 Rhododendron simsii HOM05D001903 ORTHO05D001847 2.3e-25 120.6 344 51.7
TAR625G1235 Trochodendron aralioides HOM05D001903 ORTHO05D001847 1.2e-21 108.2 230 49.1
Prupe.7G244700 Prunus persica HOM05D001903 ORTHO05D001847 2.6e-21 107.1 332 57.8
Hma1.2p1_0018F.1_g012310 Hydrangea macrophylla HOM05D001903 ORTHO05D001847 5.8e-21 105.9 125 56.0
Gohir.A13G199800 Gossypium hirsutum HOM05D001903 ORTHO05D001847 1.3e-20 104.8 237 39.7
PGR102G1074 Punica granatum HOM05D001903 ORTHO05D001847 2.9e-20 103.6 339 51.6
Haze_16546 Corylus avellana HOM05D001903 ORTHO05D001847 6.5e-20 102.4 229 43.2
Duzib187G1121 Durio zibethinus HOM05D001903 ORTHO05D001847 6.5e-20 102.4 231 43.3
Gohir.D13G205300 Gossypium hirsutum HOM05D001903 ORTHO05D001847 8.4e-20 102.1 239 38.5
CiPaw.02G156600 Carya illinoinensis HOM05D001903 ORTHO05D001847 1.1e-19 101.7 232 42.2
Ca_21670_v3 Cicer arietinum L. HOM05D001903 ORTHO05D001847 1.9e-19 100.9 224 38.4
GSVIVG01015550001 Vitis vinifera HOM05D001903 ORTHO05D001847 1.9e-19 100.9 224 44.6
Gorai.013G234200 Gossypium raimondii HOM05D001903 ORTHO05D001847 3.2e-19 100.1 237 38.4
MBI01_g36596_MAGBIO Magnolia biondii HOM05D001903 ORTHO05D001847 5.5e-19 99.4 241 51.0
Manes.14G133300 Manihot esculenta HOM05D001903 ORTHO05D001847 5.5e-19 99.4 234 41.0
Atru.chr7.1135 Acer truncatum HOM05D001903 ORTHO05D001847 9.3e-19 98.6 226 50.0
ClCG06G011260 Citrullus lanatus HOM05D001903 ORTHO05D001847 9.3e-19 98.6 224 42.9
QL02p088755 Quercus lobata HOM05D001903 ORTHO05D001847 9.3e-19 98.6 338 47.3
Duzib150G0453 Durio zibethinus HOM05D001903 ORTHO05D001847 1.6e-18 97.8 227 37.0
Cpa.g.sc46.11 Carica papaya HOM05D001903 ORTHO05D001847 2.7e-18 97.1 228 36.8
Duzib168G0350 Durio zibethinus HOM05D001903 ORTHO05D001847 3.5e-18 96.7 336 52.7
Gohir.D06G054100 Gossypium hirsutum HOM05D001903 ORTHO05D001847 6.0e-18 95.9 233 40.8
Manes.06G057500 Manihot esculenta HOM05D001903 ORTHO05D001847 1.3e-17 94.7 231 38.5
QL05p029561 Quercus lobata HOM05D001903 ORTHO05D001847 1.3e-17 94.7 234 41.0
COL.COLO4_35107 Corchorus olitorius HOM05D001903 ORTHO05D001847 1.8e-17 94.4 231 41.6
Gorai.010G063200 Gossypium raimondii HOM05D001903 ORTHO05D001847 1.8e-17 94.4 233 40.3
Gohir.A06G055100 Gossypium hirsutum HOM05D001903 ORTHO05D001847 2.3e-17 94.0 233 39.5
CsaV3_1G030300 Cucumis sativus L. HOM05D001903 ORTHO05D001847 3.9e-17 93.2 329 48.9
Thecc.09G128300 Theobroma cacao HOM05D001903 ORTHO05D001847 6.7e-17 92.4 233 46.4
Sabra06G0050700 Salix brachista HOM05D001903 ORTHO05D001847 8.7e-17 92.0 230 39.6
Sed0022395 Sechium edule HOM05D001903 ORTHO05D001847 2.5e-16 90.5 224 39.7
MELO3C010333.2 Cucumis melo HOM05D001903 ORTHO05D001847 3.3e-16 90.1 224 37.5
Cfa010644 Carpinus fangiana HOM05D001903 ORTHO05D001847 5.7e-16 89.4 221 40.7
MBI04_g29347_MAGBIO Magnolia biondii HOM05D001903 ORTHO05D001847 7.4e-16 89.0 244 43.4
Dinv30598 Davidia involucrata HOM05D001903 ORTHO05D001847 9.7e-16 88.6 224 40.2
Lj4g0003692 Lotus japonicus HOM05D001903 ORTHO05D001847 1.6e-15 87.8 219 41.6
Potri.006G068200 Populus trichocarpa HOM05D001903 ORTHO05D001847 1.6e-15 87.8 337 48.1
Aqoxy7G02202 Aquilegia oxysepala HOM05D001903 ORTHO05D001847 2.2e-15 87.4 233 34.3
Medtr4g114690 Medicago truncatula HOM05D001903 ORTHO05D001847 2.8e-15 87.0 226 38.1
Potri.018G130100 Populus trichocarpa HOM05D001903 ORTHO05D001847 6.3e-15 85.9 334 45.5
TWI34G1959 Tripterygium wilfordii HOM05D001903 ORTHO05D001847 6.9e-14 82.4 228 44.7
TPR.G26499 Trifolium pratense HOM05D001903 ORTHO05D001847 9.0e-14 82.0 226 34.1
CANSAT11G1026 Cannabis sativa HOM05D001903 ORTHO05D001847 2.0e-13 80.9 238 40.8
TWI63G1536 Tripterygium wilfordii HOM05D001903 ORTHO05D001847 2.0e-13 80.9 228 37.7
Aqoxy7G03684 Aquilegia oxysepala HOM05D001903 ORTHO05D001847 2.6e-13 80.5 225 33.8
Sabra18G0110600 Salix brachista HOM05D001903 ORTHO05D001847 5.9e-13 79.3 233 37.3
CiPaw.01G246800 Carya illinoinensis HOM05D001903 ORTHO05D001847 7.7e-13 79.0 230 43.5
FAN05G3945 Fragaria x ananassa HOM05D001903 ORTHO05D001847 7.7e-13 79.0 235 40.4
FAN02G2078 Fragaria x ananassa HOM05D001903 ORTHO05D001847 1.0e-12 78.6 233 32.6
MD15G1171400 Malus domestica HOM05D001903 ORTHO05D001847 1.0e-12 78.6 343 48.1
Thecc.06G022200 Theobroma cacao HOM05D001903 ORTHO05D001847 1.7e-12 77.8 225 36.0
Cfa001690 Carpinus fangiana HOM05D001903 ORTHO05D001847 2.9e-12 77.0 138 42.8
Dinv36512 Davidia involucrata HOM05D001903 ORTHO05D001847 2.9e-12 77.0 335 54.6
Sc14g0000200 Simmondsia chinensis HOM05D001903 ORTHO05D001847 3.8e-12 76.6 341 50.7
GSVIVG01017324001 Vitis vinifera HOM05D001903 ORTHO05D001847 3.8e-12 76.6 232 40.1
Psat4g038040 Pisum sativum HOM05D001903 ORTHO05D001847 5.0e-12 76.3 223 36.8
MD02G1030000 Malus domestica HOM05D001903 ORTHO05D001847 8.5e-12 75.5 234 39.3
Hma1.2p1_1144F.1_g261220 Hydrangea macrophylla HOM05D001903 ORTHO05D001847 1.1e-11 75.1 238 49.6
Dinv38116 Davidia involucrata HOM05D001903 ORTHO05D001847 1.4e-11 74.7 234 44.0
TWI32G1121 Tripterygium wilfordii HOM05D001903 ORTHO05D001847 1.4e-11 74.7 333 51.7
FvH4_6g29850 Fragaria vesca HOM05D001903 ORTHO05D001847 1.9e-11 74.3 235 37.0
FAN14G4643 Fragaria x ananassa HOM05D001903 ORTHO05D001847 1.9e-11 74.3 235 37.0
Gohir.A05G015600 Gossypium hirsutum HOM05D001903 ORTHO05D001847 1.9e-11 74.3 329 45.3
Ciclev10009189m.g Citrus clementina HOM05D001903 ORTHO05D001847 2.5e-11 73.9 222 38.7
Potri.018G130300 Populus trichocarpa HOM05D001903 ORTHO05D001847 2.5e-11 73.9 334 48.2
RcHm_v2.0_Chr2g0135711 Rosa chinensis HOM05D001903 ORTHO05D001847 2.5e-11 73.9 240 33.8
Duzib160G0284 Durio zibethinus HOM05D001903 ORTHO05D001847 3.2e-11 73.6 224 37.9
Duzib235G1087 Durio zibethinus HOM05D001903 ORTHO05D001847 3.2e-11 73.6 225 35.1
Gorai.009G016900 Gossypium raimondii HOM05D001903 ORTHO05D001847 5.5e-11 72.8 328 44.8
MSTRG.22740 Avicennia marina HOM05D001903 ORTHO05D001847 7.2e-11 72.4 219 39.3
Gohir.D05G016700 Gossypium hirsutum HOM05D001903 ORTHO05D001847 7.2e-11 72.4 329 44.7
THA.LOC104811030 Tarenaya hassleriana HOM05D001903 ORTHO05D001847 7.2e-11 72.4 231 36.4
HanXRQChr10g0315611 Helianthus annuus HOM05D001903 ORTHO05D001847 1.2e-10 71.6 328 43.9
CANSAT56G4355 Cannabis sativa HOM05D001903 ORTHO05D001847 1.6e-10 71.2 233 36.9
PSO170G5882 Papaver somniferum HOM05D001903 ORTHO05D001847 2.1e-10 70.9 237 31.6
Gohir.A05G126300 Gossypium hirsutum HOM05D001903 ORTHO05D001847 2.7e-10 70.5 225 29.3
Sabra18G0110800 Salix brachista HOM05D001903 ORTHO05D001847 2.7e-10 70.5 231 31.6
Gorai.009G131300 Gossypium raimondii HOM05D001903 ORTHO05D001847 3.6e-10 70.1 225 28.9
Lalb_Chr13g0301771 Lupinus albus HOM05D001903 ORTHO05D001847 3.6e-10 70.1 223 34.1
RcHm_v2.0_Chr2g0088211 Rosa chinensis HOM05D001903 ORTHO05D001847 3.6e-10 70.1 335 48.1
Peaxi162Scf00046g00818 Petunia axillaris HOM05D001903 ORTHO05D001847 6.1e-10 69.3 234 33.8
CDE06G1151 Ceratophyllum demersum HOM05D001903 ORTHO05D001847 7.9e-10 68.9 233 41.6
FAN09G4604 Fragaria x ananassa HOM05D001903 ORTHO05D001847 7.9e-10 68.9 234 35.5
Gohir.D05G127200 Gossypium hirsutum HOM05D001903 ORTHO05D001847 1.0e-09 68.6 225 28.4
CDE07G0415 Ceratophyllum demersum HOM05D001903 ORTHO05D001847 1.4e-09 68.2 232 41.8
HanXRQChr03g0062821 Helianthus annuus HOM05D001903 ORTHO05D001847 1.4e-09 68.2 227 37.9
Lj5A71G74 Lonicera japonica HOM05D001903 ORTHO05D001847 1.4e-09 68.2 221 35.3
TWI34G1251 Tripterygium wilfordii HOM05D001903 ORTHO05D001847 1.4e-09 68.2 220 41.4
Eucgr.C04231 Eucalyptus grandis HOM05D001903 ORTHO05D001847 1.8e-09 67.8 236 29.2
PSO017G0828 Papaver somniferum HOM05D001903 ORTHO05D001847 2.3e-09 67.4 231 36.4
THA.LOC104799641 Tarenaya hassleriana HOM05D001903 ORTHO05D001847 2.3e-09 67.4 232 35.8
Lsat_1_v5_gn_7_107661 Lactuca sativa HOM05D001903 ORTHO05D001847 3.0e-09 67.0 226 31.4
ClCG09G002900 Citrullus lanatus HOM05D001903 ORTHO05D001847 3.9e-09 66.6 239 36.8
COL.COLO4_12956 Corchorus olitorius HOM05D001903 ORTHO05D001847 3.9e-09 66.6 230 42.2
SGA_v2.0_scaffold5G02688 Striga asiatica HOM05D001903 ORTHO05D001847 3.9e-09 66.6 220 33.6
Nn1g02487 Nelumbo nucifera HOM05D001903 ORTHO05D001847 6.7e-09 65.9 190 39.5
Nitab4.5_0000028g0320 Nicotiana tabacum HOM05D001903 ORTHO05D001847 8.8e-09 65.5 231 39.4
Aqoxy3G02851 Aquilegia oxysepala HOM05D001903 ORTHO05D001847 1.1e-08 65.1 206 40.8
Sp6g24210 Schrenkiella parvula HOM05D001903 ORTHO05D001847 1.5e-08 64.7 228 31.6
EL10Ac8g18677 Beta vulgaris HOM05D001903 ORTHO05D001847 1.9e-08 64.3 219 45.7
Eucgr.C04230 Eucalyptus grandis HOM05D001903 ORTHO05D001847 1.9e-08 64.3 340 47.4
Ah.14g079690 Amaranthus hybridus HOM05D001903 ORTHO05D001847 3.3e-08 63.5 225 34.7
MELO3C023418.2 Cucumis melo HOM05D001903 ORTHO05D001847 3.3e-08 63.5 240 34.2
MSTRG.26417 Avicennia marina HOM05D001903 ORTHO05D001847 4.3e-08 63.2 230 30.0
Dinv08652 Davidia involucrata HOM05D001903 ORTHO05D001847 4.3e-08 63.2 230 38.3
Nitab4.5_0006833g0020 Nicotiana tabacum HOM05D001903 ORTHO05D001847 4.3e-08 63.2 233 38.6
PGR142G2496 Punica granatum HOM05D001903 ORTHO05D001847 4.3e-08 63.2 220 40.9
arahy.Tifrunner.gnm1.ann1.LW11C9 Arachis hypogaea HOM05D001903 ORTHO05D001847 5.7e-08 62.8 239 27.6
ClCG05G016900 Citrullus lanatus HOM05D001903 ORTHO05D001847 5.7e-08 62.8 33 81.8
Ciclev10009202m.g Citrus clementina HOM05D001903 ORTHO05D001847 5.7e-08 62.8 225 30.7
Aa31LG1G14000 Aethionema arabicum HOM05D001903 ORTHO05D001847 7.4e-08 62.4 229 31.0
Oeu045156.1 Olea europaea HOM05D001903 ORTHO05D001847 7.4e-08 62.4 219 36.1
Glyma.08G212300 Glycine max HOM05D001903 ORTHO05D001847 9.7e-08 62.0 230 33.0
A02p23820 Brassica napus HOM05D001903 ORTHO05D001847 1.3e-07 61.6 232 31.0
BraA02t07373Z Brassica rapa HOM05D001903 ORTHO05D001847 1.3e-07 61.6 232 31.0
MD17G1210200 Malus domestica HOM05D001903 ORTHO05D001847 1.3e-07 61.6 229 38.0
Manes.04G113400 Manihot esculenta HOM05D001903 ORTHO05D001847 1.3e-07 61.6 223 32.3
Prupe.3G085500 Prunus persica HOM05D001903 ORTHO05D001847 1.3e-07 61.6 227 30.0
Cc04_g04320 Coffea canephora HOM05D001903 ORTHO05D001847 1.7e-07 61.2 229 41.5
Glyma.13G165800 Glycine max HOM05D001903 ORTHO05D001847 1.7e-07 61.2 327 42.2
ATR1120G200 Amborella trichopoda HOM05D001903 ORTHO05D001847 2.2e-07 60.8 247 32.0
BcaB05g22864 Brassica carinata HOM05D001903 ORTHO05D001847 2.2e-07 60.8 232 30.6
CARHR192630 Cardamine hirsuta HOM05D001903 ORTHO05D001847 2.2e-07 60.8 231 32.0
Haze_21522 Corylus avellana HOM05D001903 ORTHO05D001847 2.2e-07 60.8 33 84.8
Nitab4.5_0007793g0020 Nicotiana tabacum HOM05D001903 ORTHO05D001847 2.2e-07 60.8 229 39.7
Migut.I00772 Erythranthe guttata HOM05D001903 ORTHO05D001847 2.8e-07 60.5 230 36.5
Potri.006G254300 Populus trichocarpa HOM05D001903 ORTHO05D001847 2.8e-07 60.5 33 84.8
A10p19730 Brassica napus HOM05D001903 ORTHO05D001847 3.7e-07 60.1 230 32.2
ClCG11G003130 Citrullus lanatus HOM05D001903 ORTHO05D001847 3.7e-07 60.1 226 30.1
Atru.chr7.2423 Acer truncatum HOM05D001903 ORTHO05D001847 4.8e-07 59.7 33 78.8
Actinidia07422 Actinidia chinensis HOM05D001903 ORTHO05D001847 4.8e-07 59.7 245 42.9
arahy.Tifrunner.gnm1.ann1.UKR13J Arachis hypogaea HOM05D001903 ORTHO05D001847 4.8e-07 59.7 239 27.2
FAN28G1057 Fragaria x ananassa HOM05D001903 ORTHO05D001847 4.8e-07 59.7 234 41.0
Sed0013088 Sechium edule HOM05D001903 ORTHO05D001847 4.8e-07 59.7 33 75.8
BcaB01g04798 Brassica carinata HOM05D001903 ORTHO05D001847 1.4e-06 58.2 228 36.0
Manes.03G015000 Manihot esculenta HOM05D001903 ORTHO05D001847 1.4e-06 58.2 33 78.8
Phvul.003G165900 Phaseolus vulgaris HOM05D001903 ORTHO05D001847 1.4e-06 58.2 221 33.5
MSTRG.11137 Avicennia marina HOM05D001903 ORTHO05D001847 1.8e-06 57.8 219 30.6
BraA10t44049Z Brassica rapa HOM05D001903 ORTHO05D001847 1.8e-06 57.8 230 32.2
Thhalv10014275m.g Eutrema salsugineum HOM05D001903 ORTHO05D001847 1.8e-06 57.8 233 31.3
Gohir.D07G032100 Gossypium hirsutum HOM05D001903 ORTHO05D001847 1.8e-06 57.8 221 30.3
Gorai.001G033500 Gossypium raimondii HOM05D001903 ORTHO05D001847 1.8e-06 57.8 221 29.0
Hund09255 Selenicereus undatus HOM05D001903 ORTHO05D001847 1.8e-06 57.8 221 38.0
BcaC03g16002 Brassica carinata HOM05D001903 ORTHO05D001847 2.4e-06 57.4 232 30.6
BolC2t09769H Brassica oleracea HOM05D001903 ORTHO05D001847 2.4e-06 57.4 232 30.6
CsaV3_7G032430 Cucumis sativus L. HOM05D001903 ORTHO05D001847 2.4e-06 57.4 240 33.8
Cc06_g08340 Coffea canephora HOM05D001903 ORTHO05D001847 3.1e-06 57.0 232 30.6
Lsat_1_v5_gn_5_95540 Lactuca sativa HOM05D001903 ORTHO05D001847 4.1e-06 56.6 222 38.3
MSTRG.22741 Avicennia marina HOM05D001903 ORTHO05D001847 5.3e-06 56.2 219 36.5
BcaC08g47574 Brassica carinata HOM05D001903 ORTHO05D001847 5.3e-06 56.2 231 27.3
C06p54220 Brassica napus HOM05D001903 ORTHO05D001847 5.3e-06 56.2 231 27.3
CSS0046247 Camellia sinensis var. sinensis HOM05D001903 ORTHO05D001847 5.3e-06 56.2 33 78.8
CARHR074370 Cardamine hirsuta HOM05D001903 ORTHO05D001847 5.3e-06 56.2 234 32.5
Duzib150G1231 Durio zibethinus HOM05D001903 ORTHO05D001847 5.3e-06 56.2 33 75.8
ECA234G1203 Erigeron canadensis HOM05D001903 ORTHO05D001847 6.9e-06 55.8 138 71.0
Gohir.A06G114700 Gossypium hirsutum HOM05D001903 ORTHO05D036033 6.9e-06 55.8 229 35.4
Gohir.D06G100100 Gossypium hirsutum HOM05D001903 ORTHO05D001847 6.9e-06 55.8 33 75.8
Gorai.010G115000 Gossypium raimondii HOM05D001903 ORTHO05D001847 6.9e-06 55.8 33 75.8
Sabra06G0198700 Salix brachista HOM05D001903 ORTHO05D001847 6.9e-06 55.8 33 78.8
Cpa.g.sc10.261 Carica papaya HOM05D001903 ORTHO05D001847 9.1e-06 55.5 222 30.2
FvH4_1g03080 Fragaria vesca HOM05D001903 ORTHO05D001847 9.1e-06 55.5 245 39.2
Glyma.17G113600 Glycine max HOM05D001903 ORTHO05D001847 9.1e-06 55.5 222 37.8
Sp5g35670 Schrenkiella parvula HOM05D001903 ORTHO05D001847 9.1e-06 55.5 234 27.8
SGA_v2.0_scaffold37G14772 Striga asiatica HOM05D001903 ORTHO05D001847 9.1e-06 55.5 223 30.9
VMungo1215G2575 Vigna mungo HOM05D001903 ORTHO05D001847 9.1e-06 55.5 222 27.9


User provided reference genes

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