Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0017402 Camellia sinensis var. sinensis HOM05D005842 ORTHO05D007077 1.3e-39 166.0 86 100.0
Actinidia11383 Actinidia chinensis HOM05D005842 ORTHO05D007077 6.3e-31 137.1 81 85.2
Actinidia39941 Actinidia chinensis HOM05D005842 ORTHO05D007077 6.3e-31 137.1 81 85.2
Actinidia25095 Actinidia chinensis HOM05D005842 ORTHO05D007077 1.1e-30 136.3 81 82.7
CSS0006411 Camellia sinensis var. sinensis HOM05D005842 ORTHO05D007077 1.1e-30 136.3 81 86.4
Hma1.2p1_0112F.1_g055010 Hydrangea macrophylla HOM05D005842 ORTHO05D007077 1.0e-28 129.8 84 75.0
Dinv27137 Davidia involucrata HOM05D005842 ORTHO05D007077 2.2e-28 128.6 84 75.0
Dinv29780 Davidia involucrata HOM05D005842 ORTHO05D007077 4.8e-23 110.9 91 64.8
Dinv29781 Davidia involucrata HOM05D005842 ORTHO05D007077 6.3e-23 110.5 98 61.2
Migut.H00813 Erythranthe guttata HOM05D005842 ORTHO05D007077 1.0e-20 103.2 85 62.4
Migut.N00324 Erythranthe guttata HOM05D005842 ORTHO05D007077 8.5e-20 100.1 85 62.4
PGSC0003DMG400027164 Solanum tuberosum HOM05D005842 ORTHO05D007077 1.1e-19 99.8 88 58.0
MD13G1226500 Malus domestica HOM05D005842 ORTHO05D007077 7.2e-19 97.1 87 62.1
Prupe.1G053900 Prunus persica HOM05D005842 ORTHO05D007077 9.4e-19 96.7 87 60.9
MD16G1231600 Malus domestica HOM05D005842 ORTHO05D007077 1.2e-18 96.3 87 60.9
Nitab4.5_0001769g0190 Nicotiana tabacum HOM05D005842 ORTHO05D007077 2.1e-18 95.5 89 53.9
PSO832G1240 Papaver somniferum HOM05D005842 ORTHO05D007077 1.8e-17 92.4 86 55.8
Cc03_g06880 Coffea canephora HOM05D005842 ORTHO05D007077 8.8e-17 90.1 85 54.1
Cc03_g06890 Coffea canephora HOM05D005842 ORTHO05D007077 8.8e-17 90.1 85 54.1
Cc03_g06900 Coffea canephora HOM05D005842 ORTHO05D007077 8.8e-17 90.1 85 54.1
Cc03_g06910 Coffea canephora HOM05D005842 ORTHO05D007077 8.8e-17 90.1 85 54.1
Cc03_g06920 Coffea canephora HOM05D005842 ORTHO05D007077 8.8e-17 90.1 85 54.1
Cc03_g06930 Coffea canephora HOM05D005842 ORTHO05D007077 8.8e-17 90.1 85 54.1
Cc03_g06940 Coffea canephora HOM05D005842 ORTHO05D007077 8.8e-17 90.1 85 54.1
Cc03_g06950 Coffea canephora HOM05D005842 ORTHO05D007077 8.8e-17 90.1 85 54.1
CAN.G305.25 Capsicum annuum HOM05D005842 ORTHO05D007077 7.5e-16 87.0 89 51.7
Cc00_g17210 Coffea canephora HOM05D005842 ORTHO05D007077 2.2e-15 85.5 85 54.1
TAR633G2520 Trochodendron aralioides HOM05D005842 ORTHO05D007077 2.8e-15 85.1 85 52.9
BcaB03g16079 Brassica carinata HOM05D005842 ORTHO05D007077 6.3e-15 84.0 107 45.8
Ca_26210_v3 Cicer arietinum L. HOM05D005842 ORTHO05D007077 1.4e-14 82.8 89 50.6
SpUn0225_0010 Schrenkiella parvula HOM05D005842 ORTHO05D007077 1.4e-14 82.8 107 45.8
THA.LOC104821628 Tarenaya hassleriana HOM05D005842 ORTHO05D007077 1.4e-14 82.8 83 55.4
PGSC0003DMG404001548 Solanum tuberosum HOM05D005842 ORTHO05D007077 3.1e-14 81.6 89 52.8
ClCG05G003830 Citrullus lanatus HOM05D005842 ORTHO05D007077 4.1e-14 81.3 75 54.7
Atru.chr4.1869 Acer truncatum HOM05D005842 ORTHO05D007077 7.0e-14 80.5 87 55.2
SHI18628 Sapria himalayana HOM05D005842 ORTHO05D007077 7.0e-14 80.5 87 52.9
Atru.chr4.1859_Atru.chr4.1858 Acer truncatum HOM05D005842 ORTHO05D007077 9.1e-14 80.1 87 55.2
Atru.chr4.1868 Acer truncatum HOM05D005842 ORTHO05D007077 9.1e-14 80.1 87 55.2
Nn1g03040 Nelumbo nucifera HOM05D005842 ORTHO05D007077 9.1e-14 80.1 82 48.8
Sopen05g031940 Solanum pennellii HOM05D005842 ORTHO05D007077 9.1e-14 80.1 88 50.0
Solyc09g091040.3 Solanum lycopersicum HOM05D005842 ORTHO05D007077 1.2e-13 79.7 89 50.6
Glyma.10G130600 Glycine max HOM05D005842 ORTHO05D007077 1.6e-13 79.3 87 54.0
Glyma.20G081400 Glycine max HOM05D005842 ORTHO05D007077 1.6e-13 79.3 87 54.0
Sopen09g034020 Solanum pennellii HOM05D005842 ORTHO05D007077 2.7e-13 78.6 89 50.6
Nn1g03041 Nelumbo nucifera HOM05D005842 ORTHO05D007077 3.5e-13 78.2 85 47.1
Solyc05g053450.3 Solanum lycopersicum HOM05D005842 ORTHO05D007077 3.5e-13 78.2 88 47.7
Rhsim09G0044300 Rhododendron simsii HOM05D005842 ORTHO05D007077 4.5e-13 77.8 85 51.8
BcaC02g09413 Brassica carinata HOM05D005842 ORTHO05D007077 7.7e-13 77.0 107 43.0
BcaC02g09414 Brassica carinata HOM05D005842 ORTHO05D007077 7.7e-13 77.0 107 43.0
BcaC02g09415 Brassica carinata HOM05D005842 ORTHO05D007077 7.7e-13 77.0 107 43.0
Lj6g0013781 Lotus japonicus HOM05D005842 ORTHO05D007077 1.0e-12 76.6 87 48.3
PSO210G3477 Papaver somniferum HOM05D005842 ORTHO05D007077 2.3e-12 75.5 86 48.8
PSO210G4408 Papaver somniferum HOM05D005842 ORTHO05D007077 2.3e-12 75.5 86 48.8
PSO764G0017 Papaver somniferum HOM05D005842 ORTHO05D007077 2.3e-12 75.5 86 48.8
TWI09G0179 Tripterygium wilfordii HOM05D005842 ORTHO05D007077 2.3e-12 75.5 87 48.3
A04p08620 Brassica napus HOM05D005842 ORTHO05D007077 2.9e-12 75.1 108 43.5
BraA04t16556Z Brassica rapa HOM05D005842 ORTHO05D007077 2.9e-12 75.1 108 43.5
Nn1g03042 Nelumbo nucifera HOM05D005842 ORTHO05D007077 2.9e-12 75.1 82 48.8
Nn1g03039 Nelumbo nucifera HOM05D005842 ORTHO05D007077 5.0e-12 74.3 82 48.8
Peaxi162Scf01007g00004 Petunia axillaris HOM05D005842 ORTHO05D007077 5.0e-12 74.3 90 47.8
Nitab4.5_0000867g0010 Nicotiana tabacum HOM05D000404 ORTHO05D001765 6.6e-12 73.9 88 50.0
Sabra10G0084400 Salix brachista HOM05D003281 ORTHO05D004128 6.6e-12 73.9 83 49.4
Thhalv10026478m.g Eutrema salsugineum HOM05D005842 ORTHO05D007077 1.1e-11 73.2 107 42.1
Potri.010G062800 Populus trichocarpa HOM05D005842 ORTHO05D007077 1.1e-11 73.2 91 47.3
Sabra10G0043900 Salix brachista HOM05D005842 ORTHO05D007077 1.1e-11 73.2 83 48.2
BcaC02g09416 Brassica carinata HOM05D005842 ORTHO05D007077 5.5e-11 70.9 90 44.4
BcaB04g17686 Brassica carinata HOM05D005842 ORTHO05D007077 1.2e-10 69.7 107 41.1
C04p42360 Brassica napus HOM05D005842 ORTHO05D007077 1.2e-10 69.7 99 43.4
PSO384G5008 Papaver somniferum HOM05D005842 ORTHO05D007077 2.1e-10 68.9 90 46.7
Peaxi162Scf00164g00112 Petunia axillaris HOM05D005842 ORTHO05D007077 2.1e-10 68.9 72 47.2
BcaC07g37350 Brassica carinata HOM05D005842 ORTHO05D007077 2.8e-10 68.6 107 40.2
Oeu007544.1 Olea europaea HOM05D005842 ORTHO05D007077 2.8e-10 68.6 57 57.9
TAR362G0228 Trochodendron aralioides HOM05D005842 ORTHO05D007077 2.8e-10 68.6 85 45.9
AL7G43170 Arabidopsis lyrata HOM05D005842 ORTHO05D007077 3.6e-10 68.2 107 40.2
PSO384G4311 Papaver somniferum HOM05D005842 ORTHO05D007077 3.6e-10 68.2 85 44.7
PSO266G0009 Papaver somniferum HOM05D005842 ORTHO05D007077 6.1e-10 67.4 90 45.6
PSO266G0028 Papaver somniferum HOM05D005842 ORTHO05D007077 6.1e-10 67.4 90 45.6
Aa31LG9G4090 Aethionema arabicum HOM05D005842 ORTHO05D007077 8.0e-10 67.0 118 36.4
A08p06740 Brassica napus HOM05D005842 ORTHO05D007077 1.0e-09 66.6 108 40.7
BolC8t47646H Brassica oleracea HOM05D005842 ORTHO05D007077 1.0e-09 66.6 108 40.7
BraA08t32692Z Brassica rapa HOM05D005842 ORTHO05D007077 1.0e-09 66.6 108 40.7
C03p53480 Brassica napus HOM05D005842 ORTHO05D007077 1.8e-09 65.9 74 44.6
CARHR219200 Cardamine hirsuta HOM05D005842 ORTHO05D007077 1.8e-09 65.9 107 40.2
BcaB06g26603 Brassica carinata HOM05D005842 ORTHO05D007077 3.0e-09 65.1 73 46.6
SalBow2G2733 Salvia bowleyana HOM05D005842 ORTHO05D007077 3.0e-09 65.1 88 47.7
AT4G13560 Arabidopsis thaliana HOM05D005842 ORTHO05D007077 6.8e-09 63.9 107 38.3
BcaC06g35667 Brassica carinata HOM05D003628 ORTHO05D004253 6.8e-09 63.9 73 45.2
Lalb_Chr01g0011321 Lupinus albus HOM05D005842 ORTHO05D007077 6.8e-09 63.9 73 49.3
arahy.Tifrunner.gnm1.ann1.LRUD7W Arachis hypogaea HOM05D005842 ORTHO05D007077 8.9e-09 63.5 84 46.4
Peaxi162Scf00125g01021 Petunia axillaris HOM05D005842 ORTHO05D007077 8.9e-09 63.5 88 47.7
Atru.chr13.2235 Acer truncatum HOM05D005842 ORTHO05D007077 1.2e-08 63.2 73 46.6
CsaV3_2G012270 Cucumis sativus L. HOM05D005842 ORTHO05D007077 1.2e-08 63.2 94 45.7
Sed0010218 Sechium edule HOM05D005842 ORTHO05D007077 1.5e-08 62.8 83 43.4
arahy.Tifrunner.gnm1.ann1.GMD4I9 Arachis hypogaea HOM05D005842 ORTHO05D007077 2.0e-08 62.4 86 45.3
arahy.Tifrunner.gnm1.ann1.Q9KDDQ Arachis hypogaea HOM05D005842 ORTHO05D007077 2.0e-08 62.4 84 45.2
Phvul.007G233000 Phaseolus vulgaris HOM05D005842 ORTHO05D007077 2.6e-08 62.0 87 43.7
Sopen12g032850 Solanum pennellii HOM05D005842 ORTHO05D007077 2.6e-08 62.0 86 44.2
arahy.Tifrunner.gnm1.ann1.JU0LD9 Arachis hypogaea HOM05D005842 ORTHO05D007077 3.4e-08 61.6 86 45.3
CANSAT78G1849 Cannabis sativa HOM05D005842 ORTHO05D007077 4.4e-08 61.2 107 38.3
C08p07940 Brassica napus HOM05D005842 ORTHO05D007077 5.7e-08 60.8 42 69.0
Medtr1g045980 Medicago truncatula HOM05D005842 ORTHO05D007077 7.5e-08 60.5 122 32.0
Solyc12g097050.2 Solanum lycopersicum HOM05D005842 ORTHO05D007077 7.5e-08 60.5 86 43.0
ATR0787G056 Amborella trichopoda HOM05D005842 ORTHO05D007077 1.7e-07 59.3 82 40.2
CANSAT78G1061 Cannabis sativa HOM05D005842 ORTHO05D007077 2.8e-07 58.5 101 35.6
PGSC0003DMG400008623 Solanum tuberosum HOM05D005842 ORTHO05D007077 3.7e-07 58.2 86 41.9
A07p08140 Brassica napus HOM05D005842 ORTHO05D007077 4.9e-07 57.8 82 42.7
C07p12280 Brassica napus HOM05D005842 ORTHO05D007077 4.9e-07 57.8 82 42.7
BolC7t41695H Brassica oleracea HOM05D005842 ORTHO05D007077 4.9e-07 57.8 82 42.7
BraA07t28597Z Brassica rapa HOM05D005842 ORTHO05D007077 4.9e-07 57.8 82 42.7
Carub.0007s2898 Capsella rubella HOM05D005842 ORTHO05D007077 6.3e-07 57.4 107 35.5
HPP92_007288 Vanilla planifolia HOM05D005842 ORTHO05D007077 6.3e-07 57.4 99 36.4
MBI10_g16785_MAGBIO Magnolia biondii HOM05D005842 ORTHO05D007077 1.8e-06 55.8 91 38.5
MBI10_g16786_MAGBIO Magnolia biondii HOM05D005842 ORTHO05D007077 1.8e-06 55.8 91 38.5
PGR142G0529 Punica granatum HOM05D005842 ORTHO05D007077 1.8e-06 55.8 83 43.4
Cfa014832 Carpinus fangiana HOM05D005842 ORTHO05D007077 2.4e-06 55.5 107 35.5
THA.LOC104810501 Tarenaya hassleriana HOM05D008630 ORTHO05D010727 3.1e-06 55.1 83 43.4
Eucgr.F02549 Eucalyptus grandis HOM05D008630 ORTHO05D010727 4.1e-06 54.7 74 43.2
Psat6g108960 Pisum sativum HOM05D005842 ORTHO05D007077 4.1e-06 54.7 139 31.7
MELO3C023400.2 Cucumis melo HOM05D008630 ORTHO05D010727 7.0e-06 53.9 73 43.8
Medtr1g045950 Medicago truncatula HOM05D005842 ORTHO05D007077 9.2e-06 53.5 36 66.7
Potri.001G172900 Populus trichocarpa HOM05D008630 ORTHO05D010727 9.2e-06 53.5 74 44.6
TWI18G0017 Tripterygium wilfordii HOM05D008630 ORTHO05D010727 9.2e-06 53.5 77 45.5


User provided reference genes

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