Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0017383 Camellia sinensis var. sinensis HOM05D000034 ORTHO05D010947 1.2e-135 486.5 248 100.0
CSS0009964 Camellia sinensis var. sinensis HOM05D000034 ORTHO05D010947 3.5e-106 388.7 232 86.6
CSS0010215 Camellia sinensis var. sinensis HOM05D000034 ORTHO05D010947 5.0e-105 384.8 232 85.8
CSS0050060 Camellia sinensis var. sinensis HOM05D000034 ORTHO05D010947 2.5e-96 355.9 273 72.5
CSS0000995 Camellia sinensis var. sinensis HOM05D000034 ORTHO05D010947 1.8e-94 349.7 262 74.0
CSS0045906 Camellia sinensis var. sinensis HOM05D000034 ORTHO05D010947 2.4e-91 339.3 213 84.5
CSS0038593 Camellia sinensis var. sinensis HOM05D000034 ORTHO05D010947 1.0e-89 334.0 269 68.8
CSS0050109 Camellia sinensis var. sinensis HOM05D000034 ORTHO05D000140 1.0e-86 323.9 280 66.8
CSS0006667 Camellia sinensis var. sinensis HOM05D000034 ORTHO05D010947 8.3e-76 287.7 271 64.2
CSS0040161 Camellia sinensis var. sinensis HOM05D000034 ORTHO05D010947 1.3e-73 280.4 233 68.7
CSS0015461 Camellia sinensis var. sinensis HOM05D000034 ORTHO05D010947 1.3e-65 253.8 256 59.0
CSS0026146 Camellia sinensis var. sinensis HOM05D000034 ORTHO05D010947 4.4e-61 238.8 192 71.4
Hma1.2p1_0035F.1_g021930 Hydrangea macrophylla HOM05D000034 ORTHO05D000037 5.8e-61 238.4 307 45.6
CSS0048435 Camellia sinensis var. sinensis HOM05D000034 ORTHO05D010947 6.4e-60 235.0 266 55.6
Hma1.2p1_0131F.1_g060610 Hydrangea macrophylla HOM05D000034 ORTHO05D010947 1.3e-47 194.1 200 52.0
CSS0048922 Camellia sinensis var. sinensis HOM05D000034 ORTHO05D010947 2.1e-47 193.4 204 55.9
CSS0042933 Camellia sinensis var. sinensis HOM05D000034 ORTHO05D010947 6.0e-42 175.3 151 62.9
Hma1.2p1_0949F.1_g240650 Hydrangea macrophylla HOM05D000034 ORTHO05D010947 4.0e-38 162.5 164 51.8
CSS0044283 Camellia sinensis var. sinensis HOM05D000034 ORTHO05D010947 2.3e-33 146.7 109 73.4
Hma1.2p1_0340F.1_g129910 Hydrangea macrophylla HOM05D000034 ORTHO05D010947 7.9e-26 121.7 98 62.2
Hma1.2p1_1271F.1_g271740 Hydrangea macrophylla HOM05D000034 ORTHO05D010947 1.1e-24 117.9 96 61.5
Hma1.2p1_2873F.1_g329710 Hydrangea macrophylla HOM05D000034 ORTHO05D010947 1.3e-23 114.4 91 62.6
vmacro05860 Vaccinium macrocarpon HOM05D000034 ORTHO05D002688 7.9e-18 95.1 278 28.8
Hund10328 Selenicereus undatus HOM05D000034 ORTHO05D010947 1.7e-15 87.4 134 40.3
Hma1.2p1_0187F.1_g082350 Hydrangea macrophylla HOM05D000034 ORTHO05D000037 2.2e-15 87.0 305 25.2
Hma1.2p1_0076F.1_g039500 Hydrangea macrophylla HOM05D000034 ORTHO05D000037 1.4e-14 84.3 277 28.2
Hund03621 Selenicereus undatus HOM05D000034 ORTHO05D010947 3.1e-14 83.2 186 31.2
Rhsim12G0045600 Rhododendron simsii HOM05D000034 ORTHO05D002688 5.3e-14 82.4 288 27.1
Hma1.2p1_1109F.1_g257970 Hydrangea macrophylla HOM05D005504 ORTHO05D002688 2.6e-13 80.1 291 27.1
Hund01843 Selenicereus undatus HOM05D012237 ORTHO05D010947 2.6e-13 80.1 255 29.0
Hma1.2p1_1121F.1_g259230 Hydrangea macrophylla HOM05D000034 ORTHO05D000037 1.7e-12 77.4 234 28.6
CSS0030175 Camellia sinensis var. sinensis HOM05D000034 ORTHO05D010947 2.2e-12 77.0 119 43.7
HanXRQChr12g0355561 Helianthus annuus HOM05D005504 ORTHO05D002688 3.8e-12 76.3 297 24.2
Ah.01g010920 Amaranthus hybridus HOM05D005504 ORTHO05D002688 8.5e-12 75.1 291 25.4
CSS0018738 Camellia sinensis var. sinensis HOM05D000034 ORTHO05D010947 1.4e-11 74.3 40 87.5
Ah.10g026380 Amaranthus hybridus HOM05D005504 ORTHO05D002688 2.5e-11 73.6 291 25.1
DCAR_005138 Daucus carota HOM05D000034 ORTHO05D002688 2.5e-11 73.6 234 29.1
EL10Ac6g13234 Beta vulgaris HOM05D000034 ORTHO05D002688 3.2e-11 73.2 284 25.4
Peaxi162Scf00002g00292 Petunia axillaris HOM05D008574 ORTHO05D010611 4.2e-11 72.8 179 31.8
Atru.chr1.2748 Acer truncatum HOM05D005504 ORTHO05D002688 7.2e-11 72.0 216 24.5
CSS0041263 Camellia sinensis var. sinensis HOM05D000034 ORTHO05D002688 2.7e-10 70.1 278 25.9
EL10Ac7g17364 Beta vulgaris HOM05D005504 ORTHO05D002688 3.6e-10 69.7 275 24.0
ECA233G4621 Erigeron canadensis HOM05D000911 ORTHO05D000890 6.1e-10 68.9 223 27.4
arahy.Tifrunner.gnm1.ann1.PAB5ST Arachis hypogaea HOM05D000034 ORTHO05D002688 1.0e-09 68.2 174 28.2
Hma1.2p1_0008F-2.1_g005830 Hydrangea macrophylla HOM05D000034 ORTHO05D000037 1.0e-09 68.2 168 32.1
CSS0036183 Camellia sinensis var. sinensis HOM05D005504 ORTHO05D002688 1.4e-09 67.8 178 28.1
Potri.005G252500 Populus trichocarpa HOM05D005504 ORTHO05D002688 1.8e-09 67.4 200 30.0
CSS0028977 Camellia sinensis var. sinensis HOM05D005504 ORTHO05D002688 3.0e-09 66.6 284 23.2
CSS0040739 Camellia sinensis var. sinensis HOM05D000034 ORTHO05D010947 3.9e-09 66.2 40 87.5
ECA233G3708 Erigeron canadensis HOM05D004228 ORTHO05D005137 6.7e-09 65.5 223 27.4
EL10Ac4g08776 Beta vulgaris HOM05D005504 ORTHO05D002688 8.8e-09 65.1 282 23.8
Lsat_1_v5_gn_9_108520 Lactuca sativa HOM05D056539 ORTHO05D002688 8.8e-09 65.1 236 25.4
Medtr5g025995 Medicago truncatula HOM05D005504 ORTHO05D002688 8.8e-09 65.1 274 27.4
AUR62040606 Chenopodium quinoa HOM05D000034 ORTHO05D000037 1.1e-08 64.7 233 22.3
ECA238G4441 Erigeron canadensis HOM05D000034 ORTHO05D000562 2.0e-08 63.9 113 31.9
Atru.chr4.843 Acer truncatum HOM05D000034 ORTHO05D002688 2.6e-08 63.5 185 25.9
CSS0010294 Camellia sinensis var. sinensis HOM05D000034 ORTHO05D002688 3.3e-08 63.2 263 25.9
Atru.chr5.1596 Acer truncatum HOM05D005504 ORTHO05D002688 4.4e-08 62.8 185 25.9
vmacro21865 Vaccinium macrocarpon HOM05D000665 ORTHO05D002688 1.7e-07 60.8 195 30.3
arahy.Tifrunner.gnm1.ann1.GG48NL Arachis hypogaea HOM05D000034 ORTHO05D000037 2.8e-07 60.1 233 22.7
ECA232G3538 Erigeron canadensis HOM05D005504 ORTHO05D002688 2.8e-07 60.1 312 24.0
CSS0023971 Camellia sinensis var. sinensis HOM05D000034 ORTHO05D010947 4.8e-07 59.3 40 80.0
Hma1.2p1_0018F.1_g013500 Hydrangea macrophylla HOM05D000034 ORTHO05D000037 4.8e-07 59.3 192 26.0
vmacro23405 Vaccinium macrocarpon HOM05D000665 ORTHO05D002688 4.8e-07 59.3 194 29.9
Ah.05g174390 Amaranthus hybridus HOM05D005504 ORTHO05D002688 6.3e-07 58.9 119 33.6
Sc05g0005210 Simmondsia chinensis HOM05D000034 ORTHO05D010947 6.3e-07 58.9 58 50.0
CSS0029785 Camellia sinensis var. sinensis HOM05D000034 ORTHO05D010947 8.2e-07 58.5 40 75.0
Hma1.2p1_0301F.1_g118220 Hydrangea macrophylla HOM05D005504 ORTHO05D002688 1.4e-06 57.8 200 29.0
Peaxi162Scf00008g00018 Petunia axillaris HOM05D008574 ORTHO05D010611 1.4e-06 57.8 178 29.8
QL02p021656 Quercus lobata HOM05D000034 ORTHO05D000037 1.4e-06 57.8 128 32.0
Hund22994 Selenicereus undatus HOM05D012237 ORTHO05D010947 1.8e-06 57.4 51 45.1
arahy.Tifrunner.gnm1.ann1.C19S8A Arachis hypogaea HOM05D000034 ORTHO05D000037 2.4e-06 57.0 233 21.9
arahy.Tifrunner.gnm1.ann1.TXJ7KC Arachis hypogaea HOM05D000034 ORTHO05D002688 3.1e-06 56.6 234 22.6
arahy.Tifrunner.gnm1.ann1.WRA5CI Arachis hypogaea HOM05D000034 ORTHO05D002688 3.1e-06 56.6 134 29.9
Duzib093G0882 Durio zibethinus HOM05D005504 ORTHO05D002688 4.1e-06 56.2 282 23.4
QL09p005462 Quercus lobata HOM05D000034 ORTHO05D000037 4.1e-06 56.2 128 31.2
Hund18367 Selenicereus undatus HOM05D012237 ORTHO05D010947 4.1e-06 56.2 52 46.2
arahy.Tifrunner.gnm1.ann1.A110NB Arachis hypogaea HOM05D000034 ORTHO05D002688 5.3e-06 55.8 233 21.9
Lsat_1_v5_gn_6_26421 Lactuca sativa HOM05D000034 ORTHO05D000277 7.0e-06 55.5 167 27.5
AUR62008529 Chenopodium quinoa HOM05D005504 ORTHO05D002688 9.1e-06 55.1 252 25.4


User provided reference genes

Program Settings