Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0017360 Camellia sinensis var. sinensis HOM05D005938 ORTHO05D007654 4.4e-175 617.8 313 100.0
CSS0040883 Camellia sinensis var. sinensis HOM05D005938 ORTHO05D007654 4.4e-175 617.8 313 100.0
Actinidia34992 Actinidia chinensis HOM05D005938 ORTHO05D007654 1.9e-138 496.1 315 80.0
Rhsim12G0157100 Rhododendron simsii HOM05D005938 ORTHO05D007654 4.2e-133 478.4 319 77.4
Lj1g0012745 Lotus japonicus HOM05D005938 ORTHO05D007654 3.8e-126 455.3 306 73.2
vmacro16554 Vaccinium macrocarpon HOM05D005938 ORTHO05D007654 3.8e-126 455.3 350 70.3
Atru.chr9.2268 Acer truncatum HOM05D005938 ORTHO05D007654 5.0e-126 454.9 318 72.6
Sc10g0009920 Simmondsia chinensis HOM05D005938 ORTHO05D007654 8.5e-126 454.1 318 73.3
GSVIVG01008024001 Vitis vinifera HOM05D005938 ORTHO05D007654 2.7e-124 449.1 312 73.7
Gohir.D12G179280 Gossypium hirsutum HOM05D005938 ORTHO05D007654 4.7e-124 448.4 314 72.3
PGSC0003DMG400000598 Solanum tuberosum HOM05D005938 ORTHO05D007654 4.7e-124 448.4 307 73.3
TAR374G0085 Trochodendron aralioides HOM05D005938 ORTHO05D007654 1.8e-123 446.4 312 72.8
QL10p016543 Quercus lobata HOM05D005938 ORTHO05D007654 1.5e-122 443.4 301 76.1
Gohir.A12G176500 Gossypium hirsutum HOM05D005938 ORTHO05D007654 7.4e-122 441.0 315 70.8
PGR083G1660 Punica granatum HOM05D005938 ORTHO05D007654 8.2e-121 437.6 314 72.3
CiPaw.11G042800 Carya illinoinensis HOM05D005938 ORTHO05D007654 1.8e-120 436.4 315 70.8
Ca_13688_v3 Cicer arietinum L. HOM05D005938 ORTHO05D007654 2.4e-120 436.0 308 70.5
Lj9A462G75 Lonicera japonica HOM05D005938 ORTHO05D007654 4.1e-120 435.3 283 75.3
Lalb_Chr08g0235801 Lupinus albus HOM05D005938 ORTHO05D007654 4.1e-120 435.3 308 71.1
Nitab4.5_0004103g0010 Nicotiana tabacum HOM05D005938 ORTHO05D007654 5.3e-120 434.9 313 70.0
Solyc03g116330.3 Solanum lycopersicum HOM05D005938 ORTHO05D007654 1.5e-119 433.3 307 71.3
Glyma.06G192800 Glycine max HOM05D005938 ORTHO05D007654 2.6e-119 432.6 306 71.9
Ciclev10021191m.g Citrus clementina HOM05D005938 ORTHO05D007654 3.4e-119 432.2 313 70.9
CAN.G407.117 Capsicum annuum HOM05D005938 ORTHO05D007654 5.9e-119 431.4 307 71.3
Cc04_g16920 Coffea canephora HOM05D005938 ORTHO05D007654 1.7e-118 429.9 311 70.4
Prupe.5G190900 Prunus persica HOM05D005938 ORTHO05D007654 1.1e-117 427.2 308 69.8
CsaV3_1G002270 Cucumis sativus L. HOM05D005938 ORTHO05D007654 2.5e-117 426.0 309 69.9
TPR.G11812 Trifolium pratense HOM05D005938 ORTHO05D007654 3.2e-117 425.6 300 70.0
CANSAT80G1410 Cannabis sativa HOM05D005938 ORTHO05D007654 4.2e-117 425.2 312 68.9
MSTRG.9633 Avicennia marina HOM05D005938 ORTHO05D007654 1.2e-116 423.7 316 66.8
Phvul.009G188150 Phaseolus vulgaris HOM05D005938 ORTHO05D007654 1.2e-116 423.7 308 69.5
Sed0010411 Sechium edule HOM05D005938 ORTHO05D007654 3.6e-116 422.2 313 69.6
TAR622G1433 Trochodendron aralioides HOM05D005938 ORTHO05D007654 3.6e-116 422.2 282 75.9
Peaxi162Scf00274g00846 Petunia axillaris HOM05D005938 ORTHO05D007654 6.1e-116 421.4 313 70.0
Nitab4.5_0002257g0140 Nicotiana tabacum HOM05D005938 ORTHO05D007654 2.3e-115 419.5 341 64.5
Migut.D01830 Erythranthe guttata HOM05D005938 ORTHO05D007654 1.1e-114 417.2 311 67.2
COL.COLO4_24542 Corchorus olitorius HOM05D005938 ORTHO05D007654 3.3e-114 415.6 272 76.1
MELO3C017167.2 Cucumis melo HOM05D005938 ORTHO05D007654 3.3e-114 415.6 305 70.2
HanXRQChr05g0158101 Helianthus annuus HOM05D005938 ORTHO05D007654 4.4e-114 415.2 311 67.5
Nn3g17204 Nelumbo nucifera HOM05D005938 ORTHO05D007654 5.7e-114 414.8 311 66.9
TWI15G1099 Tripterygium wilfordii HOM05D005938 ORTHO05D007654 9.7e-114 414.1 263 77.6
Ah.02g113360 Amaranthus hybridus HOM05D005938 ORTHO05D007654 1.3e-113 413.7 271 75.6
FAN08G1160 Fragaria x ananassa HOM05D005938 ORTHO05D007654 1.3e-113 413.7 306 69.0
Duzib205G1012 Durio zibethinus HOM05D005938 ORTHO05D007654 1.7e-113 413.3 314 69.7
Cfa018959 Carpinus fangiana HOM05D005938 ORTHO05D007654 3.7e-113 412.1 268 78.4
ECA246G4427 Erigeron canadensis HOM05D005938 ORTHO05D007654 8.2e-113 411.0 312 65.7
FvH4_5g15170 Fragaria vesca HOM05D005938 ORTHO05D007654 2.4e-112 409.5 305 68.9
Hund09357 Selenicereus undatus HOM05D005938 ORTHO05D007654 2.4e-112 409.5 301 69.8
MD06G1191700 Malus domestica HOM05D005938 ORTHO05D007654 3.1e-112 409.1 307 70.0
MD14G1198100 Malus domestica HOM05D005938 ORTHO05D007654 7.0e-112 407.9 306 68.0
Eucgr.A02632 Eucalyptus grandis HOM05D005938 ORTHO05D007654 9.1e-112 407.5 301 70.1
Thecc.03G084300 Theobroma cacao HOM05D005938 ORTHO05D007654 9.1e-112 407.5 308 69.5
EL10Ac5g10981 Beta vulgaris HOM05D005938 ORTHO05D007654 4.5e-111 405.2 271 73.8
AL2G34410 Arabidopsis lyrata HOM05D005938 ORTHO05D007654 5.9e-111 404.8 310 67.1
arahy.Tifrunner.gnm1.ann1.KGI6NM Arachis hypogaea HOM05D005938 ORTHO05D007654 1.0e-110 404.1 316 65.8
arahy.Tifrunner.gnm1.ann1.VVHC1U Arachis hypogaea HOM05D005938 ORTHO05D007654 1.7e-110 403.3 312 66.0
RcHm_v2.0_Chr7g0181011 Rosa chinensis HOM05D005938 ORTHO05D007654 2.9e-110 402.5 303 67.7
Lsat_1_v5_gn_5_19401 Lactuca sativa HOM05D005938 ORTHO05D007654 6.5e-110 401.4 307 66.8
Dinv38693 Davidia involucrata HOM05D005938 ORTHO05D007654 8.5e-110 401.0 250 80.4
DCAR_021525 Daucus carota HOM05D005938 ORTHO05D007654 1.1e-109 400.6 295 70.8
FAN13G2109 Fragaria x ananassa HOM05D005938 ORTHO05D007654 1.1e-109 400.6 299 69.2
Potri.018G047400 Populus trichocarpa HOM05D005938 ORTHO05D007654 1.5e-109 400.2 278 73.7
PSO063G3647 Papaver somniferum HOM05D005938 ORTHO05D007654 1.9e-109 399.8 315 67.0
FAN18G0122 Fragaria x ananassa HOM05D005938 ORTHO05D007654 2.5e-109 399.4 299 68.9
SalBow7G2600 Salvia bowleyana HOM05D005938 ORTHO05D007654 7.2e-109 397.9 318 61.9
CARHR067810 Cardamine hirsuta HOM05D005938 ORTHO05D007654 1.6e-108 396.7 309 66.0
AUR62021711 Chenopodium quinoa HOM05D005938 ORTHO05D007654 1.6e-108 396.7 263 76.0
Sabra18G0045600 Salix brachista HOM05D005938 ORTHO05D007654 1.6e-108 396.7 301 68.1
AUR62008387 Chenopodium quinoa HOM05D005938 ORTHO05D007654 3.6e-108 395.6 263 76.0
Sp5g29710 Schrenkiella parvula HOM05D005938 ORTHO05D007654 4.7e-108 395.2 314 65.6
Gorai.008G192300 Gossypium raimondii HOM05D005938 ORTHO05D007654 6.1e-108 394.8 302 67.9
FAN04G0099 Fragaria x ananassa HOM05D005938 ORTHO05D007654 6.7e-107 391.3 289 70.6
ClCG06G016260 Citrullus lanatus HOM05D005938 ORTHO05D007654 1.2e-106 390.6 308 67.2
A07p40340 Brassica napus HOM05D005938 ORTHO05D007654 3.3e-106 389.0 305 66.6
Oeu016169.1 Olea europaea HOM05D005938 ORTHO05D007654 9.7e-106 387.5 264 73.9
Sopen03g035260 Solanum pennellii HOM05D005938 ORTHO05D007654 9.7e-106 387.5 253 75.5
Carub.0002s2133 Capsella rubella HOM05D005938 ORTHO05D007654 2.2e-105 386.3 310 65.5
Cpa.g.c30141.1 Carica papaya HOM05D005938 ORTHO05D007654 3.7e-105 385.6 263 74.1
Thhalv10018904m.g Eutrema salsugineum HOM05D005938 ORTHO05D007654 3.7e-105 385.6 307 65.8
Atru.BG.195.p Acer truncatum HOM05D005938 ORTHO05D007654 8.2e-105 384.4 254 76.8
BcaC08g46886 Brassica carinata HOM05D005938 ORTHO05D007654 8.2e-105 384.4 311 65.6
Manes.06G094000 Manihot esculenta HOM05D005938 ORTHO05D007654 4.1e-104 382.1 317 64.0
BcaC08g46988 Brassica carinata HOM05D005938 ORTHO05D007654 3.5e-103 379.0 304 65.1
Psat5g187160 Pisum sativum HOM05D005938 ORTHO05D007654 1.0e-102 377.5 274 70.4
BraA07t31575Z Brassica rapa HOM05D005938 ORTHO05D007654 1.1e-101 374.0 328 61.6
THA.LOC104812546 Tarenaya hassleriana HOM05D005938 ORTHO05D007654 1.2e-98 364.0 306 62.4
unitig_744.g24387 Utricularia gibba HOM05D005938 ORTHO05D007654 1.7e-97 360.1 309 59.5
Aa31LG7G3570 Aethionema arabicum HOM05D005938 ORTHO05D007654 3.7e-97 359.0 303 61.4
Aqoxy3G03351 Aquilegia oxysepala HOM05D005938 ORTHO05D007654 4.8e-97 358.6 296 64.9
SEGI_36934 Sequoiadendron giganteum HOM05D005938 ORTHO05D007654 2.4e-96 356.3 316 57.9
SGA_v2.0_scaffold114G31898 Striga asiatica HOM05D005938 ORTHO05D007654 3.1e-96 355.9 323 58.5
ATR0564G381 Amborella trichopoda HOM05D005938 ORTHO05D007654 5.0e-94 348.6 273 64.8
CDE02G0021 Ceratophyllum demersum HOM05D005938 ORTHO05D007654 3.3e-93 345.9 272 62.9
Os08g0171000 Oryza sativa ssp. japonica HOM05D005938 ORTHO05D007654 1.4e-91 340.5 264 63.3
BcaC08g46884 Brassica carinata HOM05D005938 ORTHO05D007654 1.0e-86 324.3 324 56.8
SHI04241 Sapria himalayana HOM05D005938 ORTHO05D007654 2.9e-86 322.8 338 53.8
C06p48680 Brassica napus HOM05D005938 ORTHO05D007654 1.5e-85 320.5 256 65.6
CSS0050188 Camellia sinensis var. sinensis HOM05D005938 ORTHO05D007654 5.6e-85 318.5 204 81.9
Haze_07341 Corylus avellana HOM05D005938 ORTHO05D007654 4.7e-84 315.5 373 53.1
Aa31LG4G4790 Aethionema arabicum HOM05D005938 ORTHO05D007654 1.0e-83 314.3 238 66.8
BolC6t39901H Brassica oleracea HOM05D005938 ORTHO05D007654 1.3e-81 307.4 263 63.9
Mapoly0002s0073 Marchantia polymorpha HOM05D005938 ORTHO05D007654 1.7e-78 297.0 260 58.1
AT1G74530 Arabidopsis thaliana HOM05D005938 ORTHO05D007654 2.3e-78 296.6 253 63.2
Medtr0036s0320 Medicago truncatula HOM05D005938 ORTHO05D007654 1.1e-75 287.7 190 73.7
Hma1.2p1_0735F.1_g210490 Hydrangea macrophylla HOM05D005938 ORTHO05D007654 1.9e-69 266.9 165 80.0
Pp3c17_15280 Physcomitrium patens HOM05D005938 ORTHO05D007654 1.7e-65 253.8 315 47.6
VMungo1309G2195 Vigna mungo HOM05D005938 ORTHO05D007654 2.2e-65 253.4 176 71.0
SMO270G0117 Selaginella moellendorffii HOM05D005938 ORTHO05D007654 2.4e-64 250.0 263 50.6
MBI02_g23681_MAGBIO Magnolia biondii HOM05D005938 ORTHO05D007654 8.6e-62 241.5 164 75.0
AagrBONN_evm.TU.Sc2ySwM_117.1670 Anthoceros agrestis HOM05D005938 ORTHO05D007654 1.2e-60 237.7 259 49.0
FAN10G3346 Fragaria x ananassa HOM05D005938 ORTHO05D007654 4.4e-58 229.2 153 75.2
CBR_g66809 Chara braunii HOM05D005938 ORTHO05D007654 8.4e-57 224.9 272 43.8
Glyma.04G170700 Glycine max HOM05D005938 ORTHO05D007654 2.7e-55 219.9 158 69.6
Zm00001eb415000 Zea mays HOM05D005938 ORTHO05D007654 4.0e-51 206.1 210 56.7
arahy.Tifrunner.gnm1.ann1.518D86 Arachis hypogaea HOM05D005938 ORTHO05D007654 5.1e-38 162.5 144 59.0
FAN18G0131 Fragaria x ananassa HOM05D005938 ORTHO05D007654 4.0e-35 152.9 162 56.2
CSS0038577 Camellia sinensis var. sinensis HOM05D005938 ORTHO05D007654 9.0e-35 151.8 84 86.9
MBI15_g27838_MAGBIO Magnolia biondii HOM05D005938 ORTHO05D007654 4.5e-34 149.4 172 52.9
MCO16G029 Micromonas commoda HOM05D005938 ORTHO05D007654 1.0e-33 148.3 277 33.9
Medtr3g040450 Medicago truncatula HOM05D005938 ORTHO05D007654 4.9e-33 146.0 118 64.4
QL07p001114 Quercus lobata HOM05D005938 ORTHO05D007654 1.9e-32 144.1 169 50.9
VMungo0019G0001 Vigna mungo HOM05D005938 ORTHO05D007654 1.3e-30 137.9 114 64.0
FAN01G1759 Fragaria x ananassa HOM05D005938 ORTHO05D007654 2.0e-26 124.0 98 65.3
MD17G1094500 Malus domestica HOM05D005938 ORTHO05D007654 1.4e-24 117.9 79 72.2
Prupe.5G190800 Prunus persica HOM05D005938 ORTHO05D007654 4.2e-24 116.3 85 65.9
Cre12.g513300 Chlamydomonas reinhardtii HOM05D005938 ORTHO05D007654 1.2e-23 114.8 208 36.1
PRCOL_00003564 Prasinoderma coloniale HOM05D005938 ORTHO05D007654 2.5e-21 107.1 278 32.4
QL02p071402 Quercus lobata HOM05D005938 ORTHO05D028155 5.7e-21 105.9 66 75.8
QL12p034017 Quercus lobata HOM05D000176 ORTHO05D000106 1.6e-20 104.4 68 72.1
Thhalv10000377m.g Eutrema salsugineum HOM05D005938 ORTHO05D007654 3.6e-07 60.1 91 39.6


User provided reference genes

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