Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0017264 Camellia sinensis var. sinensis HOM05D002115 ORTHO05D002263 6.2e-131 470.7 222 100.0
CSS0045142 Camellia sinensis var. sinensis HOM05D002115 ORTHO05D002263 4.6e-118 427.9 204 100.0
Lj8A139T62 Lonicera japonica HOM05D002115 ORTHO05D002263 6.0e-41 171.8 87 90.8
CSS0007528 Camellia sinensis var. sinensis HOM05D002115 ORTHO05D002263 1.0e-40 171.0 87 89.7
CSS0039958 Camellia sinensis var. sinensis HOM05D002115 ORTHO05D002263 1.0e-40 171.0 87 89.7
Actinidia35188 Actinidia chinensis HOM05D002115 ORTHO05D002263 1.9e-39 166.8 114 71.9
Cc05_g09970 Coffea canephora HOM05D002115 ORTHO05D002263 2.1e-38 163.3 86 87.2
Nitab4.5_0004166g0030 Nicotiana tabacum HOM05D002115 ORTHO05D002263 2.1e-38 163.3 86 87.2
Rhsim04G0032200 Rhododendron simsii HOM05D002115 ORTHO05D002263 2.8e-38 162.9 88 85.2
Actinidia18815 Actinidia chinensis HOM05D002115 ORTHO05D002263 3.6e-38 162.5 87 85.1
Solyc07g056030.3 Solanum lycopersicum HOM05D002115 ORTHO05D002263 3.6e-38 162.5 86 87.2
Sopen07g029380 Solanum pennellii HOM05D002115 ORTHO05D002263 3.6e-38 162.5 86 87.2
PGSC0003DMG400031100 Solanum tuberosum HOM05D002115 ORTHO05D002263 6.2e-38 161.8 86 86.0
CAN.G585.4 Capsicum annuum HOM05D002115 ORTHO05D002263 8.1e-38 161.4 86 86.0
Peaxi162Scf00111g00532 Petunia axillaris HOM05D002115 ORTHO05D002263 8.1e-38 161.4 86 86.0
TAR627G0134 Trochodendron aralioides HOM05D002115 ORTHO05D002263 1.1e-37 161.0 88 87.5
Dinv21343 Davidia involucrata HOM05D002115 ORTHO05D002263 4.0e-37 159.1 85 88.2
Nn3g20355 Nelumbo nucifera HOM05D002115 ORTHO05D002263 4.4e-36 155.6 87 82.8
Migut.H02057 Erythranthe guttata HOM05D002115 ORTHO05D002263 1.3e-35 154.1 86 83.7
SGA_v2.0_scaffold130G34243 Striga asiatica HOM05D002115 ORTHO05D002263 2.2e-35 153.3 141 56.7
TAR629G1494 Trochodendron aralioides HOM05D002115 ORTHO05D002263 8.3e-35 151.4 87 82.8
PSO541G2268 Papaver somniferum HOM05D002115 ORTHO05D002263 1.1e-34 151.0 97 75.3
PSO675G7753 Papaver somniferum HOM05D002115 ORTHO05D002263 1.1e-34 151.0 97 75.3
Manes.17G074000 Manihot esculenta HOM05D002115 ORTHO05D002263 1.4e-34 150.6 93 79.6
Duzib160G0249 Durio zibethinus HOM05D002115 ORTHO05D002263 3.2e-34 149.4 87 82.8
Duzib235G1503 Durio zibethinus HOM05D002115 ORTHO05D002263 3.2e-34 149.4 87 80.5
Atru.chr10.1123 Acer truncatum HOM05D002115 ORTHO05D002263 5.4e-34 148.7 87 81.6
Gorai.010G168200 Gossypium raimondii HOM05D002115 ORTHO05D002263 7.1e-34 148.3 89 80.9
Gohir.D06G144500 Gossypium hirsutum HOM05D002115 ORTHO05D002263 1.2e-33 147.5 89 80.9
Thecc.06G145100 Theobroma cacao HOM05D002115 ORTHO05D002263 1.6e-33 147.1 87 80.5
Ciclev10014165m.g Citrus clementina HOM05D002115 ORTHO05D002263 2.1e-33 146.7 87 79.3
GSVIVG01021543001 Vitis vinifera HOM05D002115 ORTHO05D002263 2.1e-33 146.7 87 80.5
Duzib192G0494 Durio zibethinus HOM05D002115 ORTHO05D002263 6.0e-33 145.2 87 78.2
Oeu012707.1 Olea europaea HOM05D002115 ORTHO05D002263 1.0e-32 144.4 86 77.9
AUR62042840 Chenopodium quinoa HOM05D002115 ORTHO05D002263 1.7e-32 143.7 87 81.6
Gohir.A06G139800 Gossypium hirsutum HOM05D002115 ORTHO05D002263 1.7e-32 143.7 89 79.8
Sc07g0003090 Simmondsia chinensis HOM05D002115 ORTHO05D002263 1.7e-32 143.7 86 82.6
Aqoxy4G00083 Aquilegia oxysepala HOM05D002115 ORTHO05D002263 2.3e-32 143.3 87 79.3
Hund10312 Selenicereus undatus HOM05D002115 ORTHO05D002263 3.9e-32 142.5 85 80.0
Haze_05655 Corylus avellana HOM05D002115 ORTHO05D002263 5.1e-32 142.1 95 71.6
Manes.15G124650 Manihot esculenta HOM05D002115 ORTHO05D002263 5.1e-32 142.1 87 78.2
PGR031G3691 Punica granatum HOM05D002115 ORTHO05D002263 6.6e-32 141.7 93 74.2
Potri.011G081200 Populus trichocarpa HOM05D002115 ORTHO05D002263 8.6e-32 141.4 87 78.2
Eucgr.F03190 Eucalyptus grandis HOM05D002115 ORTHO05D002263 1.1e-31 141.0 87 79.3
AUR62041253 Chenopodium quinoa HOM05D002115 ORTHO05D002263 1.5e-31 140.6 86 81.4
TWI73G1220 Tripterygium wilfordii HOM05D002115 ORTHO05D002263 2.5e-31 139.8 87 79.3
ECA236G4492 Erigeron canadensis HOM05D002115 ORTHO05D002263 3.3e-31 139.4 87 75.9
Ah.06g187380 Amaranthus hybridus HOM05D002115 ORTHO05D002263 4.3e-31 139.0 86 77.9
Gohir.A10G043600 Gossypium hirsutum HOM05D002115 ORTHO05D002263 9.5e-31 137.9 87 77.0
HanXRQChr09g0257501 Helianthus annuus HOM05D002115 ORTHO05D002263 9.5e-31 137.9 85 76.5
MBI18_g11225_MAGBIO Magnolia biondii HOM05D002115 ORTHO05D002263 9.5e-31 137.9 88 80.7
SGA_v2.0_scaffold4G02144 Striga asiatica HOM05D002115 ORTHO05D002263 1.6e-30 137.1 87 73.6
Sabra11G0064700 Salix brachista HOM05D002115 ORTHO05D002263 2.1e-30 136.7 86 79.1
unitig_52.g17392 Utricularia gibba HOM05D002115 ORTHO05D002263 2.1e-30 136.7 86 74.4
Gohir.D10G044800 Gossypium hirsutum HOM05D002115 ORTHO05D002263 2.8e-30 136.3 87 74.7
Gorai.011G047800 Gossypium raimondii HOM05D002115 ORTHO05D002263 2.8e-30 136.3 87 74.7
RcHm_v2.0_Chr5g0014771 Rosa chinensis HOM05D002115 ORTHO05D002263 2.8e-30 136.3 87 75.9
FvH4_3g05100 Fragaria vesca HOM05D002115 ORTHO05D002263 3.6e-30 136.0 87 75.9
DCAR_013808 Daucus carota HOM05D002115 ORTHO05D002263 4.7e-30 135.6 86 73.3
TWI09G0160 Tripterygium wilfordii HOM05D002115 ORTHO05D002263 4.7e-30 135.6 86 77.9
Cpa.g.sc229.1 Carica papaya HOM05D002115 ORTHO05D002263 6.2e-30 135.2 93 71.0
HanXRQChr11g0330041 Helianthus annuus HOM05D002115 ORTHO05D002263 6.2e-30 135.2 90 74.4
EL10Ac4g08514 Beta vulgaris HOM05D002115 ORTHO05D002263 1.1e-29 134.4 86 79.1
FAN16G0539 Fragaria x ananassa HOM05D002115 ORTHO05D002263 1.1e-29 134.4 87 75.9
FAN16G1035 Fragaria x ananassa HOM05D002115 ORTHO05D002263 1.1e-29 134.4 87 75.9
Lalb_Chr07g0187511 Lupinus albus HOM05D002115 ORTHO05D002263 1.4e-29 134.0 87 74.7
CiPaw.10G089000 Carya illinoinensis HOM05D002115 ORTHO05D002263 1.8e-29 133.7 86 74.4
ECA240G2296 Erigeron canadensis HOM05D002115 ORTHO05D002263 1.8e-29 133.7 87 72.4
QL05p055199 Quercus lobata HOM05D002115 ORTHO05D002263 1.8e-29 133.7 86 76.7
Dinv30692 Davidia involucrata HOM05D002115 ORTHO05D002263 3.1e-29 132.9 77 81.8
MD10G1258600 Malus domestica HOM05D002115 ORTHO05D002263 3.1e-29 132.9 87 75.9
TWI53G2036 Tripterygium wilfordii HOM05D002115 ORTHO05D002263 3.1e-29 132.9 85 77.6
CANSAT35G1551 Cannabis sativa HOM05D002115 ORTHO05D002263 5.2e-29 132.1 85 77.6
FAN21G3828 Fragaria x ananassa HOM05D002115 ORTHO05D002263 5.2e-29 132.1 87 73.6
arahy.Tifrunner.gnm1.ann1.2Y4SM6 Arachis hypogaea HOM05D002115 ORTHO05D002263 6.8e-29 131.7 97 68.0
MSTRG.14265 Avicennia marina HOM05D002115 ORTHO05D002263 6.8e-29 131.7 86 70.9
Lsat_1_v5_gn_9_103361 Lactuca sativa HOM05D002115 ORTHO05D002263 6.8e-29 131.7 87 73.6
arahy.Tifrunner.gnm1.ann1.X0DSCJ Arachis hypogaea HOM05D002115 ORTHO05D002263 1.2e-28 131.0 87 72.4
DCAR_019646 Daucus carota HOM05D002115 ORTHO05D002263 1.2e-28 131.0 84 75.0
MD05G1280300 Malus domestica HOM05D002115 ORTHO05D002263 1.5e-28 130.6 86 75.6
Lalb_Chr13g0294001 Lupinus albus HOM05D002115 ORTHO05D002263 2.0e-28 130.2 88 72.7
Lj4g0017001 Lotus japonicus HOM05D002115 ORTHO05D002263 4.4e-28 129.0 87 71.3
arahy.Tifrunner.gnm1.ann1.949BMZ Arachis hypogaea HOM05D002115 ORTHO05D002263 7.6e-28 128.3 97 67.0
Prupe.4G085100 Prunus persica HOM05D002115 ORTHO05D002263 7.6e-28 128.3 87 72.4
FAN11G3721 Fragaria x ananassa HOM05D002115 ORTHO05D002263 1.3e-27 127.5 82 76.8
CiPaw.09G120200 Carya illinoinensis HOM05D002115 ORTHO05D002263 1.1e-26 124.4 86 72.1
SalBow7G3109 Salvia bowleyana HOM05D002115 ORTHO05D002263 1.1e-26 124.4 87 69.0
SalBow7G3339 Salvia bowleyana HOM05D002115 ORTHO05D002263 1.1e-26 124.4 87 69.0
Glyma.05G143100 Glycine max HOM05D002115 ORTHO05D002263 1.9e-26 123.6 127 58.3
ATR1098G055 Amborella trichopoda HOM05D002115 ORTHO05D002263 2.4e-26 123.2 87 73.6
TPR.G9578 Trifolium pratense HOM05D002115 ORTHO05D002263 4.1e-26 122.5 88 73.9
Lsat_1_v5_gn_7_99441 Lactuca sativa HOM05D002115 ORTHO05D002263 5.4e-26 122.1 88 70.5
AL1G29450 Arabidopsis lyrata HOM05D002115 ORTHO05D002263 9.2e-26 121.3 87 74.7
Carub.0001s1696 Capsella rubella HOM05D002115 ORTHO05D002263 1.2e-25 120.9 86 72.1
MELO3C002767.2 Cucumis melo HOM05D002115 ORTHO05D002263 1.2e-25 120.9 95 70.5
CsaV3_1G036830 Cucumis sativus L. HOM05D002115 ORTHO05D002263 1.2e-25 120.9 95 70.5
Sed0015162 Sechium edule HOM05D002115 ORTHO05D002263 1.6e-25 120.6 95 69.5
Ca_18162_v3 Cicer arietinum L. HOM05D002115 ORTHO05D002263 2.1e-25 120.2 88 70.5
A08p31040 Brassica napus HOM05D002115 ORTHO05D002263 2.7e-25 119.8 107 61.7
Glyma.08G099500 Glycine max HOM05D002115 ORTHO05D002263 3.5e-25 119.4 87 73.6
BraA08t35033Z Brassica rapa HOM05D002115 ORTHO05D002263 4.6e-25 119.0 86 70.9
THA.LOC104808073 Tarenaya hassleriana HOM05D002115 ORTHO05D002263 4.6e-25 119.0 87 70.1
BcaB07g34041 Brassica carinata HOM05D002115 ORTHO05D002263 6.0e-25 118.6 86 70.9
BcaC05g25656 Brassica carinata HOM05D002115 ORTHO05D002263 6.0e-25 118.6 86 70.9
C05p15630 Brassica napus HOM05D002115 ORTHO05D002263 6.0e-25 118.6 86 70.9
BolC5t30270H Brassica oleracea HOM05D002115 ORTHO05D002263 6.0e-25 118.6 86 70.9
CARHR017790 Cardamine hirsuta HOM05D002115 ORTHO05D002263 6.0e-25 118.6 86 69.8
A06p13130 Brassica napus HOM05D002115 ORTHO05D002263 1.0e-24 117.9 86 69.8
BraA06t24471Z Brassica rapa HOM05D002115 ORTHO05D002263 1.0e-24 117.9 86 69.8
BcaC07g38836 Brassica carinata HOM05D002115 ORTHO05D002263 1.3e-24 117.5 108 60.2
Psat7g134600 Pisum sativum HOM05D002115 ORTHO05D002263 1.7e-24 117.1 87 71.3
AT1G17210 Arabidopsis thaliana HOM05D002115 ORTHO05D002263 2.3e-24 116.7 86 69.8
SHI24853 Sapria himalayana HOM05D002115 ORTHO05D002263 3.9e-24 115.9 86 67.4
Thhalv10006705m.g Eutrema salsugineum HOM05D002115 ORTHO05D002263 5.1e-24 115.5 86 69.8
Sp1g15350 Schrenkiella parvula HOM05D002115 ORTHO05D002263 5.1e-24 115.5 86 69.8
Lj3g0017411 Lotus japonicus HOM05D002115 ORTHO05D002263 6.6e-24 115.2 79 72.2
Medtr8g079465 Medicago truncatula HOM05D002115 ORTHO05D002263 6.6e-24 115.2 88 69.3
Glyma.15G253100 Glycine max HOM05D002115 ORTHO05D002263 2.5e-23 113.2 85 65.9
Glyma.08G174100 Glycine max HOM05D002115 ORTHO05D002263 3.3e-23 112.8 79 69.6
Sed0026904 Sechium edule HOM05D002115 ORTHO05D002263 3.3e-23 112.8 96 65.6
THA.LOC104813972 Tarenaya hassleriana HOM05D002115 ORTHO05D002263 3.3e-23 112.8 86 67.4
VMungo0251G1773 Vigna mungo HOM05D002115 ORTHO05D002263 3.3e-23 112.8 87 69.0
Phvul.002G178200 Phaseolus vulgaris HOM05D002115 ORTHO05D002263 4.3e-23 112.5 87 66.7
Phvul.005G054700 Phaseolus vulgaris HOM05D002115 ORTHO05D002263 5.6e-23 112.1 81 67.9
SEGI_31461 Sequoiadendron giganteum HOM05D002115 ORTHO05D002263 5.6e-23 112.1 81 66.7
HPP92_017719 Vanilla planifolia HOM05D002115 ORTHO05D002263 7.3e-23 111.7 87 65.5
arahy.Tifrunner.gnm1.ann1.GIH6UL Arachis hypogaea HOM05D002115 ORTHO05D002263 2.1e-22 110.2 87 64.4
arahy.Tifrunner.gnm1.ann1.T6TPBC Arachis hypogaea HOM05D002115 ORTHO05D002263 2.1e-22 110.2 87 64.4
Psat1g002000 Pisum sativum HOM05D002115 ORTHO05D002263 2.1e-22 110.2 87 64.4
BcaC07g38835 Brassica carinata HOM05D002115 ORTHO05D002263 4.7e-22 109.0 104 59.6
HPP92_014003 Vanilla planifolia HOM05D002115 ORTHO05D002263 4.7e-22 109.0 81 65.4
CDE01G0776 Ceratophyllum demersum HOM05D002115 ORTHO05D002263 1.4e-21 107.5 86 67.4
VMungo1080G0789 Vigna mungo HOM05D002115 ORTHO05D002263 1.8e-21 107.1 74 71.6
ClCG03G006530 Citrullus lanatus HOM05D002115 ORTHO05D002263 2.4e-21 106.7 78 73.1
Ca_03710_v3 Cicer arietinum L. HOM05D002115 ORTHO05D002263 5.2e-21 105.5 79 64.6
TPR.G27155 Trifolium pratense HOM05D002115 ORTHO05D002263 5.2e-21 105.5 87 62.1
Zm00001eb300000 Zea mays HOM05D002115 ORTHO05D002263 1.5e-20 104.0 93 58.1
Aa31LG4G2610 Aethionema arabicum HOM05D002115 ORTHO05D002263 3.4e-20 102.8 83 67.5
Lalb_Chr25g0285231 Lupinus albus HOM05D002115 ORTHO05D002263 4.4e-20 102.4 79 64.6
Medtr2g064880 Medicago truncatula HOM05D002115 ORTHO05D002263 9.9e-20 101.3 79 65.8
Zm00001eb059900 Zea mays HOM05D002115 ORTHO05D002263 2.9e-19 99.8 87 55.2
Os07g0150500 Oryza sativa ssp. japonica HOM05D002115 ORTHO05D002263 3.5e-17 92.8 84 57.1
AagrBONN_evm.TU.Sc2ySwM_344.1038 Anthoceros agrestis HOM05D002115 ORTHO05D002263 2.3e-16 90.1 77 57.1
vmacro09450 Vaccinium macrocarpon HOM05D002115 ORTHO05D002263 6.6e-16 88.6 38 97.4
Os03g0785300 Oryza sativa ssp. japonica HOM05D002115 ORTHO05D002263 1.1e-15 87.8 87 50.6
Pp3c7_5540 Physcomitrium patens HOM05D002115 ORTHO05D002263 1.2e-09 67.8 77 48.1
SMO239G0201 Selaginella moellendorffii HOM05D002115 ORTHO05D002263 6.0e-09 65.5 72 50.0
Haze_05665 Corylus avellana HOM05D002115 ORTHO05D002263 3.0e-08 63.2 74 43.2
Mapoly0044s0042 Marchantia polymorpha HOM05D002115 ORTHO05D002263 3.0e-08 63.2 81 45.7
SEGI_20870 Sequoiadendron giganteum HOM05D002115 ORTHO05D002263 1.3e-06 57.8 86 39.5


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