Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0017238 Camellia sinensis var. sinensis HOM05D005409 ORTHO05D006456 6.4e-283 976.9 531 100.0
Dinv18952 Davidia involucrata HOM05D005409 ORTHO05D006456 8.7e-147 524.6 661 51.9
Actinidia11830 Actinidia chinensis HOM05D005409 ORTHO05D006456 1.2e-143 514.2 652 51.2
Hma1.2p1_0809F.1_g221770 Hydrangea macrophylla HOM05D005409 ORTHO05D006456 1.4e-133 480.7 635 52.8
Cfa016400 Carpinus fangiana HOM05D005409 ORTHO05D006456 9.0e-128 461.5 625 48.2
Prupe.4G030000 Prunus persica HOM05D005409 ORTHO05D006456 1.9e-125 453.8 633 46.9
Lj2A276T57 Lonicera japonica HOM05D005409 ORTHO05D006456 7.1e-125 451.8 627 48.6
Rhsim02G0115600 Rhododendron simsii HOM05D005409 ORTHO05D006456 1.8e-120 437.2 696 45.4
TAR624G1144 Trochodendron aralioides HOM05D005409 ORTHO05D006456 1.5e-119 434.1 638 47.0
vmacro15844 Vaccinium macrocarpon HOM05D005409 ORTHO05D006456 5.9e-119 432.2 661 46.0
Lj1A1221T57 Lonicera japonica HOM05D005409 ORTHO05D006456 7.6e-119 431.8 595 48.6
Nitab4.5_0006456g0010 Nicotiana tabacum HOM05D005409 ORTHO05D006456 1.7e-118 430.6 649 45.3
Cc02_g11840 Coffea canephora HOM05D005409 ORTHO05D006456 1.9e-117 427.2 651 47.2
Nitab4.5_0000503g0080 Nicotiana tabacum HOM05D005409 ORTHO05D006456 2.7e-116 423.3 649 44.4
MD05G1335400 Malus domestica HOM05D005409 ORTHO05D006456 2.3e-115 420.2 623 45.7
Nn1g06923 Nelumbo nucifera HOM05D005409 ORTHO05D006456 4.3e-114 416.0 638 45.5
Solyc02g079880.3 Solanum lycopersicum HOM05D005409 ORTHO05D006456 4.3e-114 416.0 646 44.4
TAR626G0140 Trochodendron aralioides HOM05D005409 ORTHO05D006456 2.2e-113 413.7 637 47.1
Sopen02g024640 Solanum pennellii HOM05D005409 ORTHO05D006456 2.8e-113 413.3 652 44.2
PGSC0003DMG400021722 Solanum tuberosum HOM05D005409 ORTHO05D006456 6.3e-113 412.1 644 44.1
Duzib192G0995 Durio zibethinus HOM05D005409 ORTHO05D006456 5.3e-112 409.1 632 44.1
MD10G1310800 Malus domestica HOM05D005409 ORTHO05D006456 6.9e-112 408.7 630 43.8
Peaxi162Scf00759g00211 Petunia axillaris HOM05D005409 ORTHO05D006456 7.7e-111 405.2 647 44.2
Gohir.D10G017400 Gossypium hirsutum HOM05D005409 ORTHO05D006456 1.3e-110 404.4 623 44.8
Gorai.011G019300 Gossypium raimondii HOM05D005409 ORTHO05D006456 1.3e-110 404.4 623 44.8
Thecc.06G207400 Theobroma cacao HOM05D005409 ORTHO05D006456 2.2e-110 403.7 630 45.1
MELO3C002515.2 Cucumis melo HOM05D005409 ORTHO05D006456 2.9e-110 403.3 630 44.6
CsaV3_1G011380 Cucumis sativus L. HOM05D005409 ORTHO05D006456 6.5e-110 402.1 631 43.6
Phvul.002G218900 Phaseolus vulgaris HOM05D005409 ORTHO05D006456 2.1e-108 397.1 638 43.4
ECA236G3644 Erigeron canadensis HOM05D005409 ORTHO05D006456 2.7e-108 396.7 608 45.4
Glyma.08G061800 Glycine max HOM05D005409 ORTHO05D006456 2.7e-108 396.7 634 43.4
Hma1.2p1_0809F.1_g221760 Hydrangea macrophylla HOM05D005409 ORTHO05D006456 3.6e-108 396.4 507 51.7
CiPaw.10G113200 Carya illinoinensis HOM05D005409 ORTHO05D006456 4.6e-108 396.0 638 43.6
COL.COLO4_33645 Corchorus olitorius HOM05D005409 ORTHO05D006456 4.6e-108 396.0 630 47.3
Gohir.A10G017200 Gossypium hirsutum HOM05D005409 ORTHO05D006456 2.3e-107 393.7 622 43.7
ClCG03G005190 Citrullus lanatus HOM05D005409 ORTHO05D006456 8.8e-107 391.7 629 43.4
FAN25G1204 Fragaria x ananassa HOM05D005409 ORTHO05D006456 8.8e-107 391.7 665 42.4
Duzib235G0390 Durio zibethinus HOM05D005409 ORTHO05D006456 2.6e-106 390.2 639 43.7
Glyma.07G187300 Glycine max HOM05D005409 ORTHO05D006456 3.3e-106 389.8 634 42.6
Actinidia24044 Actinidia chinensis HOM05D005409 ORTHO05D006456 4.8e-105 386.0 499 52.1
Hund23539 Selenicereus undatus HOM05D005409 ORTHO05D006456 6.3e-105 385.6 638 44.2
Sc17g0006920 Simmondsia chinensis HOM05D005409 ORTHO05D006456 4.1e-104 382.9 616 43.3
Manes.17G030300 Manihot esculenta HOM05D005409 ORTHO05D006456 1.2e-103 381.3 631 42.9
CiPaw.10G113100 Carya illinoinensis HOM05D005409 ORTHO05D006456 2.6e-103 380.2 636 45.3
Gorai.006G084700 Gossypium raimondii HOM05D005409 ORTHO05D006456 5.9e-103 379.0 645 42.8
Gohir.D09G070300 Gossypium hirsutum HOM05D005409 ORTHO05D006456 1.0e-102 378.3 638 43.1
VMungo0251G1750 Vigna mungo HOM05D005409 ORTHO05D006456 1.0e-102 378.3 649 42.2
Gohir.A09G070200 Gossypium hirsutum HOM05D005409 ORTHO05D006456 1.3e-102 377.9 636 42.9
Sed0006411 Sechium edule HOM05D005409 ORTHO05D006456 3.8e-102 376.3 623 42.4
Ciclev10014614m.g Citrus clementina HOM05D005409 ORTHO05D006456 8.5e-102 375.2 626 42.2
MSTRG.15953 Avicennia marina HOM05D005409 ORTHO05D006456 2.5e-101 373.6 650 42.5
Actinidia26959 Actinidia chinensis HOM05D005409 ORTHO05D006456 4.2e-101 372.9 425 53.4
HanXRQChr15g0482781 Helianthus annuus HOM05D005409 ORTHO05D006456 5.5e-101 372.5 610 44.6
Oeu016146.1 Olea europaea HOM05D005409 ORTHO05D006456 9.4e-101 371.7 646 41.5
HanXRQChr15g0482771 Helianthus annuus HOM05D005409 ORTHO05D006456 2.1e-100 370.5 610 45.1
TWI63G1109 Tripterygium wilfordii HOM05D005409 ORTHO05D006456 3.0e-99 366.7 646 41.6
Ca_18454_v3 Cicer arietinum L. HOM05D005409 ORTHO05D006456 6.7e-99 365.5 636 41.2
Lalb_Chr09g0327161 Lupinus albus HOM05D005409 ORTHO05D006456 7.4e-98 362.1 632 41.5
Lj4g0002185 Lotus japonicus HOM05D005409 ORTHO05D006456 9.7e-98 361.7 644 41.1
CANSAT35G0463 Cannabis sativa HOM05D005409 ORTHO05D006456 1.7e-97 360.9 634 40.9
QL05p077347 Quercus lobata HOM05D005409 ORTHO05D006456 1.7e-97 360.9 681 42.7
Lsat_1_v5_gn_7_18380 Lactuca sativa HOM05D005409 ORTHO05D006456 8.2e-97 358.6 589 45.3
DCAR_008109 Daucus carota HOM05D005409 ORTHO05D006456 1.8e-96 357.5 614 42.7
GSVIVG01006401001 Vitis vinifera HOM05D005409 ORTHO05D006456 4.5e-95 352.8 602 42.7
Medtr4g092050 Medicago truncatula HOM05D005409 ORTHO05D006456 1.0e-94 351.7 626 40.6
AUR62012574 Chenopodium quinoa HOM05D005409 ORTHO05D006456 8.5e-94 348.6 642 43.0
Actinidia26760 Actinidia chinensis HOM05D005409 ORTHO05D006456 1.1e-93 348.2 532 45.1
Psat0s935g0040 Pisum sativum HOM05D005409 ORTHO05D006456 4.2e-93 346.3 634 41.5
TPR.G13934 Trifolium pratense HOM05D005409 ORTHO05D006456 2.7e-92 343.6 632 41.5
Haze_06671 Corylus avellana HOM05D005409 ORTHO05D006456 2.6e-90 337.0 433 49.9
AUR62014626 Chenopodium quinoa HOM05D005409 ORTHO05D006456 5.7e-90 335.9 649 41.6
Lalb_Chr16g0383301 Lupinus albus HOM05D005409 ORTHO05D006456 1.7e-89 334.3 633 39.7
EL10As6g23684 Beta vulgaris HOM05D005409 ORTHO05D006456 1.4e-88 331.3 643 42.0
MBI02_g26225_MAGBIO Magnolia biondii HOM05D005409 ORTHO05D006456 1.4e-88 331.3 617 43.1
SGA_v2.0_scaffold7G03896 Striga asiatica HOM05D005409 ORTHO05D006456 3.1e-88 330.1 638 38.6
Aqoxy1G03830 Aquilegia oxysepala HOM05D005409 ORTHO05D006456 4.1e-88 329.7 681 38.9
Migut.M01258 Erythranthe guttata HOM05D005409 ORTHO05D006456 4.1e-88 329.7 616 42.2
PSO541G2946 Papaver somniferum HOM05D005409 ORTHO05D006456 8.5e-86 322.0 626 43.9
PSO675G2591 Papaver somniferum HOM05D005409 ORTHO05D006456 8.5e-86 322.0 626 43.6
Oeu050809.4 Olea europaea HOM05D005409 ORTHO05D006456 1.1e-85 321.6 647 39.3
Eucgr.E03596 Eucalyptus grandis HOM05D005409 ORTHO05D006456 1.2e-84 318.2 508 42.1
DCAR_004174 Daucus carota HOM05D005409 ORTHO05D006456 6.1e-84 315.8 603 40.8
Potri.011G031900 Populus trichocarpa HOM05D005409 ORTHO05D006456 6.8e-83 312.4 627 43.1
FvH4_3g03030 Fragaria vesca HOM05D005409 ORTHO05D006456 1.3e-78 298.1 472 43.0
PGR042G2399 Punica granatum HOM05D005409 ORTHO05D006456 5.0e-78 296.2 629 39.0
Ah.14g088510 Amaranthus hybridus HOM05D005409 ORTHO05D006456 9.5e-77 292.0 640 37.7
SalBow8G4343 Salvia bowleyana HOM05D005409 ORTHO05D006456 3.6e-76 290.0 455 44.8
Cpa.g.sc81.2 Carica papaya HOM05D005409 ORTHO05D006456 8.0e-76 288.9 433 45.0
Sabra11G0025100 Salix brachista HOM05D005409 ORTHO05D006456 8.0e-76 288.9 600 40.8
GSVIVG01030650001 Vitis vinifera HOM05D005409 ORTHO05D006456 2.3e-75 287.3 612 37.6
THA.LOC104809524 Tarenaya hassleriana HOM05D005409 ORTHO05D006456 9.8e-74 282.0 607 38.7
Oeu050499.1 Olea europaea HOM05D005409 ORTHO05D006456 2.4e-72 277.3 427 44.0
Sabra11G0019200 Salix brachista HOM05D005409 ORTHO05D006456 4.3e-69 266.5 596 39.3
CDE12G0800 Ceratophyllum demersum HOM05D005409 ORTHO05D006456 1.0e-67 261.9 445 42.0
TWI38G0167 Tripterygium wilfordii HOM05D005409 ORTHO05D006456 1.4e-67 261.5 593 40.5
Aa31LG1G3270 Aethionema arabicum HOM05D005409 ORTHO05D006456 1.8e-67 261.2 595 38.0
arahy.Tifrunner.gnm1.ann1.XK38U2 Arachis hypogaea HOM05D005409 ORTHO05D006456 1.5e-66 258.1 604 37.6
Potri.017G041300 Populus trichocarpa HOM05D005409 ORTHO05D006456 7.5e-66 255.8 605 40.5
Sp1g10100 Schrenkiella parvula HOM05D005409 ORTHO05D006456 4.9e-65 253.1 595 37.3
AT1G11480 Arabidopsis thaliana HOM05D005409 ORTHO05D006456 1.5e-61 241.5 614 36.2
THA.LOC104818924 Tarenaya hassleriana HOM05D005409 ORTHO05D006456 2.5e-61 240.7 574 37.8
CARHR011750 Cardamine hirsuta HOM05D005409 ORTHO05D006456 2.8e-60 237.3 608 35.2
arahy.Tifrunner.gnm1.ann1.QZ9QK3 Arachis hypogaea HOM05D005409 ORTHO05D006456 1.4e-59 235.0 644 34.9
CDE01G0308 Ceratophyllum demersum HOM05D005409 ORTHO05D006456 1.5e-58 231.5 608 34.9
Thhalv10007161m.g Eutrema salsugineum HOM05D005409 ORTHO05D006456 1.3e-57 228.4 612 34.5
Sabra17G0028000 Salix brachista HOM05D005409 ORTHO05D006456 1.3e-57 228.4 679 33.1
C05p09680 Brassica napus HOM05D005409 ORTHO05D006456 2.2e-57 227.6 599 34.2
Potri.007G119200 Populus trichocarpa HOM05D005409 ORTHO05D006456 4.9e-57 226.5 630 33.0
BcaC05g25024 Brassica carinata HOM05D005409 ORTHO05D006456 6.4e-57 226.1 599 34.1
BraA06t24009Z Brassica rapa HOM05D005409 ORTHO05D006456 7.0e-56 222.6 592 33.4
AL1G22590 Arabidopsis lyrata HOM05D005409 ORTHO05D006456 1.0e-54 218.8 606 35.5
BolC5t29709H Brassica oleracea HOM05D005409 ORTHO05D006456 1.0e-54 218.8 583 33.8
A06p08100 Brassica napus HOM05D005409 ORTHO05D006456 1.3e-54 218.4 598 33.4
Carub.0001s1109 Capsella rubella HOM05D005409 ORTHO05D006456 3.9e-54 216.9 595 34.8
HPP92_000870 Vanilla planifolia HOM05D005409 ORTHO05D006456 3.9e-54 216.9 624 36.2
Ah.09g237100 Amaranthus hybridus HOM05D000067 ORTHO05D006456 5.0e-54 216.5 537 35.0
Atru.chr6.3116 Acer truncatum HOM05D005409 ORTHO05D006456 2.5e-53 214.2 432 39.1
RcHm_v2.0_Chr5g0004681 Rosa chinensis HOM05D005409 ORTHO05D006456 7.3e-53 212.6 470 36.2
BcaNung07116 Brassica carinata HOM05D005409 ORTHO05D006456 1.1e-51 208.8 410 39.0
Sabra07G0096100 Salix brachista HOM05D005409 ORTHO05D006456 4.9e-49 199.9 740 29.6
Atru.chr10.2047 Acer truncatum HOM05D005409 ORTHO05D006456 1.7e-41 174.9 243 45.3
GSVIVG01006635001 Vitis vinifera HOM05D005409 ORTHO05D006456 1.4e-40 171.8 112 75.0
RcHm_v2.0_Chr5g0004671 Rosa chinensis HOM05D005409 ORTHO05D006456 1.9e-40 171.4 112 74.1
Os07g0546100 Oryza sativa ssp. japonica HOM05D005409 ORTHO05D006456 1.2e-39 168.7 598 33.4
ATR0804G077 Amborella trichopoda HOM05D005409 ORTHO05D006456 6.0e-39 166.4 718 32.9
Atru.chr10.2048 Acer truncatum HOM05D005409 ORTHO05D006456 7.8e-39 166.0 314 39.5
Zm00001eb323520 Zea mays HOM05D005409 ORTHO05D006456 1.4e-35 155.2 599 31.2
Zm00001eb106500 Zea mays HOM05D005409 ORTHO05D006456 8.4e-25 119.4 380 33.4
Mapoly0113s0049 Marchantia polymorpha HOM05D005409 ORTHO05D006456 9.6e-21 105.9 108 56.5
Pp3c20_3440 Physcomitrium patens HOM05D005409 ORTHO05D006456 3.7e-20 104.0 110 53.6
Cpa.g.sc81.1 Carica papaya HOM05D005409 ORTHO05D006456 1.5e-18 98.6 190 37.4
Haze_06667 Corylus avellana HOM05D005409 ORTHO05D006456 4.9e-17 93.6 152 41.4
AagrBONN_evm.TU.Sc2ySwM_228.455 Anthoceros agrestis HOM05D005409 ORTHO05D006456 6.4e-17 93.2 114 50.9
SMO118G0050 Selaginella moellendorffii HOM05D005409 ORTHO05D006456 2.4e-16 91.3 263 36.9
CBR_g36658 Chara braunii HOM05D005409 ORTHO05D006456 8.2e-12 76.3 113 44.2
CAN.G466.8 Capsicum annuum HOM05D005409 ORTHO05D006456 1.8e-06 58.5 57 47.4


User provided reference genes

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