Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0017235 Camellia sinensis var. sinensis HOM05D003755 ORTHO05D004385 1.7e-183 646.0 354 100.0
CSS0014334 Camellia sinensis var. sinensis HOM05D003755 ORTHO05D004385 1.1e-134 483.8 360 76.7
Dinv17826 Davidia involucrata HOM05D003755 ORTHO05D004385 1.6e-128 463.4 314 76.1
Hma1.2p1_0091F.1_g046190 Hydrangea macrophylla HOM05D003755 ORTHO05D004385 3.0e-127 459.1 359 68.8
Manes.16G011500 Manihot esculenta HOM05D003755 ORTHO05D004385 2.8e-125 452.6 357 66.1
Thecc.06G215100 Theobroma cacao HOM05D003755 ORTHO05D004385 4.8e-125 451.8 314 72.0
Ciclev10015811m.g Citrus clementina HOM05D003755 ORTHO05D004385 3.1e-124 449.1 316 70.3
Duzib160G0429 Durio zibethinus HOM05D003755 ORTHO05D004385 2.6e-123 446.0 314 71.7
PGR004G2273 Punica granatum HOM05D003755 ORTHO05D004385 2.6e-123 446.0 314 72.6
Duzib192G0935 Durio zibethinus HOM05D003755 ORTHO05D004385 6.4e-122 441.4 314 71.3
Gohir.A06G145950 Gossypium hirsutum HOM05D003755 ORTHO05D004385 1.4e-121 440.3 314 70.4
Atru.chr10.2154 Acer truncatum HOM05D003755 ORTHO05D004385 3.2e-121 439.1 330 67.3
CANSAT56G3751 Cannabis sativa HOM05D003755 ORTHO05D004385 4.6e-120 435.3 320 71.6
Cpa.g.sc198.13 Carica papaya HOM05D003755 ORTHO05D004385 7.9e-120 434.5 317 69.1
Cc02_g11630 Coffea canephora HOM05D003755 ORTHO05D004385 7.9e-120 434.5 315 70.2
TWI38G1592 Tripterygium wilfordii HOM05D003755 ORTHO05D004385 1.0e-119 434.1 314 69.1
TWI38G1222 Tripterygium wilfordii HOM05D003755 ORTHO05D004385 1.8e-119 433.3 316 68.0
CiPaw.09G088000 Carya illinoinensis HOM05D003755 ORTHO05D004385 2.3e-119 433.0 316 70.9
Eucgr.E04113 Eucalyptus grandis HOM05D003755 ORTHO05D004385 2.3e-119 433.0 319 70.2
Cfa000266 Carpinus fangiana HOM05D003755 ORTHO05D004385 6.7e-119 431.4 320 70.0
Glyma.20G141900 Glycine max HOM05D003755 ORTHO05D004385 8.7e-119 431.0 313 70.0
Lsat_1_v5_gn_4_58721 Lactuca sativa HOM05D003755 ORTHO05D004385 8.7e-119 431.0 314 69.7
CsaV3_6G049210 Cucumis sativus L. HOM05D003755 ORTHO05D004385 1.5e-118 430.3 316 71.2
Prupe.4G025400 Prunus persica HOM05D003755 ORTHO05D004385 1.5e-118 430.3 316 70.9
Gohir.D05G171400 Gossypium hirsutum HOM05D003755 ORTHO05D004385 2.5e-118 429.5 314 68.8
ClCG01G022150 Citrullus lanatus HOM05D003755 ORTHO05D004385 3.3e-118 429.1 316 70.9
ECA234G3589 Erigeron canadensis HOM05D003755 ORTHO05D004385 3.3e-118 429.1 314 68.8
Phvul.007G053000 Phaseolus vulgaris HOM05D003755 ORTHO05D004385 3.3e-118 429.1 313 70.9
MELO3C007374.2 Cucumis melo HOM05D003755 ORTHO05D004385 4.3e-118 428.7 316 70.9
VMungo0720G2911 Vigna mungo HOM05D003755 ORTHO05D004385 5.6e-118 428.3 313 70.9
AT1G61790 Arabidopsis thaliana HOM05D003755 ORTHO05D004385 7.4e-118 427.9 314 65.0
AL2G14320 Arabidopsis lyrata HOM05D003755 ORTHO05D004385 1.3e-117 427.2 314 65.0
QL05p074736 Quercus lobata HOM05D003755 ORTHO05D004385 1.3e-117 427.2 314 68.8
MBI18_g01410_MAGBIO Magnolia biondii HOM05D003755 ORTHO05D004385 1.6e-117 426.8 314 68.5
Glyma.10G251600 Glycine max HOM05D003755 ORTHO05D004385 2.1e-117 426.4 313 70.9
Gohir.A05G168300 Gossypium hirsutum HOM05D003755 ORTHO05D004385 2.8e-117 426.0 314 68.2
FAN21G0915 Fragaria x ananassa HOM05D003755 ORTHO05D004385 4.8e-117 425.2 318 70.1
Medtr1g105470 Medicago truncatula HOM05D003755 ORTHO05D004385 4.8e-117 425.2 313 71.2
Oeu016525.1 Olea europaea HOM05D003755 ORTHO05D004385 6.2e-117 424.9 315 69.8
Sp2g02750 Schrenkiella parvula HOM05D003755 ORTHO05D004385 1.8e-116 423.3 314 64.6
Atru.chr10.2153 Acer truncatum HOM05D003755 ORTHO05D004385 3.1e-116 422.5 322 67.1
CARHR050550 Cardamine hirsuta HOM05D003755 ORTHO05D004385 5.3e-116 421.8 316 64.6
FvH4_3g02600 Fragaria vesca HOM05D003755 ORTHO05D004385 6.9e-116 421.4 317 71.0
BcaC02g10535 Brassica carinata HOM05D003755 ORTHO05D004385 9.0e-116 421.0 314 65.0
C04p27760 Brassica napus HOM05D003755 ORTHO05D004385 9.0e-116 421.0 314 65.0
BolC4t24319H Brassica oleracea HOM05D003755 ORTHO05D004385 9.0e-116 421.0 314 65.0
TAR626G0320 Trochodendron aralioides HOM05D003755 ORTHO05D004385 1.5e-115 420.2 314 69.7
MSTRG.14647 Avicennia marina HOM05D003755 ORTHO05D004385 4.5e-115 418.7 315 68.6
THA.LOC104823520 Tarenaya hassleriana HOM05D003755 ORTHO05D004385 4.5e-115 418.7 314 63.7
BcaC06g31863 Brassica carinata HOM05D003755 ORTHO05D004385 5.8e-115 418.3 314 64.6
Aa31LG2G9060 Aethionema arabicum HOM05D003755 ORTHO05D004385 7.6e-115 417.9 314 64.0
Thhalv10023566m.g Eutrema salsugineum HOM05D003755 ORTHO05D004385 9.9e-115 417.5 314 64.0
Carub.0002s0327 Capsella rubella HOM05D003755 ORTHO05D004385 1.3e-114 417.2 313 64.2
Ca_10975_v3 Cicer arietinum L. HOM05D003755 ORTHO05D004385 2.9e-114 416.0 313 69.3
A01p30670 Brassica napus HOM05D003755 ORTHO05D004385 6.4e-114 414.8 314 64.3
A01p30690 Brassica napus HOM05D003755 ORTHO05D004385 6.4e-114 414.8 314 64.3
THA.LOC104809515 Tarenaya hassleriana HOM05D003755 ORTHO05D004385 6.4e-114 414.8 315 63.8
Psat6g210560 Pisum sativum HOM05D003755 ORTHO05D004385 8.4e-114 414.5 311 69.1
Potri.011G025700 Populus trichocarpa HOM05D003755 ORTHO05D004385 1.1e-113 414.1 314 67.2
BraA01t03198Z Brassica rapa HOM05D003755 ORTHO05D004385 1.4e-113 413.7 314 64.0
FAN25G0829 Fragaria x ananassa HOM05D003755 ORTHO05D004385 1.4e-113 413.7 307 71.7
Migut.H01555 Erythranthe guttata HOM05D003755 ORTHO05D004385 2.4e-113 412.9 314 65.9
Sabra11G0016200 Salix brachista HOM05D003755 ORTHO05D004385 2.4e-113 412.9 312 67.9
Sabra11G0021900 Salix brachista HOM05D003755 ORTHO05D004385 2.4e-113 412.9 312 67.9
C01p39060 Brassica napus HOM05D003755 ORTHO05D004385 5.5e-113 411.8 314 63.7
BolC1t03856H Brassica oleracea HOM05D003755 ORTHO05D004385 5.5e-113 411.8 314 63.7
BcaB04g20374 Brassica carinata HOM05D003755 ORTHO05D004385 1.2e-112 410.6 316 63.9
Sopen03g005650 Solanum pennellii HOM05D003755 ORTHO05D004385 1.2e-112 410.6 314 65.9
MD00G1180300 Malus domestica HOM05D003755 ORTHO05D004385 2.7e-112 409.5 316 67.7
Lj5g0019176 Lotus japonicus HOM05D003755 ORTHO05D004385 3.5e-112 409.1 320 65.9
AUR62012654 Chenopodium quinoa HOM05D003755 ORTHO05D004385 4.6e-112 408.7 313 66.8
TAR624G0284 Trochodendron aralioides HOM05D003755 ORTHO05D004385 4.6e-112 408.7 355 63.7
PGSC0003DMG400024071 Solanum tuberosum HOM05D003755 ORTHO05D004385 1.0e-111 407.5 314 65.3
Rhsim13G0157400 Rhododendron simsii HOM05D003755 ORTHO05D004385 1.3e-111 407.1 269 74.0
Aqoxy4G01977 Aquilegia oxysepala HOM05D003755 ORTHO05D004385 2.3e-111 406.4 312 67.6
Manes.17G035900 Manihot esculenta HOM05D003755 ORTHO05D004385 2.3e-111 406.4 355 59.7
Sc05g0008910 Simmondsia chinensis HOM05D003755 ORTHO05D004385 3.0e-111 406.0 313 65.5
Solyc03g031790.1 Solanum lycopersicum HOM05D003755 ORTHO05D004385 3.9e-111 405.6 314 65.0
COL.COLO4_31737 Corchorus olitorius HOM05D003755 ORTHO05D004385 1.9e-110 403.3 317 64.0
Dinv20022 Davidia involucrata HOM05D003755 ORTHO05D004385 2.5e-110 402.9 350 67.7
DCAR_028162 Daucus carota HOM05D003755 ORTHO05D004385 4.3e-110 402.1 315 67.0
PSO541G6483 Papaver somniferum HOM05D003755 ORTHO05D004385 1.6e-109 400.2 314 67.8
PSO675G2634 Papaver somniferum HOM05D003755 ORTHO05D004385 1.6e-109 400.2 314 67.8
Ah.09g235250 Amaranthus hybridus HOM05D003755 ORTHO05D004385 3.7e-109 399.1 312 65.4
EL10Ac8g19999 Beta vulgaris HOM05D003755 ORTHO05D004385 8.2e-109 397.9 312 66.0
unitig_26.g9395 Utricularia gibba HOM05D003755 ORTHO05D004385 3.1e-108 396.0 356 58.7
Lalb_Chr21g0307811 Lupinus albus HOM05D003755 ORTHO05D004385 6.9e-108 394.8 316 64.9
MD10G1315200 Malus domestica HOM05D003755 ORTHO05D004385 1.5e-107 393.7 308 68.5
Gohir.D09G069500 Gossypium hirsutum HOM05D003755 ORTHO05D004385 1.1e-105 387.5 314 62.7
Gorai.006G083700 Gossypium raimondii HOM05D003755 ORTHO05D004385 1.1e-105 387.5 314 62.7
Nitab4.5_0000091g0500 Nicotiana tabacum HOM05D003755 ORTHO05D004385 1.1e-105 387.5 345 59.4
Sed0012988 Sechium edule HOM05D003755 ORTHO05D004385 2.5e-105 386.3 322 62.7
Nn1g07049 Nelumbo nucifera HOM05D003755 ORTHO05D004385 5.7e-102 375.2 318 61.9
ATR0109G031 Amborella trichopoda HOM05D003755 ORTHO05D004385 7.4e-102 374.8 313 61.0
Thhalv10008090m.g Eutrema salsugineum HOM05D003755 ORTHO05D004385 1.8e-100 370.2 314 57.6
Zm00001eb043070 Zea mays HOM05D003755 ORTHO05D004385 2.4e-100 369.8 314 59.9
Peaxi162Scf00079g00073 Petunia axillaris HOM05D003755 ORTHO05D004385 9.0e-100 367.9 297 64.6
Os03g0565100 Oryza sativa ssp. japonica HOM05D003755 ORTHO05D004385 1.5e-99 367.1 314 58.0
CDE05G0706 Ceratophyllum demersum HOM05D003755 ORTHO05D004385 2.6e-99 366.3 312 59.3
Gorai.010G177400 Gossypium raimondii HOM05D003755 ORTHO05D004385 7.6e-99 364.8 314 60.8
Nitab4.5_0005793g0040 Nicotiana tabacum HOM05D003755 ORTHO05D004385 7.6e-99 364.8 315 59.4
TPR.G5472 Trifolium pratense HOM05D003755 ORTHO05D004385 7.2e-97 358.2 279 68.1
Lj2A272T65 Lonicera japonica HOM05D003755 ORTHO05D004385 9.4e-97 357.8 320 62.2
SGA_v2.0_scaffold89G27449 Striga asiatica HOM05D003755 ORTHO05D004385 6.7e-95 351.7 315 56.5
Sp1g10170 Schrenkiella parvula HOM05D003755 ORTHO05D004385 2.5e-94 349.7 315 56.2
TWI38G0036 Tripterygium wilfordii HOM05D003755 ORTHO05D004385 3.7e-93 345.9 303 61.1
AL1G22670 Arabidopsis lyrata HOM05D003755 ORTHO05D004385 1.8e-92 343.6 314 55.4
PGSC0003DMG400002072 Solanum tuberosum HOM05D003755 ORTHO05D004385 1.8e-92 343.6 312 55.8
AT1G11560 Arabidopsis thaliana HOM05D003755 ORTHO05D004385 4.1e-92 342.4 314 55.4
Nitab4.5_0002196g0020 Nicotiana tabacum HOM05D003755 ORTHO05D004385 1.2e-91 340.9 307 57.0
Lalb_Chr06g0164871 Lupinus albus HOM05D003755 ORTHO05D004385 1.5e-91 340.5 313 57.2
Gohir.D06G152000 Gossypium hirsutum HOM05D003755 ORTHO05D004385 3.4e-91 339.3 247 69.2
Peaxi162Scf00241g00121 Petunia axillaris HOM05D003755 ORTHO05D004385 7.7e-91 338.2 303 58.1
SEGI_11297 Sequoiadendron giganteum HOM05D003755 ORTHO05D004385 7.7e-91 338.2 310 58.1
Sopen02g024900 Solanum pennellii HOM05D003755 ORTHO05D004385 7.7e-91 338.2 312 55.1
SGA_v2.0_scaffold114G32031 Striga asiatica HOM05D003755 ORTHO05D004385 7.7e-91 338.2 266 63.2
SalBow8G5594 Salvia bowleyana HOM05D003755 ORTHO05D004385 3.8e-90 335.9 319 54.2
CDE11G0393 Ceratophyllum demersum HOM05D003755 ORTHO05D004385 1.4e-89 334.0 312 56.1
Solyc02g080180.1 Solanum lycopersicum HOM05D003755 ORTHO05D004385 2.5e-89 333.2 312 54.2
PGSC0003DMG400010547 Solanum tuberosum HOM05D003755 ORTHO05D004385 3.2e-89 332.8 303 57.1
Solyc10g008090.1 Solanum lycopersicum HOM05D003755 ORTHO05D004385 4.2e-89 332.4 307 56.7
Sopen10g003960 Solanum pennellii HOM05D003755 ORTHO05D004385 7.2e-89 331.6 303 57.1
CAN.G569.37 Capsicum annuum HOM05D003755 ORTHO05D004385 1.2e-88 330.9 315 54.6
CARHR011840 Cardamine hirsuta HOM05D003755 ORTHO05D004385 2.7e-88 329.7 315 54.9
Lsat_1_v5_gn_1_121441 Lactuca sativa HOM05D003755 ORTHO05D004385 2.3e-87 326.6 314 51.9
HanXRQChr01g0003661 Helianthus annuus HOM05D003755 ORTHO05D004385 3.0e-87 326.2 313 52.1
Mapoly0061s0113 Marchantia polymorpha HOM05D003755 ORTHO05D004385 6.7e-87 325.1 313 51.1
Sabra04G0011400 Salix brachista HOM05D003755 ORTHO05D004385 6.7e-87 325.1 382 48.7
Carub.0001s1117 Capsella rubella HOM05D003755 ORTHO05D004385 5.7e-86 322.0 314 53.5
Lj1A1226T40 Lonicera japonica HOM05D003755 ORTHO05D004385 9.7e-86 321.2 249 65.5
C08p14530 Brassica napus HOM05D003755 ORTHO05D004385 1.7e-82 310.5 317 51.1
BcaB03g13253 Brassica carinata HOM05D003755 ORTHO05D004385 5.0e-82 308.9 315 51.7
A08p33440 Brassica napus HOM05D003755 ORTHO05D004385 5.0e-82 308.9 316 50.6
BraA08t35260Z Brassica rapa HOM05D003755 ORTHO05D004385 6.5e-82 308.5 316 50.3
Pp3c26_7270 Physcomitrium patens HOM05D003755 ORTHO05D004385 6.5e-82 308.5 312 49.7
BcaC07g38668 Brassica carinata HOM05D003755 ORTHO05D004385 8.5e-82 308.1 318 50.0
BolC8t49101H Brassica oleracea HOM05D003755 ORTHO05D004385 8.5e-82 308.1 318 50.0
SMO118G0372 Selaginella moellendorffii HOM05D003755 ORTHO05D004385 1.6e-80 303.9 314 51.3
Pp3c3_13650 Physcomitrium patens HOM05D003755 ORTHO05D004385 2.7e-80 303.1 312 51.3
Gohir.A09G069600 Gossypium hirsutum HOM05D003755 ORTHO05D004385 5.2e-79 298.9 308 53.6
Haze_06749 Corylus avellana HOM05D003755 ORTHO05D004385 1.1e-78 297.7 237 66.2
AagrBONN_evm.TU.Sc2ySwM_362.2118 Anthoceros agrestis HOM05D003755 ORTHO05D004385 3.3e-78 296.2 313 50.5
Nitab4.5_0002196g0010 Nicotiana tabacum HOM05D000234 ORTHO05D004385 1.3e-77 294.3 268 57.5
Pp3c10_1910 Physcomitrium patens HOM05D003755 ORTHO05D004385 4.8e-77 292.4 312 47.8
AagrBONN_evm.TU.Sc2ySwM_362.2344 Anthoceros agrestis HOM05D003755 ORTHO05D004385 2.5e-73 280.0 314 48.1
CAN.G404.10 Capsicum annuum HOM05D003755 ORTHO05D004385 3.2e-73 279.6 189 70.4
AUR62021999 Chenopodium quinoa HOM05D003755 ORTHO05D004385 5.5e-73 278.9 189 70.9
Nitab4.5_0010745g0030 Nicotiana tabacum HOM05D003755 ORTHO05D004385 2.7e-72 276.6 191 68.6
MBI14_g15203_MAGBIO Magnolia biondii HOM05D003755 ORTHO05D004385 4.0e-71 272.7 256 56.2
Nn1g03617 Nelumbo nucifera HOM05D003755 ORTHO05D004385 8.8e-71 271.6 179 72.1
MBI06_g27714_MAGBIO Magnolia biondii HOM05D003755 ORTHO05D004385 1.2e-67 261.2 190 67.4
Nitab4.5_0002347g0110 Nicotiana tabacum HOM05D003755 ORTHO05D004385 1.5e-65 254.2 189 63.5
CBR_g36660 Chara braunii HOM05D003755 ORTHO05D004385 2.6e-62 243.4 313 45.0
MBI19_g26612_MAGBIO Magnolia biondii HOM05D003755 ORTHO05D004385 1.7e-61 240.7 182 67.0
Peaxi162Scf00427g00012 Petunia axillaris HOM05D003755 ORTHO05D004385 3.5e-59 233.0 190 58.4
Actinidia26947 Actinidia chinensis HOM05D003755 ORTHO05D004385 2.3e-58 230.3 229 59.4
CAN.G782.22 Capsicum annuum HOM05D003755 ORTHO05D004385 3.6e-56 223.0 232 49.1
Nitab4.5_0002645g0040 Nicotiana tabacum HOM05D003755 ORTHO05D004385 9.8e-54 214.9 184 57.6
Lsat_1_v5_gn_3_29240 Lactuca sativa HOM05D003755 ORTHO05D004385 9.2e-52 208.4 302 39.7
Sed0022949 Sechium edule HOM05D003755 ORTHO05D004385 9.2e-52 208.4 197 58.4
CBR_g46234 Chara braunii HOM05D003755 ORTHO05D004385 1.0e-50 204.9 310 38.1
TPR.G16992 Trifolium pratense HOM05D003755 ORTHO05D004385 2.4e-44 183.7 151 64.9
CAN.G782.11 Capsicum annuum HOM05D003755 ORTHO05D004385 2.1e-35 154.1 163 49.1
BraA01t03199Z Brassica rapa HOM05D003755 ORTHO05D004385 8.6e-34 148.7 133 55.6
BcaC04g22351 Brassica carinata HOM05D003755 ORTHO05D004385 4.3e-33 146.4 104 71.2
Lsat_1_v5_gn_7_27941 Lactuca sativa HOM05D003755 ORTHO05D004385 7.3e-33 145.6 174 46.0
Lsat_1_v5_gn_7_47961 Lactuca sativa HOM05D003755 ORTHO05D004385 2.1e-32 144.1 96 71.9
Lsat_1_v5_gn_4_80500 Lactuca sativa HOM05D003755 ORTHO05D004385 2.7e-27 127.1 89 67.4
CAN.G782.12 Capsicum annuum HOM05D003755 ORTHO05D004385 4.6e-27 126.3 99 62.6
MD02G1269300 Malus domestica HOM05D003755 ORTHO05D004385 1.8e-23 114.4 77 74.0
Cre16.g675602 Chlamydomonas reinhardtii HOM05D003755 ORTHO05D004385 5.2e-23 112.8 311 29.9
MD02G1269200 Malus domestica HOM05D003755 ORTHO05D004385 1.3e-18 98.2 76 63.2
QL08p007617 Quercus lobata HOM05D003755 ORTHO05D004385 1.7e-18 97.8 81 56.8
QL10p045362 Quercus lobata HOM05D003755 ORTHO05D004385 1.7e-18 97.8 80 57.5
C09p20250 Brassica napus HOM05D003755 ORTHO05D004385 6.6e-18 95.9 75 66.7
Lsat_1_v5_gn_7_47981 Lactuca sativa HOM05D003755 ORTHO05D004385 9.6e-17 92.0 98 51.0
BolC9t54930H Brassica oleracea HOM05D003755 ORTHO05D004385 5.8e-14 82.8 57 68.4
EL10As1g23076 Beta vulgaris HOM05D003755 ORTHO05D004385 3.8e-13 80.1 48 77.1
BcaB07g31286 Brassica carinata HOM05D003755 ORTHO05D004385 5.4e-12 76.3 74 58.1
QL03p066087 Quercus lobata HOM05D003755 ORTHO05D004385 1.1e-07 62.0 52 57.7
AagrBONN_evm.TU.Sc2ySwM_228.3672 Anthoceros agrestis HOM05D003755 ORTHO05D004385 9.9e-06 55.5 70 42.9


User provided reference genes

Program Settings