Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0017234 Camellia sinensis var. sinensis HOM05D006489 ORTHO05D007556 2.1e-244 849.0 520 100.0
CSS0036232 Camellia sinensis var. sinensis HOM05D006489 ORTHO05D007556 4.3e-242 841.3 520 99.6
Actinidia35341 Actinidia chinensis HOM05D006489 ORTHO05D007556 1.7e-145 520.4 527 58.6
vmacro09717 Vaccinium macrocarpon HOM05D006489 ORTHO05D007556 4.3e-141 505.8 523 56.6
Dinv22265 Davidia involucrata HOM05D006489 ORTHO05D007556 1.5e-130 470.7 504 54.6
TAR627G0165 Trochodendron aralioides HOM05D006489 ORTHO05D007556 7.1e-120 435.3 521 51.1
RhsimUnG0250900 Rhododendron simsii HOM05D006489 ORTHO05D007556 9.6e-117 424.9 663 44.3
Hma1.2p1_1162F.1_g262610 Hydrangea macrophylla HOM05D006489 ORTHO05D007556 1.4e-112 411.0 424 56.4
Hma1.2p1_1162F.1_g262600 Hydrangea macrophylla HOM05D006489 ORTHO05D007556 2.5e-96 357.1 389 54.5
Haze_09673 Corylus avellana HOM05D006489 ORTHO05D007556 5.5e-96 355.9 557 42.2
CiPaw.12G129400 Carya illinoinensis HOM05D006489 ORTHO05D007556 6.1e-95 352.4 461 50.3
QL08p010454 Quercus lobata HOM05D006489 ORTHO05D007556 2.3e-94 350.5 558 42.3
Ciclev10008166m.g Citrus clementina HOM05D006489 ORTHO05D007556 2.8e-92 343.6 538 44.2
Oeu062694.1 Olea europaea HOM05D006489 ORTHO05D007556 5.0e-89 332.8 425 48.5
COL.COLO4_19762 Corchorus olitorius HOM05D006489 ORTHO05D007556 1.1e-88 331.6 423 48.2
Peaxi162Scf00964g00023 Petunia axillaris HOM05D006489 ORTHO05D007556 6.1e-87 325.9 520 42.9
Potri.011G139200 Populus trichocarpa HOM05D006489 ORTHO05D007556 6.1e-87 325.9 524 43.3
MBI18_g45561_MAGBIO Magnolia biondii HOM05D006489 ORTHO05D007556 1.8e-86 324.3 534 40.4
Sabra11G0125100 Salix brachista HOM05D006489 ORTHO05D007556 8.8e-86 322.0 522 44.3
TWI15G0832 Tripterygium wilfordii HOM05D006489 ORTHO05D007556 2.6e-85 320.5 524 42.2
Duzib213G0414 Durio zibethinus HOM05D006489 ORTHO05D007556 5.7e-85 319.3 517 39.7
MBI02_g07154_MAGBIO Magnolia biondii HOM05D006489 ORTHO05D007556 7.4e-85 318.9 449 44.8
Gorai.004G027700 Gossypium raimondii HOM05D006489 ORTHO05D007556 9.7e-85 318.5 530 41.1
Cpa.g.sc97.9 Carica papaya HOM05D006489 ORTHO05D007556 6.3e-84 315.8 418 48.1
Cfa020351 Carpinus fangiana HOM05D006489 ORTHO05D007556 6.3e-84 315.8 604 38.7
PGSC0003DMG400022321 Solanum tuberosum HOM05D006489 ORTHO05D007556 5.3e-83 312.8 531 41.2
Solyc07g064570.3 Solanum lycopersicum HOM05D006489 ORTHO05D007556 1.3e-81 308.1 532 41.2
Gohir.D08G030200 Gossypium hirsutum HOM05D006489 ORTHO05D007556 2.2e-81 307.4 529 40.5
Sopen07g032750 Solanum pennellii HOM05D006489 ORTHO05D007556 2.9e-81 307.0 530 40.9
Lj1A872T56 Lonicera japonica HOM05D006489 ORTHO05D007556 1.1e-80 305.1 343 54.5
CAN.G337.129 Capsicum annuum HOM05D006489 ORTHO05D007556 1.5e-80 304.7 549 47.2
Gohir.A08G019600 Gossypium hirsutum HOM05D006489 ORTHO05D007556 4.7e-79 299.7 526 39.9
Nn1g03547 Nelumbo nucifera HOM05D006489 ORTHO05D007556 2.3e-78 297.4 518 38.8
Cc09_g09720 Coffea canephora HOM05D006489 ORTHO05D007556 6.7e-78 295.8 527 40.6
GSVIVG01037644001 Vitis vinifera HOM05D006489 ORTHO05D007556 1.5e-77 294.7 519 39.7
MELO3C013233.2 Cucumis melo HOM05D006489 ORTHO05D007556 3.3e-77 293.5 552 38.6
Sed0018772 Sechium edule HOM05D006489 ORTHO05D007556 5.7e-77 292.7 560 39.1
Nitab4.5_0011175g0010 Nicotiana tabacum HOM05D006489 ORTHO05D007556 7.5e-77 292.4 487 41.7
DCAR_022559 Daucus carota HOM05D006489 ORTHO05D007556 1.3e-76 291.6 531 40.3
Manes.03G129000 Manihot esculenta HOM05D006489 ORTHO05D007556 4.1e-75 286.6 518 40.3
Migut.M01768 Erythranthe guttata HOM05D006489 ORTHO05D007556 4.5e-74 283.1 434 43.8
Prupe.4G212300 Prunus persica HOM05D006489 ORTHO05D007556 6.5e-73 279.3 555 36.4
Atru.chr2.3342 Acer truncatum HOM05D006489 ORTHO05D007556 1.1e-72 278.5 325 50.2
Aqoxy1G03602 Aquilegia oxysepala HOM05D006489 ORTHO05D007556 4.2e-72 276.6 443 43.8
ATR0752G219 Amborella trichopoda HOM05D006489 ORTHO05D007556 7.2e-72 275.8 433 41.8
Nitab4.5_0001913g0140 Nicotiana tabacum HOM05D006489 ORTHO05D007556 7.2e-72 275.8 487 40.9
PGR083G1541 Punica granatum HOM05D006489 ORTHO05D007556 1.4e-70 271.6 427 42.2
ClCG05G014300 Citrullus lanatus HOM05D006489 ORTHO05D007556 5.2e-70 269.6 543 37.6
FAN25G3282 Fragaria x ananassa HOM05D006489 ORTHO05D007556 1.1e-67 261.9 438 39.7
HanXRQChr03g0076541 Helianthus annuus HOM05D006489 ORTHO05D007556 1.1e-67 261.9 432 44.9
Sc03g0008610 Simmondsia chinensis HOM05D006489 ORTHO05D007556 2.4e-67 260.8 380 42.4
LjContig00272g0011286 Lotus japonicus HOM05D006489 ORTHO05D007556 7.0e-67 259.2 462 40.7
SGA_v2.0_scaffold80G25948 Striga asiatica HOM05D006489 ORTHO05D007556 5.9e-66 256.1 425 42.6
Lsat_1_v5_gn_9_94040 Lactuca sativa HOM05D006489 ORTHO05D007556 1.0e-65 255.4 528 40.0
RcHm_v2.0_Chr5g0039401 Rosa chinensis HOM05D006489 ORTHO05D007556 1.3e-65 255.0 509 36.1
HanXRQChr08g0220561 Helianthus annuus HOM05D006489 ORTHO05D007556 5.0e-65 253.1 548 39.1
TPR.G1166 Trifolium pratense HOM05D006489 ORTHO05D007556 9.5e-64 248.8 464 39.9
Atru.BG.151.p Acer truncatum HOM05D006489 ORTHO05D007556 2.1e-63 247.7 382 42.9
Ca_06317_v3 Cicer arietinum L. HOM05D006489 ORTHO05D007556 3.6e-63 246.9 554 39.4
Hund23251 Selenicereus undatus HOM05D006489 ORTHO05D007556 6.1e-63 246.1 445 39.3
Eucgr.F00766 Eucalyptus grandis HOM05D006489 ORTHO05D007556 1.0e-62 245.4 371 44.5
FAN21G0022 Fragaria x ananassa HOM05D006489 ORTHO05D007556 1.4e-62 245.0 358 43.3
FvH4_3g22630 Fragaria vesca HOM05D006489 ORTHO05D007556 5.2e-62 243.0 360 43.6
AUR62015766 Chenopodium quinoa HOM05D006489 ORTHO05D007556 1.2e-61 241.9 606 33.3
ECA240G0124 Erigeron canadensis HOM05D006489 ORTHO05D007556 3.4e-61 240.4 436 42.0
VMungo0647G1504 Vigna mungo HOM05D006489 ORTHO05D007556 3.4e-61 240.4 505 38.0
Sed0021471 Sechium edule HOM05D006489 ORTHO05D007556 9.8e-61 238.8 411 40.1
MD03G1201600 Malus domestica HOM05D006489 ORTHO05D007556 1.7e-60 238.0 558 34.6
CANSAT11G2482 Cannabis sativa HOM05D006489 ORTHO05D007556 2.8e-60 237.3 576 34.9
CsaV3_7G021220 Cucumis sativus L. HOM05D006489 ORTHO05D007556 4.9e-60 236.5 520 36.0
Glyma.02G290600 Glycine max HOM05D006489 ORTHO05D007556 1.1e-59 235.3 469 38.8
Ca_25386_v3 Cicer arietinum L. HOM05D006489 ORTHO05D007556 4.1e-59 233.4 459 41.0
AT3G20490 Arabidopsis thaliana HOM05D006489 ORTHO05D007556 1.6e-58 231.5 522 34.5
CARHR096250 Cardamine hirsuta HOM05D006489 ORTHO05D007556 1.7e-57 228.0 527 34.5
Aa31LG8G7280 Aethionema arabicum HOM05D006489 ORTHO05D007556 2.9e-57 227.3 423 38.1
AL3G34270 Arabidopsis lyrata HOM05D006489 ORTHO05D007556 2.9e-57 227.3 420 37.4
Phvul.008G267300 Phaseolus vulgaris HOM05D006489 ORTHO05D007556 3.8e-57 226.9 505 36.4
EL10Ac4g07823 Beta vulgaris HOM05D006489 ORTHO05D007556 1.9e-56 224.6 580 31.2
Medtr5g092580 Medicago truncatula HOM05D006489 ORTHO05D007556 2.1e-55 221.1 545 35.8
arahy.Tifrunner.gnm1.ann1.I0Q6ZZ Arachis hypogaea HOM05D006489 ORTHO05D007556 2.8e-55 220.7 501 38.5
Carub.0003s2045 Capsella rubella HOM05D006489 ORTHO05D007556 1.0e-54 218.8 514 34.4
Thecc.07G037900 Theobroma cacao HOM05D006489 ORTHO05D007556 1.4e-54 218.4 392 39.8
HPP92_013323 Vanilla planifolia HOM05D006489 ORTHO05D007556 2.9e-52 210.7 451 33.3
THA.LOC104817868 Tarenaya hassleriana HOM05D006489 ORTHO05D007556 1.1e-51 208.8 412 36.9
PSO675G7358 Papaver somniferum HOM05D006489 ORTHO05D007556 1.8e-51 208.0 346 40.8
CDE02G1695 Ceratophyllum demersum HOM05D006489 ORTHO05D007556 2.4e-51 207.6 460 35.9
arahy.Tifrunner.gnm1.ann1.X6VDEX Arachis hypogaea HOM05D006489 ORTHO05D007556 2.7e-50 204.1 505 36.4
PSO541G0970 Papaver somniferum HOM05D006489 ORTHO05D007556 3.5e-50 203.8 488 34.2
Lalb_Chr17g0348451 Lupinus albus HOM05D006489 ORTHO05D007556 1.3e-49 201.8 567 34.2
BcaB06g27045 Brassica carinata HOM05D006489 ORTHO05D007556 1.9e-48 198.0 462 34.8
CDE05G3553 Ceratophyllum demersum HOM05D006489 ORTHO05D007556 1.9e-48 198.0 460 35.2
AUR62020449 Chenopodium quinoa HOM05D006489 ORTHO05D007556 2.8e-47 194.1 571 30.6
BraA04t16706Z Brassica rapa HOM05D006489 ORTHO05D007556 8.0e-47 192.6 427 34.4
Psat2g011040 Pisum sativum HOM05D006489 ORTHO05D007556 1.5e-45 188.3 467 36.0
TPR.G36685 Trifolium pratense HOM05D006489 ORTHO05D007556 4.9e-44 183.3 497 35.2
Lalb_Chr10g0106941 Lupinus albus HOM05D006489 ORTHO05D007556 6.4e-44 183.0 371 37.5
Glyma.14G024100 Glycine max HOM05D006489 ORTHO05D007556 1.2e-42 178.7 374 36.1
FAN16G1490 Fragaria x ananassa HOM05D006489 ORTHO05D007556 3.9e-41 173.7 208 49.0
BcaC02g09533 Brassica carinata HOM05D006489 ORTHO05D007556 5.6e-40 169.9 526 31.4
BolC4t25966H Brassica oleracea HOM05D006489 ORTHO05D007556 5.6e-40 169.9 526 31.4
C04p43850 Brassica napus HOM05D006489 ORTHO05D007556 8.1e-39 166.0 526 31.6
Medtr6g033325 Medicago truncatula HOM05D006489 ORTHO05D007556 1.4e-38 165.2 527 32.8
A04p10340 Brassica napus HOM05D006489 ORTHO05D007556 3.1e-38 164.1 527 29.2
Thhalv10028177m.g Eutrema salsugineum HOM05D006489 ORTHO05D007556 4.4e-37 160.2 415 37.6
Actinidia10733 Actinidia chinensis HOM05D006489 ORTHO05D007556 1.3e-36 158.7 223 44.8
Lsat_1_v5_gn_7_108561 Lactuca sativa HOM05D006489 ORTHO05D007556 2.2e-36 157.9 527 30.6
Zm00001eb431300 Zea mays HOM05D006489 ORTHO05D007556 3.2e-35 154.1 399 32.3
Os04g0625100 Oryza sativa ssp. japonica HOM05D006489 ORTHO05D007556 3.5e-34 150.6 412 31.3
Sp7g05570 Schrenkiella parvula HOM05D006489 ORTHO05D007556 4.6e-34 150.2 579 28.2
unitig_62.g23281 Utricularia gibba HOM05D008272 ORTHO05D010429 1.1e-32 145.6 489 29.9
HanXRQChr11g0337701 Helianthus annuus HOM05D006489 ORTHO05D007556 7.3e-32 142.9 533 30.2
Psat1g097920 Pisum sativum HOM05D006489 ORTHO05D007556 5.2e-30 136.7 354 36.2
ECA236G1547 Erigeron canadensis HOM05D006489 ORTHO05D007556 5.4e-27 126.7 222 37.8
SEGI_05401 Sequoiadendron giganteum HOM05D006489 ORTHO05D007556 6.9e-22 109.8 544 25.7
Psat0s2568g0040 Pisum sativum HOM05D006489 ORTHO05D007556 9.0e-14 82.8 73 54.8
Rhsim03G0191000 Rhododendron simsii HOM05D006489 ORTHO05D007556 3.4e-13 80.9 201 36.3
Lj8A169G92 Lonicera japonica HOM05D006489 ORTHO05D007556 9.9e-13 79.3 60 63.3
Rhsim02G0082000 Rhododendron simsii HOM05D000432 ORTHO05D000320 6.9e-06 56.6 156 35.9


User provided reference genes

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