Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0017204 Camellia sinensis var. sinensis HOM05D011555 ORTHO05D013920 2.2e-165 585.5 286 100.0
CSS0048060 Camellia sinensis var. sinensis HOM05D011555 ORTHO05D013920 1.7e-101 373.2 269 65.1
CSS0020408 Camellia sinensis var. sinensis HOM05D011555 ORTHO05D013920 2.5e-100 369.4 283 63.3
CSS0024259 Camellia sinensis var. sinensis HOM05D011555 ORTHO05D013920 2.5e-100 369.4 283 63.3
Rhsim06G0204000 Rhododendron simsii HOM05D011555 ORTHO05D013920 2.3e-98 362.8 280 64.6
Potri.001G373900 Populus trichocarpa HOM05D011555 ORTHO05D013920 2.1e-83 313.2 277 56.7
Atru.chr2.2347 Acer truncatum HOM05D011555 ORTHO05D013920 9.0e-74 281.2 272 50.4
Lj1P836T37 Lonicera japonica HOM05D011555 ORTHO05D013920 1.2e-70 270.8 282 48.9
QL08p023123 Quercus lobata HOM05D011555 ORTHO05D013920 5.1e-69 265.4 265 52.5
Sabra16G0246300 Salix brachista HOM05D011555 ORTHO05D013920 1.2e-65 254.2 243 53.9
Actinidia12547 Actinidia chinensis HOM05D011555 ORTHO05D013920 8.2e-51 204.9 149 67.8
DCAR_013132 Daucus carota HOM05D011555 ORTHO05D013920 1.6e-46 190.7 176 51.7
DCAR_017115 Daucus carota HOM05D011555 ORTHO05D013920 5.3e-42 175.6 171 50.3
DCAR_013133 Daucus carota HOM05D011555 ORTHO05D013920 1.1e-39 167.9 184 46.2
DCAR_018010 Daucus carota HOM05D011555 ORTHO05D013920 2.6e-28 130.2 115 51.3
TAR624G0446 Trochodendron aralioides HOM05D010647 ORTHO05D012576 3.5e-25 119.8 268 33.2
Aqoxy6G00702 Aquilegia oxysepala HOM05D010647 ORTHO05D012576 2.5e-15 87.0 276 29.7
Aqoxy2G04051 Aquilegia oxysepala HOM05D001705 ORTHO05D002725 3.2e-15 86.7 287 28.2
THA.LOC104806991 Tarenaya hassleriana HOM05D002077 ORTHO05D000818 6.3e-11 72.4 272 26.1
AUR62036095 Chenopodium quinoa HOM05D010647 ORTHO05D012576 5.4e-10 69.3 267 24.3
AUR62014304 Chenopodium quinoa HOM05D010647 ORTHO05D012576 3.5e-09 66.6 278 25.9
QL09p041417 Quercus lobata HOM05D002077 ORTHO05D000818 3.8e-08 63.2 292 25.7
TPR.G14327 Trifolium pratense HOM05D002077 ORTHO05D000818 1.1e-07 61.6 230 27.4
Carub.0003s0214 Capsella rubella HOM05D002077 ORTHO05D000818 1.9e-07 60.8 298 23.8
Medtr1g100697 Medicago truncatula HOM05D002077 ORTHO05D000818 2.5e-07 60.5 233 27.5
THA.LOC104814386 Tarenaya hassleriana HOM05D002077 ORTHO05D000818 2.5e-07 60.5 279 24.7
AL6G46110 Arabidopsis lyrata HOM05D002077 ORTHO05D000818 5.6e-07 59.3 299 25.4
Lalb_Chr06g0161071 Lupinus albus HOM05D002077 ORTHO05D000818 5.6e-07 59.3 300 24.0
Medtr1g100707 Medicago truncatula HOM05D002077 ORTHO05D000818 7.3e-07 58.9 282 25.5
SalBow2G3420 Salvia bowleyana HOM05D002077 ORTHO05D000818 9.5e-07 58.5 287 24.7
Ca_10779_v3 Cicer arietinum L. HOM05D002077 ORTHO05D000818 1.2e-06 58.2 230 26.5
arahy.Tifrunner.gnm1.ann1.KCRD8X Arachis hypogaea HOM05D002077 ORTHO05D000818 2.1e-06 57.4 233 25.3
Rhsim03G0179600 Rhododendron simsii HOM05D002077 ORTHO05D000818 4.7e-06 56.2 280 23.9
arahy.Tifrunner.gnm1.ann1.6H6H67 Arachis hypogaea HOM05D002077 ORTHO05D000818 8.0e-06 55.5 233 25.8
C04p53730 Brassica napus HOM05D002077 ORTHO05D000818 8.0e-06 55.5 244 24.6


User provided reference genes

Program Settings