Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0017101 Camellia sinensis var. sinensis HOM05D011882 ORTHO05D011057 2.4e-184 648.7 321 100.0
CSS0029903 Camellia sinensis var. sinensis HOM05D011882 ORTHO05D011057 9.7e-109 397.5 359 60.4
CSS0018658 Camellia sinensis var. sinensis HOM05D011882 ORTHO05D011057 8.2e-100 367.9 354 59.9
CSS0025679 Camellia sinensis var. sinensis HOM05D011882 ORTHO05D011057 4.1e-99 365.5 328 61.6
CSS0042344 Camellia sinensis var. sinensis HOM05D011882 ORTHO05D011057 1.3e-97 360.5 341 57.5
CSS0024781 Camellia sinensis var. sinensis HOM05D011882 ORTHO05D011057 2.2e-28 130.6 197 37.1
CSS0000959 Camellia sinensis var. sinensis HOM05D011882 ORTHO05D011057 2.4e-22 110.5 80 67.5
CSS0016458 Camellia sinensis var. sinensis HOM05D011882 ORTHO05D011057 3.8e-20 103.2 117 47.9
CSS0012554 Camellia sinensis var. sinensis HOM05D012713 ORTHO05D011057 1.2e-18 98.2 228 29.8
CSS0047350 Camellia sinensis var. sinensis HOM05D011882 ORTHO05D011057 6.0e-18 95.9 80 57.5
CSS0010468 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D011057 6.9e-14 82.4 305 29.2
CSS0043342 Camellia sinensis var. sinensis HOM05D012713 ORTHO05D011057 9.0e-14 82.0 69 49.3
Actinidia07483 Actinidia chinensis HOM05D011882 ORTHO05D011057 2.0e-13 80.9 84 48.8
CSS0023562 Camellia sinensis var. sinensis HOM05D000557 ORTHO05D011057 2.6e-13 80.5 111 36.0
Gohir.A06G194460 Gossypium hirsutum HOM05D000003 ORTHO05D015081 1.3e-12 78.2 139 32.4
CSS0001491 Camellia sinensis var. sinensis HOM05D012713 ORTHO05D011057 4.9e-12 76.3 104 43.3
CSS0020104 Camellia sinensis var. sinensis HOM05D012713 ORTHO05D011057 1.4e-11 74.7 219 30.6
Actinidia34556 Actinidia chinensis HOM05D008219 ORTHO05D009356 3.2e-11 73.6 219 25.1
CSS0020841 Camellia sinensis var. sinensis HOM05D012713 ORTHO05D011057 4.2e-11 73.2 101 42.6
CSS0047841 Camellia sinensis var. sinensis HOM05D012713 ORTHO05D011057 5.4e-11 72.8 101 43.6
vmacro16299 Vaccinium macrocarpon HOM05D000629 ORTHO05D000576 1.2e-10 71.6 71 50.7
vmacro11531 Vaccinium macrocarpon HOM05D010265 ORTHO05D009356 2.7e-10 70.5 74 47.3
Gohir.A01G136601 Gossypium hirsutum HOM05D000003 ORTHO05D015081 7.9e-10 68.9 150 30.0
Actinidia11796 Actinidia chinensis HOM05D002604 ORTHO05D009356 2.3e-09 67.4 64 42.2
Actinidia24024 Actinidia chinensis HOM05D023450 ORTHO05D023249 3.0e-09 67.0 72 43.1
vmacro21928 Vaccinium macrocarpon HOM05D000086 ORTHO05D000431 3.0e-09 67.0 182 23.6
vmacro06592 Vaccinium macrocarpon HOM05D000211 ORTHO05D002285 3.9e-09 66.6 224 23.7
Rhsim09G0042800 Rhododendron simsii HOM05D017214 ORTHO05D018100 1.1e-08 65.1 94 33.0
Gohir.A08G172175 Gossypium hirsutum HOM05D000003 ORTHO05D015081 1.5e-08 64.7 138 31.2
vmacro12730 Vaccinium macrocarpon HOM05D002015 ORTHO05D011057 3.3e-08 63.5 59 45.8
vmacro05509 Vaccinium macrocarpon HOM05D002996 ORTHO05D003536 4.3e-08 63.2 80 46.2
Sed0010987 Sechium edule HOM05D003264 ORTHO05D003276 9.6e-08 62.0 80 42.5
vmacro09750 Vaccinium macrocarpon HOM05D005228 ORTHO05D006208 9.6e-08 62.0 71 43.7
vmacro22723 Vaccinium macrocarpon HOM05D005228 ORTHO05D006208 9.6e-08 62.0 71 43.7
Actinidia12169 Actinidia chinensis HOM05D012898 ORTHO05D009356 1.6e-07 61.2 297 21.9
CSS0021702 Camellia sinensis var. sinensis HOM05D012713 ORTHO05D011057 1.6e-07 61.2 97 41.2
PSO541G3918 Papaver somniferum HOM05D003264 ORTHO05D003276 2.1e-07 60.8 80 40.0
PSO781G0066 Papaver somniferum HOM05D003264 ORTHO05D003276 2.1e-07 60.8 80 40.0
Phvul.010G051400 Phaseolus vulgaris HOM05D002777 ORTHO05D001516 2.1e-07 60.8 184 30.4
COL.COLO4_32924 Corchorus olitorius HOM05D011882 ORTHO05D015081 2.8e-07 60.5 219 24.7
vmacro00634 Vaccinium macrocarpon HOM05D000516 ORTHO05D000409 3.7e-07 60.1 92 33.7
vmacro01896 Vaccinium macrocarpon HOM05D008219 ORTHO05D009356 3.7e-07 60.1 134 32.8
Rhsim12G0132400 Rhododendron simsii HOM05D011882 ORTHO05D011057 4.8e-07 59.7 94 34.0
PGSC0003DMG401012560 Solanum tuberosum HOM05D003264 ORTHO05D003276 6.2e-07 59.3 82 37.8
Aa31LG3G17620 Aethionema arabicum HOM05D003264 ORTHO05D003276 8.1e-07 58.9 82 35.4
Rhsim13G0125400 Rhododendron simsii HOM05D008219 ORTHO05D009356 8.1e-07 58.9 138 29.0
Rhsim05G0075400 Rhododendron simsii HOM05D008219 ORTHO05D009356 2.4e-06 57.4 138 28.3
RhsimUnG0101100 Rhododendron simsii HOM05D008219 ORTHO05D009356 2.4e-06 57.4 94 31.9
RhsimUnG0200600 Rhododendron simsii HOM05D008219 ORTHO05D009356 2.4e-06 57.4 138 30.4
Ah.07g198450 Amaranthus hybridus HOM05D008762 ORTHO05D011252 3.1e-06 57.0 68 44.1
Phvul.007G098300 Phaseolus vulgaris HOM05D002777 ORTHO05D001516 3.1e-06 57.0 200 24.0
vmacro21908 Vaccinium macrocarpon HOM05D008219 ORTHO05D009356 3.1e-06 57.0 283 23.3
Duzib170G0053 Durio zibethinus HOM05D037386 ORTHO05D035091 5.3e-06 56.2 79 38.0
Migut.N02899 Erythranthe guttata HOM05D003264 ORTHO05D003276 9.0e-06 55.5 59 47.5
Rhsim10G0189500 Rhododendron simsii HOM05D019536 ORTHO05D011057 9.0e-06 55.5 62 40.3


User provided reference genes

Program Settings