Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0017080 Camellia sinensis var. sinensis HOM05D005712 ORTHO05D007865 7.3e-206 720.3 361 100.0
Actinidia15518 Actinidia chinensis HOM05D005712 ORTHO05D007865 3.0e-151 538.9 361 75.6
Actinidia17068 Actinidia chinensis HOM05D005712 ORTHO05D007865 2.2e-149 532.7 358 75.1
Dinv31977 Davidia involucrata HOM05D005712 ORTHO05D007865 3.5e-147 525.4 361 75.1
Rhsim06G0004000 Rhododendron simsii HOM05D005712 ORTHO05D007865 2.3e-143 512.7 359 74.4
vmacro21777 Vaccinium macrocarpon HOM05D005712 ORTHO05D007865 3.7e-133 478.8 362 69.6
TAR625G0170 Trochodendron aralioides HOM05D005712 ORTHO05D007865 5.7e-126 454.9 344 68.0
GSVIVG01013413001 Vitis vinifera HOM05D005712 ORTHO05D007865 1.3e-122 443.7 339 68.1
TAR381G1666 Trochodendron aralioides HOM05D005712 ORTHO05D007865 5.6e-121 438.3 347 66.6
Manes.05G126100 Manihot esculenta HOM05D005712 ORTHO05D007865 1.6e-120 436.8 358 64.2
Ciclev10001686m.g Citrus clementina HOM05D005712 ORTHO05D007865 1.0e-119 434.1 360 63.6
QL02p015343 Quercus lobata HOM05D005712 ORTHO05D007865 1.8e-119 433.3 360 63.6
Thecc.08G064200 Theobroma cacao HOM05D005712 ORTHO05D007865 8.9e-119 431.0 360 62.5
Nn5g31025 Nelumbo nucifera HOM05D005712 ORTHO05D007865 1.5e-118 430.3 358 63.7
COL.COLO4_07687 Corchorus olitorius HOM05D005712 ORTHO05D007865 2.6e-118 429.5 364 63.5
Duzib116G0237 Durio zibethinus HOM05D005712 ORTHO05D007865 6.4e-117 424.9 361 62.9
Cpa.g.sc26.149 Carica papaya HOM05D005712 ORTHO05D007865 1.6e-115 420.2 363 62.8
CiPaw.07G134700 Carya illinoinensis HOM05D005712 ORTHO05D007865 1.5e-113 413.7 361 63.2
Cfa014126 Carpinus fangiana HOM05D005712 ORTHO05D007865 8.0e-112 407.9 363 61.2
Nitab4.5_0004637g0020 Nicotiana tabacum HOM05D005712 ORTHO05D007865 1.8e-111 406.8 364 59.3
Sed0012463 Sechium edule HOM05D005712 ORTHO05D007865 1.8e-111 406.8 369 58.5
TWI56G0384 Tripterygium wilfordii HOM05D005712 ORTHO05D007865 2.3e-111 406.4 362 63.3
Sabra05G0197900 Salix brachista HOM05D005712 ORTHO05D007865 1.2e-110 404.1 377 58.6
Gohir.D05G181100 Gossypium hirsutum HOM05D005712 ORTHO05D007865 2.6e-110 402.9 361 60.9
Nitab4.5_0000486g0150 Nicotiana tabacum HOM05D005712 ORTHO05D007865 3.4e-110 402.5 361 59.8
Potri.005G255300 Populus trichocarpa HOM05D005712 ORTHO05D007865 3.4e-110 402.5 377 57.8
Hma1.2p1_0699F.1_g205630 Hydrangea macrophylla HOM05D005712 ORTHO05D007865 5.8e-110 401.7 374 60.7
Sopen08g012540 Solanum pennellii HOM05D005712 ORTHO05D007865 9.8e-110 401.0 359 59.6
PGSC0003DMG400000968 Solanum tuberosum HOM05D005712 ORTHO05D007865 9.8e-110 401.0 358 60.1
Atru.chr13.78 Acer truncatum HOM05D005712 ORTHO05D007865 2.2e-109 399.8 266 77.1
CsaV3_4G037540 Cucumis sativus L. HOM05D005712 ORTHO05D007865 2.9e-109 399.4 366 57.9
Gohir.A05G177700 Gossypium hirsutum HOM05D005712 ORTHO05D007865 2.9e-109 399.4 358 60.6
MSTRG.22087 Avicennia marina HOM05D005712 ORTHO05D007865 3.7e-109 399.1 360 59.2
Solyc08g042080.3 Solanum lycopersicum HOM05D005712 ORTHO05D007865 6.4e-109 398.3 359 59.6
CAN.G36.16 Capsicum annuum HOM05D005712 ORTHO05D007865 8.3e-109 397.9 358 60.1
TWI12G0719 Tripterygium wilfordii HOM05D005712 ORTHO05D007865 8.3e-109 397.9 358 61.5
MELO3C017048.2 Cucumis melo HOM05D005712 ORTHO05D007865 1.1e-108 397.5 361 59.6
Hund05083 Selenicereus undatus HOM05D005712 ORTHO05D007865 9.2e-108 394.4 348 60.9
Lj4C5T14 Lonicera japonica HOM05D005712 ORTHO05D007865 2.0e-107 393.3 298 66.1
Haze_22847 Corylus avellana HOM05D005712 ORTHO05D007865 2.7e-107 392.9 407 55.5
Gorai.009G186100 Gossypium raimondii HOM05D005712 ORTHO05D007865 2.3e-106 389.8 316 63.9
ECA238G0561 Erigeron canadensis HOM05D005712 ORTHO05D007865 3.9e-106 389.0 346 59.0
Migut.N02981 Erythranthe guttata HOM05D005712 ORTHO05D007865 6.6e-106 388.3 349 59.6
Potri.002G006300 Populus trichocarpa HOM05D005712 ORTHO05D007865 1.5e-105 387.1 376 57.4
Lsat_1_v5_gn_2_2221 Lactuca sativa HOM05D005712 ORTHO05D007865 4.3e-105 385.6 325 60.9
MBI05_g08201_MAGBIO Magnolia biondii HOM05D005712 ORTHO05D007865 7.3e-105 384.8 324 60.5
ClCG11G018940 Citrullus lanatus HOM05D005712 ORTHO05D007865 1.6e-104 383.6 399 53.6
Oeu004544.1 Olea europaea HOM05D005712 ORTHO05D007865 8.9e-103 377.9 386 54.4
Cc10_g00320 Coffea canephora HOM05D005712 ORTHO05D007865 9.8e-102 374.4 326 61.7
Sc02g0009220 Simmondsia chinensis HOM05D005712 ORTHO05D007865 1.3e-101 374.0 241 74.3
MD06G1005200 Malus domestica HOM05D005712 ORTHO05D007865 2.9e-101 372.9 360 57.8
SalBow6G6969 Salvia bowleyana HOM05D005712 ORTHO05D007865 3.7e-101 372.5 387 54.8
Ah.00g001120 Amaranthus hybridus HOM05D005712 ORTHO05D007865 7.8e-99 364.8 355 57.2
Aqoxy6G01560 Aquilegia oxysepala HOM05D005712 ORTHO05D007865 3.9e-98 362.5 344 57.3
THA.LOC104813742 Tarenaya hassleriana HOM05D005712 ORTHO05D007865 1.1e-97 360.9 347 56.5
PSO541G4707 Papaver somniferum HOM05D005712 ORTHO05D007865 1.5e-97 360.5 356 54.8
SGA_v2.0_scaffold54G19632 Striga asiatica HOM05D005712 ORTHO05D007865 1.5e-97 360.5 346 56.9
Peaxi162Scf00632g00416 Petunia axillaris HOM05D005712 ORTHO05D007865 1.9e-97 360.1 273 68.1
RcHm_v2.0_Chr7g0216471 Rosa chinensis HOM05D005712 ORTHO05D007865 2.5e-97 359.8 361 55.1
Eucgr.F03584 Eucalyptus grandis HOM05D005712 ORTHO05D007865 3.3e-97 359.4 359 54.9
DCAR_022990 Daucus carota HOM05D000190 ORTHO05D007865 4.3e-97 359.0 362 54.7
HanXRQChr06g0185301 Helianthus annuus HOM05D005712 ORTHO05D007865 5.6e-97 358.6 314 59.9
AUR62024105 Chenopodium quinoa HOM05D005712 ORTHO05D007865 9.5e-97 357.8 299 62.2
PSO675G3648 Papaver somniferum HOM05D005712 ORTHO05D007865 6.2e-96 355.1 357 54.1
CANSAT35G0891 Cannabis sativa HOM05D005712 ORTHO05D007865 1.1e-95 354.4 312 61.5
Prupe.5G006400 Prunus persica HOM05D005712 ORTHO05D007865 3.1e-95 352.8 291 63.6
EL10Ac1g01884 Beta vulgaris HOM05D005712 ORTHO05D007865 8.9e-95 351.3 353 55.0
AT1G20830 Arabidopsis thaliana HOM05D005712 ORTHO05D007865 2.0e-94 350.1 350 54.9
Carub.0001s2029 Capsella rubella HOM05D005712 ORTHO05D007865 4.4e-94 349.0 347 54.5
Glyma.06G015100 Glycine max HOM05D005712 ORTHO05D007865 9.9e-94 347.8 231 71.4
Thhalv10007995m.g Eutrema salsugineum HOM05D005712 ORTHO05D007865 2.9e-93 346.3 319 55.8
CDE04G2669 Ceratophyllum demersum HOM05D005712 ORTHO05D007865 6.4e-93 345.1 338 58.0
CARHR021260 Cardamine hirsuta HOM05D005712 ORTHO05D007865 1.4e-92 344.0 345 55.4
BcaC05g25986 Brassica carinata HOM05D005712 ORTHO05D007865 2.7e-91 339.7 370 50.3
C05p19380 Brassica napus HOM05D005712 ORTHO05D007865 2.7e-91 339.7 370 50.3
Phvul.009G007500 Phaseolus vulgaris HOM05D005712 ORTHO05D007865 3.5e-91 339.3 235 69.8
BcaB07g32078 Brassica carinata HOM05D005712 ORTHO05D007865 1.7e-90 337.0 369 49.6
VMungo1309G2122 Vigna mungo HOM05D005712 ORTHO05D007865 1.7e-90 337.0 220 74.1
BcaB03g12849 Brassica carinata HOM05D005712 ORTHO05D007865 2.3e-90 336.7 335 53.4
Aa31LG7G4990 Aethionema arabicum HOM05D005712 ORTHO05D007865 3.0e-90 336.3 363 52.6
Sp1g18530 Schrenkiella parvula HOM05D005712 ORTHO05D007865 3.0e-90 336.3 242 67.8
arahy.Tifrunner.gnm1.ann1.CTTM8W Arachis hypogaea HOM05D005712 ORTHO05D007865 3.9e-90 335.9 255 66.3
BolC5t30641H Brassica oleracea HOM05D005712 ORTHO05D007865 3.9e-90 335.9 371 50.1
Lj1g0001697 Lotus japonicus HOM05D005712 ORTHO05D007865 3.9e-90 335.9 260 66.2
Glyma.04G015100 Glycine max HOM05D005712 ORTHO05D007865 2.5e-89 333.2 231 70.6
FAN18G0352 Fragaria x ananassa HOM05D005712 ORTHO05D007865 3.3e-89 332.8 338 54.7
AUR62035160 Chenopodium quinoa HOM05D005712 ORTHO05D007865 7.3e-89 331.6 359 52.4
BraA06t24791Z Brassica rapa HOM05D005712 ORTHO05D007865 1.6e-88 330.5 368 49.5
Lalb_Chr23g0265571 Lupinus albus HOM05D005712 ORTHO05D007865 1.6e-88 330.5 289 59.5
FAN13G2028 Fragaria x ananassa HOM05D005712 ORTHO05D007865 2.1e-88 330.1 338 54.4
FAN08G0897 Fragaria x ananassa HOM05D005712 ORTHO05D007865 6.2e-88 328.6 342 53.8
A06p16820 Brassica napus HOM05D005712 ORTHO05D007865 3.1e-87 326.2 352 49.7
Ca_15390_v3 Cicer arietinum L. HOM05D005712 ORTHO05D007865 2.6e-86 323.2 265 62.6
RcHm_v2.0_Chr4g0410601 Rosa chinensis HOM05D005712 ORTHO05D007865 3.4e-86 322.8 260 64.6
FvH4_5g25940 Fragaria vesca HOM05D005712 ORTHO05D007865 5.8e-86 322.0 288 58.7
AL1G33850 Arabidopsis lyrata HOM05D005712 ORTHO05D007865 1.3e-85 320.9 234 67.9
FAN04G3045 Fragaria x ananassa HOM05D005712 ORTHO05D007865 1.3e-85 320.9 353 51.8
Medtr3g116050 Medicago truncatula HOM05D005712 ORTHO05D007865 1.7e-85 320.5 257 63.0
Hma1.2p1_0699F.1_g205640 Hydrangea macrophylla HOM05D005712 ORTHO05D007865 7.1e-84 315.1 191 79.6
TPR.G38133 Trifolium pratense HOM05D005712 ORTHO05D007865 2.7e-83 313.2 259 61.8
ATR0807G100 Amborella trichopoda HOM05D005712 ORTHO05D007865 8.7e-82 308.1 318 55.3
arahy.Tifrunner.gnm1.ann1.16JRKN Arachis hypogaea HOM05D005712 ORTHO05D007865 3.3e-81 306.2 193 75.1
Ca_29628_v3 Cicer arietinum L. HOM05D005712 ORTHO05D007865 1.6e-80 303.9 222 68.5
unitig_22.g5745 Utricularia gibba HOM05D005712 ORTHO05D007865 2.9e-77 293.1 231 65.4
Psat5g008680 Pisum sativum HOM05D005712 ORTHO05D007865 5.6e-73 278.9 187 70.6
HPP92_022548 Vanilla planifolia HOM05D005712 ORTHO05D007865 7.6e-70 268.5 244 57.4
Zm00001eb428100 Zea mays HOM05D005712 ORTHO05D007865 2.1e-67 260.4 262 50.4
Zm00001eb072780 Zea mays HOM05D005712 ORTHO05D007865 6.0e-67 258.8 247 51.8
SEGI_27803 Sequoiadendron giganteum HOM05D005712 ORTHO05D007865 5.6e-65 252.3 212 55.7
Os04g0584900 Oryza sativa ssp. japonica HOM05D005712 ORTHO05D007865 9.6e-65 251.5 211 54.5
Cpa.g.sc26.148 Carica papaya HOM05D005712 ORTHO05D007865 1.4e-63 247.7 153 79.7
Oeu019899.1 Olea europaea HOM05D005712 ORTHO05D007865 2.2e-53 213.8 121 81.0
SMO276G0054 Selaginella moellendorffii HOM05D005712 ORTHO05D007865 2.2e-53 213.8 201 54.2
Mapoly0022s0159 Marchantia polymorpha HOM05D005712 ORTHO05D007865 7.2e-52 208.8 256 44.1
AagrBONN_evm.TU.Sc2ySwM_117.1031 Anthoceros agrestis HOM05D005712 ORTHO05D007865 1.3e-50 204.5 173 56.6
Pp3c9_6030 Physcomitrium patens HOM05D005712 ORTHO05D007865 4.3e-49 199.5 187 53.5
Duzib093G1432 Durio zibethinus HOM05D005712 ORTHO05D007865 2.8e-48 196.8 103 88.3
Pp3c15_5620 Physcomitrium patens HOM05D005712 ORTHO05D007865 8.2e-48 195.3 187 51.3
Cpa.g.c30366.3 Carica papaya HOM05D005712 ORTHO05D007865 5.9e-30 136.0 79 75.9
Cpa.g.c44851 Carica papaya HOM05D005712 ORTHO05D007865 5.9e-30 136.0 69 88.4
Oeu019902.1 Olea europaea HOM05D005712 ORTHO05D007865 2.3e-26 124.0 185 43.2
A07p15460 Brassica napus HOM05D005712 ORTHO05D007865 5.4e-15 86.3 58 67.2
TAR188G0003 Trochodendron aralioides HOM05D005712 ORTHO05D007865 1.0e-13 82.0 110 45.5
BolC8t49668H Brassica oleracea HOM05D005712 ORTHO05D032168 2.2e-08 64.3 133 29.3
BcaB03g14422 Brassica carinata HOM05D005712 ORTHO05D014368 1.4e-07 61.6 50 60.0
Cpa.g.c30633.1 Carica papaya HOM05D005712 ORTHO05D120172 7.0e-07 59.3 56 57.1


User provided reference genes

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