Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0016980 Camellia sinensis var. sinensis HOM05D000513 ORTHO05D111289 1.9e-69 265.8 138 100.0
CSS0041358 Camellia sinensis var. sinensis HOM05D000513 ORTHO05D005338 3.6e-60 235.0 136 89.7
Dinv33768 Davidia involucrata HOM05D000513 ORTHO05D005338 4.2e-29 131.7 142 52.8
CSS0032498 Camellia sinensis var. sinensis HOM05D000513 ORTHO05D005338 3.2e-24 115.5 122 53.3
CSS0035890 Camellia sinensis var. sinensis HOM05D000513 ORTHO05D005338 3.2e-24 115.5 122 53.3
vmacro18187 Vaccinium macrocarpon HOM05D000513 ORTHO05D005338 1.3e-22 110.2 122 53.3
Haze_14520 Corylus avellana HOM05D000513 ORTHO05D005338 4.3e-21 105.1 143 46.2
Cfa007565 Carpinus fangiana HOM05D000513 ORTHO05D005338 7.3e-21 104.4 143 46.2
Lj4A110T78 Lonicera japonica HOM05D000513 ORTHO05D005338 6.8e-19 97.8 142 46.5
Actinidia38784 Actinidia chinensis HOM05D000513 ORTHO05D005338 1.7e-17 93.2 122 46.7
Actinidia38766 Actinidia chinensis HOM05D000513 ORTHO05D005338 3.7e-17 92.0 122 45.9
CiPaw.03G025800 Carya illinoinensis HOM05D000513 ORTHO05D005338 2.4e-16 89.4 114 48.2
TAR622G0870 Trochodendron aralioides HOM05D000513 ORTHO05D005338 1.7e-14 83.2 131 45.0
Rhsim08G0070300 Rhododendron simsii HOM05D000513 ORTHO05D005338 5.0e-14 81.6 123 43.9
MD09G1052000 Malus domestica HOM05D000513 ORTHO05D005338 6.6e-14 81.3 128 44.5
CiPaw.04G016900 Carya illinoinensis HOM05D000513 ORTHO05D005338 1.5e-13 80.1 142 40.8
Prupe.3G266700 Prunus persica HOM05D000513 ORTHO05D005338 9.5e-13 77.4 128 41.4
TAR374G1602 Trochodendron aralioides HOM05D000513 ORTHO05D005338 3.6e-12 75.5 132 44.7
GSVIVG01011429001 Vitis vinifera HOM05D000513 ORTHO05D005338 2.3e-11 72.8 123 42.3
Oeu027856.1 Olea europaea HOM05D000513 ORTHO05D005338 4.0e-11 72.0 140 36.4
Oeu027855.1 Olea europaea HOM05D000513 ORTHO05D005338 6.8e-11 71.2 140 36.4
MD00G1130900 Malus domestica HOM05D000513 ORTHO05D005338 2.6e-10 69.3 128 40.6
FAN09G0920 Fragaria x ananassa HOM05D000513 ORTHO05D005338 1.7e-09 66.6 129 40.3
Migut.H00928 Erythranthe guttata HOM05D000513 ORTHO05D005338 2.2e-09 66.2 140 35.0
FAN02G2319 Fragaria x ananassa HOM05D000513 ORTHO05D005338 2.2e-09 66.2 127 38.6
Nitab4.5_0000564g0020 Nicotiana tabacum HOM05D000513 ORTHO05D005338 2.9e-09 65.9 129 36.4
Cc07_g03430 Coffea canephora HOM05D000513 ORTHO05D005338 4.9e-09 65.1 114 36.0
QL02p082359 Quercus lobata HOM05D000513 ORTHO05D005338 6.4e-09 64.7 130 40.8
RcHm_v2.0_Chr2g0168331 Rosa chinensis HOM05D000513 ORTHO05D005338 8.3e-09 64.3 142 38.0
FvH4_6g48410 Fragaria vesca HOM05D000513 ORTHO05D005338 1.4e-08 63.5 129 39.5
Nitab4.5_0002980g0050 Nicotiana tabacum HOM05D000513 ORTHO05D005338 1.4e-08 63.5 128 35.9
AUR62034405 Chenopodium quinoa HOM05D000513 ORTHO05D005338 1.9e-08 63.2 130 38.5
Solyc02g088000.3 Solanum lycopersicum HOM05D000513 ORTHO05D005338 4.1e-08 62.0 129 33.3
PGSC0003DMG400001328 Solanum tuberosum HOM05D000513 ORTHO05D005338 4.1e-08 62.0 129 33.3
TWI32G0103 Tripterygium wilfordii HOM05D000513 ORTHO05D005338 5.4e-08 61.6 143 38.5
FAN14G5629 Fragaria x ananassa HOM05D000513 ORTHO05D005338 7.1e-08 61.2 129 38.8
Sopen02g032740 Solanum pennellii HOM05D000513 ORTHO05D005338 7.1e-08 61.2 129 33.3
SalBow1G3534 Salvia bowleyana HOM05D000513 ORTHO05D005338 9.2e-08 60.8 115 39.1
SalBow1G6141 Salvia bowleyana HOM05D000513 ORTHO05D005338 9.2e-08 60.8 115 39.1
MSTRG.3241 Avicennia marina HOM05D000513 ORTHO05D005338 2.1e-07 59.7 139 33.1
EL10Ac2g02984 Beta vulgaris HOM05D000513 ORTHO05D005338 2.1e-07 59.7 144 32.6
AUR62039808 Chenopodium quinoa HOM05D000513 ORTHO05D005338 2.1e-07 59.7 130 36.9
Cpa.g.sc14.92 Carica papaya HOM05D000513 ORTHO05D038541 4.6e-07 58.5 128 39.1
MBI02_g15396_MAGBIO Magnolia biondii HOM05D000513 ORTHO05D005338 6.0e-07 58.2 129 38.8
Nn3g17255 Nelumbo nucifera HOM05D000513 ORTHO05D005338 1.0e-06 57.4 123 35.8
Aqoxy3G03405 Aquilegia oxysepala HOM05D000513 ORTHO05D005338 1.3e-06 57.0 128 37.5
Ah.12g059870 Amaranthus hybridus HOM05D000513 ORTHO05D005338 3.9e-06 55.5 141 35.5
CAN.G206.155 Capsicum annuum HOM05D000513 ORTHO05D005338 6.6e-06 54.7 114 34.2
Sc10g0003570 Simmondsia chinensis HOM05D000513 ORTHO05D005338 8.6e-06 54.3 82 41.5


User provided reference genes

Program Settings