Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0016918 Camellia sinensis var. sinensis HOM05D007019 ORTHO05D008398 2.1e-264 915.2 496 100.0
CSS0023374 Camellia sinensis var. sinensis HOM05D007019 ORTHO05D008398 2.1e-264 915.2 496 100.0
Actinidia14141 Actinidia chinensis HOM05D007019 ORTHO05D008398 1.0e-210 736.9 497 80.5
Rhsim02G0217600 Rhododendron simsii HOM05D007019 ORTHO05D008398 1.6e-198 696.4 498 75.5
Cfa013011 Carpinus fangiana HOM05D007019 ORTHO05D008398 8.0e-195 684.1 500 74.4
Hma1.2p1_0737F.1_g210790 Hydrangea macrophylla HOM05D007019 ORTHO05D008398 7.5e-193 677.6 501 74.5
Gorai.009G064200 Gossypium raimondii HOM05D007019 ORTHO05D008398 9.1e-191 670.6 499 73.9
Manes.16G132200 Manihot esculenta HOM05D007019 ORTHO05D008398 3.5e-190 668.7 497 72.2
CiPaw.07G232900 Carya illinoinensis HOM05D007019 ORTHO05D008398 1.7e-189 666.4 497 70.8
Duzib168G1437 Durio zibethinus HOM05D007019 ORTHO05D008398 8.5e-189 664.1 502 73.3
Thecc.09G013400 Theobroma cacao HOM05D007019 ORTHO05D008398 2.5e-188 662.5 500 72.6
Cc00_g05220 Coffea canephora HOM05D007019 ORTHO05D008398 5.5e-188 661.4 495 73.3
Atru.chr7.2574 Acer truncatum HOM05D007019 ORTHO05D008398 2.1e-187 659.4 498 71.5
Lj7A737G40 Lonicera japonica HOM05D007019 ORTHO05D008398 3.6e-187 658.7 510 69.0
QL02p018053 Quercus lobata HOM05D007019 ORTHO05D008398 1.8e-186 656.4 496 72.6
Prupe.1G396900 Prunus persica HOM05D007019 ORTHO05D008398 4.0e-186 655.2 500 71.0
Eucgr.C04032 Eucalyptus grandis HOM05D007019 ORTHO05D008398 1.2e-185 653.7 495 70.7
Gohir.D05G063200 Gossypium hirsutum HOM05D007019 ORTHO05D008398 7.5e-185 651.0 499 72.7
COL.COLO4_18972 Corchorus olitorius HOM05D007019 ORTHO05D008398 1.7e-184 649.8 501 72.5
CANSAT25G0065 Cannabis sativa HOM05D007019 ORTHO05D008398 2.4e-183 646.0 497 68.6
MSTRG.1627 Avicennia marina HOM05D007019 ORTHO05D008398 1.2e-182 643.7 499 71.1
TWI32G0429 Tripterygium wilfordii HOM05D007019 ORTHO05D008398 2.7e-182 642.5 496 67.9
Gohir.A05G061000 Gossypium hirsutum HOM05D007019 ORTHO05D008398 1.7e-181 639.8 499 71.5
Lj6g0025581 Lotus japonicus HOM05D007019 ORTHO05D008398 3.8e-181 638.6 498 68.7
DCAR_003030 Daucus carota HOM05D007019 ORTHO05D008398 5.6e-180 634.8 496 67.3
FvH4_2g41350 Fragaria vesca HOM05D007019 ORTHO05D008398 8.0e-179 630.9 496 67.9
Potri.018G016200 Populus trichocarpa HOM05D007019 ORTHO05D008398 6.8e-178 627.9 497 67.0
PGR044G2245 Punica granatum HOM05D007019 ORTHO05D008398 2.9e-176 622.5 501 68.1
Oeu021907.1 Olea europaea HOM05D007019 ORTHO05D008398 3.7e-176 622.1 498 67.9
Nn6g33490 Nelumbo nucifera HOM05D007019 ORTHO05D008398 1.4e-175 620.2 513 68.0
arahy.Tifrunner.gnm1.ann1.MG10WM Arachis hypogaea HOM05D007019 ORTHO05D008398 5.4e-175 618.2 496 66.1
arahy.Tifrunner.gnm1.ann1.SS16UG Arachis hypogaea HOM05D007019 ORTHO05D008398 5.4e-175 618.2 496 65.7
ClCG08G013800 Citrullus lanatus HOM05D007019 ORTHO05D008398 2.0e-174 616.3 499 69.7
Ciclev10008089m.g Citrus clementina HOM05D007019 ORTHO05D008398 1.3e-173 613.6 498 68.3
RcHm_v2.0_Chr6g0299181 Rosa chinensis HOM05D007019 ORTHO05D008398 1.7e-173 613.2 497 67.2
MELO3C011312.2 Cucumis melo HOM05D007019 ORTHO05D008398 3.0e-173 612.5 501 69.3
Lalb_Chr15g0081591 Lupinus albus HOM05D007019 ORTHO05D008398 1.5e-172 610.1 497 66.6
Psat5g174160 Pisum sativum HOM05D007019 ORTHO05D008398 4.3e-172 608.6 498 64.9
Glyma.18G091000 Glycine max HOM05D007019 ORTHO05D008398 2.1e-171 606.3 497 66.6
PGSC0003DMG400014784 Solanum tuberosum HOM05D007019 ORTHO05D008398 4.7e-171 605.1 497 65.6
CsaV3_2G032590 Cucumis sativus L. HOM05D007019 ORTHO05D008398 3.1e-170 602.4 499 68.1
HanXRQChr03g0084841 Helianthus annuus HOM05D007019 ORTHO05D008398 4.0e-170 602.1 521 64.3
Glyma.08G321000 Glycine max HOM05D007019 ORTHO05D008398 6.8e-170 601.3 499 67.3
FAN27G2994 Fragaria x ananassa HOM05D007019 ORTHO05D008398 1.7e-168 596.7 488 66.4
Migut.E01445 Erythranthe guttata HOM05D007019 ORTHO05D008398 4.9e-168 595.1 500 63.6
Aqoxy7G03288 Aquilegia oxysepala HOM05D007019 ORTHO05D008398 1.9e-167 593.2 499 63.1
Medtr3g053700 Medicago truncatula HOM05D007019 ORTHO05D008398 4.1e-167 592.0 496 63.9
MBI14_g16432_MAGBIO Magnolia biondii HOM05D007019 ORTHO05D008398 5.4e-167 591.7 505 64.0
unitig_46.g18223 Utricularia gibba HOM05D007019 ORTHO05D008398 7.0e-167 591.3 499 63.9
Solyc08g068820.3 Solanum lycopersicum HOM05D007019 ORTHO05D008398 9.2e-167 590.9 497 62.8
VMungo0540G1233 Vigna mungo HOM05D007019 ORTHO05D008398 3.0e-165 585.9 499 67.5
Sed0002524 Sechium edule HOM05D007019 ORTHO05D008398 9.5e-164 580.9 505 64.0
CAN.G273.24 Capsicum annuum HOM05D007019 ORTHO05D008398 1.8e-162 576.6 499 64.1
Cpa.g.sc148.46 Carica papaya HOM05D007019 ORTHO05D008398 5.2e-162 575.1 500 65.2
Sabra18G0019700 Salix brachista HOM05D007019 ORTHO05D008398 1.2e-161 573.9 526 60.6
ECA240G4302 Erigeron canadensis HOM05D007019 ORTHO05D008398 1.5e-161 573.5 517 63.4
TPR.G32253 Trifolium pratense HOM05D007019 ORTHO05D008398 5.8e-161 571.6 499 63.1
Ca_26389_v3 Cicer arietinum L. HOM05D007019 ORTHO05D008398 1.7e-160 570.1 497 64.4
Phvul.006G047900 Phaseolus vulgaris HOM05D007019 ORTHO05D008398 3.7e-160 568.9 499 63.9
FAN15G0718 Fragaria x ananassa HOM05D007019 ORTHO05D008398 4.6e-158 562.0 515 61.9
Hund25606 Selenicereus undatus HOM05D007019 ORTHO05D008398 2.3e-157 559.7 521 61.2
Sc23g0006120 Simmondsia chinensis HOM05D007019 ORTHO05D008398 2.5e-156 556.2 517 64.2
SGA_v2.0_scaffold169G38600 Striga asiatica HOM05D007019 ORTHO05D008398 1.4e-154 550.4 511 61.1
Lsat_1_v5_gn_6_78060 Lactuca sativa HOM05D007019 ORTHO05D008398 4.4e-153 545.4 504 60.1
PSO731G0070 Papaver somniferum HOM05D007019 ORTHO05D008398 7.6e-153 544.7 506 59.3
ATR0580G102 Amborella trichopoda HOM05D007019 ORTHO05D008398 4.9e-152 542.0 514 58.4
Nitab4.5_0000406g0110 Nicotiana tabacum HOM05D007019 ORTHO05D008398 4.9e-152 542.0 497 61.2
PSO210G0129 Papaver somniferum HOM05D007019 ORTHO05D008398 3.5e-150 535.8 512 58.0
EL10Ac2g02454 Beta vulgaris HOM05D007019 ORTHO05D008398 5.1e-149 531.9 550 56.4
CDE04G0815 Ceratophyllum demersum HOM05D007019 ORTHO05D008398 1.1e-148 530.8 511 56.4
Aa31LG7G11570 Aethionema arabicum HOM05D007019 ORTHO05D008398 3.3e-148 529.3 512 60.4
vmacro11274 Vaccinium macrocarpon HOM05D007019 ORTHO05D008398 4.3e-148 528.9 495 62.0
THA.LOC104819948 Tarenaya hassleriana HOM05D007019 ORTHO05D008398 5.8e-145 518.5 517 56.7
Thhalv10000137m.g Eutrema salsugineum HOM05D007019 ORTHO05D008398 6.4e-144 515.0 510 58.2
Sp4g03850 Schrenkiella parvula HOM05D007019 ORTHO05D008398 4.2e-143 512.3 509 56.4
Carub.0004s0445 Capsella rubella HOM05D007019 ORTHO05D008398 9.3e-143 511.1 511 56.0
HPP92_010745 Vanilla planifolia HOM05D007019 ORTHO05D008398 1.6e-142 510.4 508 58.9
Zm00001eb257650 Zea mays HOM05D007019 ORTHO05D008398 1.7e-141 506.9 500 56.2
Nitab4.5_0012106g0030 Nicotiana tabacum HOM05D007019 ORTHO05D008398 3.9e-141 505.8 499 58.1
AT2G24830 Arabidopsis thaliana HOM05D007019 ORTHO05D008398 1.5e-140 503.8 513 56.5
Sopen08g022560 Solanum pennellii HOM05D007019 ORTHO05D008398 1.6e-139 500.4 405 63.0
AUR62032443 Chenopodium quinoa HOM05D007019 ORTHO05D008398 6.2e-139 498.4 525 56.4
CARHR294580 Cardamine hirsuta HOM05D007019 ORTHO05D008398 5.3e-138 495.4 514 55.4
AUR62024776 Chenopodium quinoa HOM05D007019 ORTHO05D008398 1.7e-136 490.3 545 54.1
A09p56090 Brassica napus HOM05D007019 ORTHO05D008398 2.4e-135 486.5 508 56.7
AL4G15870 Arabidopsis lyrata HOM05D007019 ORTHO05D008398 1.2e-134 484.2 508 56.3
BraA09t41004Z Brassica rapa HOM05D007019 ORTHO05D008398 1.6e-134 483.8 509 55.6
A09p56030 Brassica napus HOM05D007019 ORTHO05D008398 3.5e-134 482.6 506 55.5
C08p39020 Brassica napus HOM05D007019 ORTHO05D008398 3.3e-132 476.1 509 56.0
BolC8t51475H Brassica oleracea HOM05D007019 ORTHO05D008398 9.6e-132 474.6 509 55.8
Dinv03401 Davidia involucrata HOM05D007019 ORTHO05D008398 6.9e-130 468.4 364 72.5
TAR636G0280 Trochodendron aralioides HOM05D007019 ORTHO05D008398 2.0e-129 466.8 345 69.0
MD08G1051900 Malus domestica HOM05D007019 ORTHO05D008398 9.9e-129 464.5 359 73.5
BcaC07g40903 Brassica carinata HOM05D007019 ORTHO05D008398 2.5e-124 449.9 499 54.3
SEGI_04420 Sequoiadendron giganteum HOM05D007019 ORTHO05D008398 3.7e-123 446.0 518 51.2
Hma1.2p1_0737F.1_g210800 Hydrangea macrophylla HOM05D007019 ORTHO05D008398 7.6e-121 438.3 331 74.6
Mapoly0067s0020 Marchantia polymorpha HOM05D007019 ORTHO05D008398 9.4e-103 378.3 513 43.3
Pp3c21_5730 Physcomitrium patens HOM05D007019 ORTHO05D008398 4.4e-100 369.4 515 43.5
Dinv10229 Davidia involucrata HOM05D007019 ORTHO05D008398 3.9e-93 346.3 353 59.8
SMO116G0382 Selaginella moellendorffii HOM05D007019 ORTHO05D008398 5.7e-92 342.4 498 44.0
SHI21092 Sapria himalayana HOM05D007019 ORTHO05D008398 6.5e-88 328.9 741 34.1
GSVIVG01036005001 Vitis vinifera HOM05D007019 ORTHO05D008398 1.1e-74 285.0 189 74.1
AagrBONN_evm.TU.Sc2ySwM_117.1463 Anthoceros agrestis HOM05D007019 ORTHO05D008398 2.9e-64 250.4 358 46.4
CBR_g30106 Chara braunii HOM05D007019 ORTHO05D008398 2.0e-52 211.1 562 32.4
SalBow6G1623 Salvia bowleyana HOM05D007019 ORTHO05D008398 6.2e-46 189.5 189 55.0
Peaxi162Scf01419g00115 Petunia axillaris HOM05D007019 ORTHO05D008398 4.1e-42 176.8 142 62.7
SMO116G0105 Selaginella moellendorffii HOM05D007019 ORTHO05D008398 4.7e-30 136.7 323 37.2
Os02g0793000 Oryza sativa ssp. japonica HOM05D007019 ORTHO05D008398 1.4e-26 125.2 108 54.6
SMO269G0003 Selaginella moellendorffii HOM05D007019 ORTHO05D008398 2.6e-20 104.4 338 32.5
AagrBONN_evm.TU.Sc2ySwM_117.1462 Anthoceros agrestis HOM05D007019 ORTHO05D008398 1.2e-17 95.5 150 40.7
TAR636G2565 Trochodendron aralioides HOM05D007019 ORTHO05D008398 1.9e-07 61.6 43 79.1
Lsat_1_v5_gn_5_90461 Lactuca sativa HOM05D004574 ORTHO05D005612 3.3e-07 60.8 49 57.1
CANSAT11G2415 Cannabis sativa HOM05D004574 ORTHO05D005612 7.4e-07 59.7 65 44.6
Nn2g12259 Nelumbo nucifera HOM05D004574 ORTHO05D005612 7.4e-07 59.7 71 43.7
Actinidia21909 Actinidia chinensis HOM05D004574 ORTHO05D005612 1.3e-06 58.9 65 46.2
Lalb_Chr12g0198521 Lupinus albus HOM05D004574 ORTHO05D005612 2.1e-06 58.2 59 49.2
Actinidia04251 Actinidia chinensis HOM05D004574 ORTHO05D005612 2.8e-06 57.8 79 43.0
arahy.Tifrunner.gnm1.ann1.YXSX85 Arachis hypogaea HOM05D004574 ORTHO05D005612 2.8e-06 57.8 69 44.9
CSS0028433 Camellia sinensis var. sinensis HOM05D004574 ORTHO05D005612 2.8e-06 57.8 86 39.5
ECA234G1322 Erigeron canadensis HOM05D004574 ORTHO05D005612 2.8e-06 57.8 49 53.1
Glyma.17G104500 Glycine max HOM05D004574 ORTHO05D005612 2.8e-06 57.8 59 50.8
Lj9A709T23 Lonicera japonica HOM05D004574 ORTHO05D005612 3.7e-06 57.4 58 46.6
MD02G1012700 Malus domestica HOM05D004574 ORTHO05D005612 3.7e-06 57.4 65 40.0
Potri.018G113600 Populus trichocarpa HOM05D004574 ORTHO05D005612 3.7e-06 57.4 74 41.9
HPP92_005314 Vanilla planifolia HOM05D004574 ORTHO05D005612 3.7e-06 57.4 69 39.1
HPP92_005340 Vanilla planifolia HOM05D004574 ORTHO05D005612 3.7e-06 57.4 69 39.1
arahy.Tifrunner.gnm1.ann1.J06XH2 Arachis hypogaea HOM05D004574 ORTHO05D005612 4.8e-06 57.0 69 43.5
Cc06_g07390 Coffea canephora HOM05D004574 ORTHO05D005612 4.8e-06 57.0 52 50.0
HanXRQChr12g0357011 Helianthus annuus HOM05D004574 ORTHO05D005612 4.8e-06 57.0 59 45.8
MD15G1158500 Malus domestica HOM05D004574 ORTHO05D005612 4.8e-06 57.0 55 47.3
AUR62041455 Chenopodium quinoa HOM05D004574 ORTHO05D005612 6.2e-06 56.6 68 41.2
Lj4g0023014 Lotus japonicus HOM05D004574 ORTHO05D005612 6.2e-06 56.6 70 47.1
Ciclev10007567m.g Citrus clementina HOM05D004574 ORTHO05D005612 8.2e-06 56.2 46 54.3
Zm00001eb028250 Zea mays HOM05D004574 ORTHO05D005612 8.2e-06 56.2 68 41.2


User provided reference genes

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