Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0016911 Camellia sinensis var. sinensis HOM05D000778 ORTHO05D000601 7.1e-93 344.0 179 100.0
CSS0027691 Camellia sinensis var. sinensis HOM05D000778 ORTHO05D000601 7.1e-93 344.0 179 100.0
Dinv17935 Davidia involucrata HOM05D000778 ORTHO05D000601 5.3e-48 194.9 166 66.9
Hma1.2p1_3492F.1_g336400 Hydrangea macrophylla HOM05D000778 ORTHO05D000601 1.6e-36 156.8 167 56.3
CSS0034329 Camellia sinensis var. sinensis HOM05D000778 ORTHO05D000601 1.0e-35 154.1 159 58.5
Rhsim07G0074700 Rhododendron simsii HOM05D000778 ORTHO05D000601 1.0e-35 154.1 160 57.5
CSS0010513 Camellia sinensis var. sinensis HOM05D000778 ORTHO05D000601 6.7e-35 151.4 159 57.2
vmacro13817 Vaccinium macrocarpon HOM05D000778 ORTHO05D000601 1.0e-30 137.5 139 57.6
Actinidia17462 Actinidia chinensis HOM05D000778 ORTHO05D000601 1.5e-29 133.7 163 53.4
Peaxi162Scf00282g00075 Petunia axillaris HOM05D000778 ORTHO05D000601 2.5e-29 132.9 159 50.9
Nitab4.5_0002247g0020 Nicotiana tabacum HOM05D000778 ORTHO05D000601 1.4e-27 127.1 157 51.0
Solyc01g097120.3 Solanum lycopersicum HOM05D000778 ORTHO05D000601 1.1e-26 124.0 142 52.1
Sopen01g040800 Solanum pennellii HOM05D000778 ORTHO05D000601 3.3e-26 122.5 142 52.1
PGSC0003DMG400027517 Solanum tuberosum HOM05D000778 ORTHO05D000601 5.7e-26 121.7 142 51.4
CiPaw.07G068900 Carya illinoinensis HOM05D000778 ORTHO05D000601 8.2e-25 117.9 172 44.8
Haze_04380 Corylus avellana HOM05D000778 ORTHO05D000601 2.2e-22 109.8 173 45.1
QL03p027737 Quercus lobata HOM05D000778 ORTHO05D000601 6.5e-22 108.2 173 45.7
TAR362G1294 Trochodendron aralioides HOM05D000778 ORTHO05D000601 1.5e-21 107.1 192 43.8
CiPaw.08G121800 Carya illinoinensis HOM05D000778 ORTHO05D000601 2.5e-21 106.3 174 45.4
Oeu016448.1 Olea europaea HOM05D000778 ORTHO05D000601 1.6e-20 103.6 164 45.7
Oeu038461.1 Olea europaea HOM05D000778 ORTHO05D000601 1.6e-20 103.6 101 57.4
DCAR_006641 Daucus carota HOM05D000778 ORTHO05D000601 2.7e-20 102.8 151 42.4
Cc02_g30920 Coffea canephora HOM05D000778 ORTHO05D000601 4.7e-20 102.1 165 43.6
GSVIVG01036233001 Vitis vinifera HOM05D000778 ORTHO05D000601 1.0e-19 100.9 164 45.1
Lj5g0016838 Lotus japonicus HOM05D000778 ORTHO05D000601 1.4e-19 100.5 160 45.0
CAN.G134.72 Capsicum annuum HOM05D000778 ORTHO05D000601 2.6e-18 96.3 156 41.7
CANSAT54G1766 Cannabis sativa HOM05D000778 ORTHO05D000601 3.4e-18 95.9 160 44.4
SalBow4G2427 Salvia bowleyana HOM05D000778 ORTHO05D000601 3.4e-18 95.9 164 41.5
Glyma.10G163400 Glycine max HOM05D000778 ORTHO05D000601 5.7e-18 95.1 160 45.0
TWI77G0756 Tripterygium wilfordii HOM05D000778 ORTHO05D000601 5.7e-18 95.1 164 44.5
TWI53G0374 Tripterygium wilfordii HOM05D000778 ORTHO05D000601 9.8e-18 94.4 164 45.1
TWI74G0729 Tripterygium wilfordii HOM05D000778 ORTHO05D000601 1.7e-17 93.6 164 43.9
Nitab4.5_0012146g0020 Nicotiana tabacum HOM05D000778 ORTHO05D000601 2.8e-17 92.8 154 41.6
VMungo0720G1383 Vigna mungo HOM05D000778 ORTHO05D000601 3.7e-17 92.4 160 44.4
TAR636G0879 Trochodendron aralioides HOM05D000778 ORTHO05D000601 1.8e-16 90.1 200 39.5
Potri.013G042800 Populus trichocarpa HOM05D000778 ORTHO05D000601 3.1e-16 89.4 164 42.7
Manes.08G136500 Manihot esculenta HOM05D000778 ORTHO05D000601 2.0e-15 86.7 164 40.9
Phvul.007G188500 Phaseolus vulgaris HOM05D000778 ORTHO05D000601 2.0e-15 86.7 159 42.8
Prupe.6G345500 Prunus persica HOM05D000778 ORTHO05D000601 3.5e-15 85.9 104 51.0
TPR.G6941 Trifolium pratense HOM05D000778 ORTHO05D000601 3.5e-15 85.9 164 42.1
Ca_10037_v3 Cicer arietinum L. HOM05D000778 ORTHO05D000601 4.5e-15 85.5 163 41.7
Oeu014608.1 Olea europaea HOM05D000778 ORTHO05D000601 4.5e-15 85.5 155 39.4
Ciclev10028698m.g Citrus clementina HOM05D000778 ORTHO05D000601 5.9e-15 85.1 160 43.1
DCAR_025324 Daucus carota HOM05D000778 ORTHO05D000601 5.9e-15 85.1 151 45.0
Glyma.20G226000 Glycine max HOM05D000778 ORTHO05D000601 5.9e-15 85.1 160 43.1
TAR633G0617 Trochodendron aralioides HOM05D000778 ORTHO05D000601 2.9e-14 82.8 193 37.8
arahy.Tifrunner.gnm1.ann1.EA9INV Arachis hypogaea HOM05D000778 ORTHO05D000601 1.1e-13 80.9 161 36.6
Medtr7g115310 Medicago truncatula HOM05D005123 ORTHO05D006532 1.1e-13 80.9 156 42.3
Potri.005G055900 Populus trichocarpa HOM05D000778 ORTHO05D000601 2.5e-13 79.7 159 40.9
SalBow4G1089 Salvia bowleyana HOM05D000778 ORTHO05D000601 3.2e-13 79.3 164 37.8
ECA246G4794 Erigeron canadensis HOM05D000778 ORTHO05D000601 5.5e-13 78.6 116 47.4
arahy.Tifrunner.gnm1.ann1.7M06WQ Arachis hypogaea HOM05D000778 ORTHO05D000601 1.6e-12 77.0 161 36.6
Ca_09431_v3 Cicer arietinum L. HOM05D000778 ORTHO05D000601 2.7e-12 76.3 164 40.2
Eucgr.H04316 Eucalyptus grandis HOM05D000778 ORTHO05D000601 2.7e-12 76.3 155 39.4
Duzib177G0114 Durio zibethinus HOM05D000778 ORTHO05D000601 1.0e-11 74.3 110 44.5
Manes.09G151100 Manihot esculenta HOM05D000778 ORTHO05D000601 2.3e-11 73.2 168 41.7
Medtr1g080690 Medicago truncatula HOM05D000778 ORTHO05D000601 2.3e-11 73.2 160 38.1
Thecc.05G280400 Theobroma cacao HOM05D000778 ORTHO05D000601 3.0e-11 72.8 144 41.0
RcHm_v2.0_Chr3g0450511 Rosa chinensis HOM05D000778 ORTHO05D000601 5.2e-11 72.0 162 37.0
Duzib128G1416 Durio zibethinus HOM05D000778 ORTHO05D000601 1.2e-10 70.9 95 47.4
Sed0004657 Sechium edule HOM05D000778 ORTHO05D000601 2.6e-10 69.7 171 34.5
ClCG00G000500 Citrullus lanatus HOM05D000778 ORTHO05D000601 7.5e-10 68.2 172 35.5
FAN09G1711 Fragaria x ananassa HOM05D000778 ORTHO05D000601 7.5e-10 68.2 161 35.4
Cpa.g.sc736.4 Carica papaya HOM05D000778 ORTHO05D000601 9.8e-10 67.8 172 35.5
FAN14G1742 Fragaria x ananassa HOM05D000778 ORTHO05D000601 9.8e-10 67.8 161 36.0
FAN14G5396 Fragaria x ananassa HOM05D000778 ORTHO05D000601 9.8e-10 67.8 161 36.0
PGR004G1927 Punica granatum HOM05D000778 ORTHO05D000601 1.7e-09 67.0 160 39.4
Glyma.03G248000 Glycine max HOM05D000778 ORTHO05D000601 2.8e-09 66.2 165 35.8
ClCG00G001370 Citrullus lanatus HOM05D000778 ORTHO05D000601 3.7e-09 65.9 172 34.9
MD04G1226800 Malus domestica HOM05D000778 ORTHO05D000601 3.7e-09 65.9 89 48.3
FAN05G1731 Fragaria x ananassa HOM05D000778 ORTHO05D000601 4.9e-09 65.5 161 34.2
FAN05G5635 Fragaria x ananassa HOM05D000778 ORTHO05D000601 4.9e-09 65.5 161 34.2
Thecc.04G246400 Theobroma cacao HOM05D000778 ORTHO05D000601 4.9e-09 65.5 190 37.9
FvH4_6g02600 Fragaria vesca HOM05D000778 ORTHO05D000601 6.3e-09 65.1 161 35.4
Sed0011565 Sechium edule HOM05D000778 ORTHO05D000601 1.4e-08 63.9 171 33.9
Manes.03G168600 Manihot esculenta HOM05D000778 ORTHO05D000601 1.8e-08 63.5 190 36.3
FAN02G1645 Fragaria x ananassa HOM05D000778 ORTHO05D000601 2.4e-08 63.2 161 34.2
EL10Ac4g09080 Beta vulgaris HOM05D000778 ORTHO05D000601 3.1e-08 62.8 163 37.4
Aqoxy2G03567 Aquilegia oxysepala HOM05D000778 ORTHO05D000601 5.4e-08 62.0 176 33.0
HanXRQChr05g0158371 Helianthus annuus HOM05D000778 ORTHO05D000601 1.6e-07 60.5 161 32.9
CsaV3_1G045490 Cucumis sativus L. HOM05D000778 ORTHO05D000601 2.0e-07 60.1 174 32.8
THA.LOC104805825 Tarenaya hassleriana HOM05D000778 ORTHO05D000601 2.0e-07 60.1 159 37.1
MELO3C024656.2 Cucumis melo HOM05D000778 ORTHO05D000601 4.5e-07 58.9 174 32.8
Haze_11302 Corylus avellana HOM05D000778 ORTHO05D000601 7.7e-07 58.2 194 35.1
Gorai.004G247600 Gossypium raimondii HOM05D000778 ORTHO05D000601 7.7e-07 58.2 162 31.5
Nn3g19543 Nelumbo nucifera HOM05D000778 ORTHO05D000601 7.7e-07 58.2 194 33.5
Atru.chr2.856 Acer truncatum HOM05D000778 ORTHO05D000601 1.0e-06 57.8 164 34.8
Haze_11304 Corylus avellana HOM05D000778 ORTHO05D000601 1.0e-06 57.8 194 35.1
Gohir.D08G233100 Gossypium hirsutum HOM05D000778 ORTHO05D000601 1.7e-06 57.0 162 30.9
Duzib106G0680 Durio zibethinus HOM05D000778 ORTHO05D000601 2.3e-06 56.6 160 34.4
Sc20g0000460 Simmondsia chinensis HOM05D000778 ORTHO05D000601 2.3e-06 56.6 168 33.3
MELO3C004396.2 Cucumis melo HOM05D000778 ORTHO05D000601 6.6e-06 55.1 80 41.2
CsaV3_2G003950 Cucumis sativus L. HOM05D000778 ORTHO05D000601 6.6e-06 55.1 81 42.0
Sabra13G0039200 Salix brachista HOM05D000778 ORTHO05D000601 6.6e-06 55.1 124 40.3
TPR.G21822 Trifolium pratense HOM05D000778 ORTHO05D000601 6.6e-06 55.1 155 36.1


User provided reference genes

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