Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0016908 Camellia sinensis var. sinensis HOM05D004671 ORTHO05D005638 5.6e-98 360.9 179 100.0
Actinidia03123 Actinidia chinensis HOM05D004671 ORTHO05D005638 4.5e-63 245.0 144 83.3
vmacro21316 Vaccinium macrocarpon HOM05D004671 ORTHO05D005638 1.9e-61 239.6 152 75.0
vmacro09835 Vaccinium macrocarpon HOM05D004671 ORTHO05D005638 8.7e-59 230.7 152 71.7
Dinv24388 Davidia involucrata HOM05D004671 ORTHO05D005638 7.4e-58 227.6 144 76.4
GSVIVG01028933001 Vitis vinifera HOM05D004671 ORTHO05D005638 1.3e-54 216.9 182 62.6
TAR629G1771 Trochodendron aralioides HOM05D004671 ORTHO05D005638 5.5e-53 211.5 183 60.1
Nn3g16880 Nelumbo nucifera HOM05D004671 ORTHO05D005638 3.5e-52 208.8 182 60.4
Lsat_1_v5_gn_3_14041 Lactuca sativa HOM05D004671 ORTHO05D005638 6.1e-52 208.0 136 72.1
CAN.G208.79 Capsicum annuum HOM05D004671 ORTHO05D005638 7.9e-52 207.6 157 63.1
DCAR_015049 Daucus carota HOM05D004671 ORTHO05D005638 1.5e-50 203.4 178 59.6
Cc02_g02840 Coffea canephora HOM05D004671 ORTHO05D005638 2.5e-50 202.6 180 58.3
Nitab4.5_0000080g0100 Nicotiana tabacum HOM05D004671 ORTHO05D005638 3.3e-50 202.2 192 57.3
DCAR_010301 Daucus carota HOM05D004671 ORTHO05D005638 1.3e-49 200.3 178 59.0
Nitab4.5_0001951g0070 Nicotiana tabacum HOM05D004671 ORTHO05D005638 1.6e-49 199.9 155 65.8
ECA233G0868 Erigeron canadensis HOM05D004671 ORTHO05D005638 3.7e-49 198.7 155 61.9
Rhsim09G0198100 Rhododendron simsii HOM05D004671 ORTHO05D005638 8.2e-49 197.6 128 75.8
TWI14G0685 Tripterygium wilfordii HOM05D004671 ORTHO05D005638 2.4e-48 196.1 147 63.9
Lsat_1_v5_gn_8_8441 Lactuca sativa HOM05D004671 ORTHO05D005638 4.1e-48 195.3 137 67.9
HanXRQChr15g0497081 Helianthus annuus HOM05D004671 ORTHO05D005638 7.7e-47 191.0 137 64.2
Cpa.g.sc107.62 Carica papaya HOM05D004671 ORTHO05D005638 1.0e-46 190.7 174 56.3
Atru.chr1.442 Acer truncatum HOM05D004671 ORTHO05D005638 6.5e-46 188.0 149 59.7
HanXRQChr10g0304161 Helianthus annuus HOM05D004671 ORTHO05D005638 2.5e-45 186.0 137 63.5
HanXRQChr06g0163751 Helianthus annuus HOM05D004671 ORTHO05D005638 5.5e-45 184.9 137 62.0
COL.COLO4_14329 Corchorus olitorius HOM05D004671 ORTHO05D005638 7.2e-45 184.5 149 62.4
MSTRG.27109 Avicennia marina HOM05D004671 ORTHO05D005638 9.4e-45 184.1 143 60.8
CANSAT21G1295 Cannabis sativa HOM05D004671 ORTHO05D005638 1.6e-44 183.3 134 67.9
CANSAT21G1725 Cannabis sativa HOM05D004671 ORTHO05D005638 2.1e-44 183.0 134 67.2
Duzib205G1877 Durio zibethinus HOM05D004671 ORTHO05D005638 6.1e-44 181.4 147 60.5
Gohir.D09G042500 Gossypium hirsutum HOM05D004671 ORTHO05D005638 6.1e-44 181.4 143 62.9
Gorai.006G048800 Gossypium raimondii HOM05D004671 ORTHO05D005638 6.1e-44 181.4 143 62.9
Manes.14G025200 Manihot esculenta HOM05D004671 ORTHO05D005638 1.4e-43 180.3 145 61.4
Gohir.A09G041700 Gossypium hirsutum HOM05D004671 ORTHO05D005638 3.0e-43 179.1 140 63.6
Eucgr.K00269 Eucalyptus grandis HOM05D004671 ORTHO05D005638 6.7e-43 177.9 140 60.7
Cfa002753 Carpinus fangiana HOM05D004671 ORTHO05D005638 8.8e-43 177.6 170 54.1
Thecc.03G178300 Theobroma cacao HOM05D004671 ORTHO05D005638 8.8e-43 177.6 143 60.1
Cfa022980 Carpinus fangiana HOM05D004671 ORTHO05D005638 1.5e-42 176.8 159 56.6
ClCG05G008100 Citrullus lanatus HOM05D004671 ORTHO05D005638 4.3e-42 175.3 147 59.2
Sc13g0008790 Simmondsia chinensis HOM05D004671 ORTHO05D005638 5.7e-42 174.9 140 63.6
GSVIVG01017918001 Vitis vinifera HOM05D004671 ORTHO05D005638 9.7e-42 174.1 144 61.1
Potri.015G144900 Populus trichocarpa HOM05D004671 ORTHO05D005638 2.8e-41 172.6 187 49.2
Sabra15G0154400 Salix brachista HOM05D004671 ORTHO05D005638 8.2e-41 171.0 140 57.1
Sc13g0008680 Simmondsia chinensis HOM05D004671 ORTHO05D005638 8.2e-41 171.0 142 62.7
Migut.K00770 Erythranthe guttata HOM05D004671 ORTHO05D005638 1.8e-40 169.9 143 55.9
EL10Ac3g05622 Beta vulgaris HOM05D004671 ORTHO05D005638 2.4e-40 169.5 144 60.4
Aqoxy3G03421 Aquilegia oxysepala HOM05D004671 ORTHO05D005638 3.1e-40 169.1 143 58.7
Ciclev10004721m.g Citrus clementina HOM05D004671 ORTHO05D005638 1.5e-39 166.8 149 53.0
CsaV3_3G017180 Cucumis sativus L. HOM05D004671 ORTHO05D005638 1.5e-39 166.8 136 58.8
Sed0007536 Sechium edule HOM05D004671 ORTHO05D005638 4.5e-39 165.2 136 61.0
Hund04757 Selenicereus undatus HOM05D004671 ORTHO05D005638 1.3e-38 163.7 131 62.6
PSO017G5643 Papaver somniferum HOM05D004671 ORTHO05D005638 1.7e-38 163.3 134 59.7
PGR142G1152 Punica granatum HOM05D004671 ORTHO05D005638 2.9e-38 162.5 147 53.7
AUR62015967 Chenopodium quinoa HOM05D004671 ORTHO05D005638 3.8e-38 162.2 143 60.1
Ca_10754_v3 Cicer arietinum L. HOM05D004671 ORTHO05D005638 3.8e-38 162.2 141 58.2
PSO063G7539 Papaver somniferum HOM05D004671 ORTHO05D005638 3.8e-38 162.2 134 59.7
Haze_25041 Corylus avellana HOM05D004671 ORTHO05D005638 6.5e-38 161.4 202 47.5
SalBow1G5895 Salvia bowleyana HOM05D004671 ORTHO05D005638 8.5e-38 161.0 157 53.5
SGA_v2.0_scaffold60G21057 Striga asiatica HOM05D004671 ORTHO05D005638 1.9e-37 159.8 178 46.6
SalBow1G2445 Salvia bowleyana HOM05D004671 ORTHO05D005638 7.2e-37 157.9 157 52.9
THA.LOC104818634 Tarenaya hassleriana HOM05D004671 ORTHO05D005638 7.2e-37 157.9 142 50.7
Mapoly0133s0004 Marchantia polymorpha HOM05D004671 ORTHO05D005638 9.4e-37 157.5 145 53.1
CDE04G1371 Ceratophyllum demersum HOM05D004671 ORTHO05D005638 2.7e-36 156.0 123 61.0
Phvul.007G071300 Phaseolus vulgaris HOM05D004671 ORTHO05D005638 4.7e-36 155.2 136 58.1
TPR.G27007 Trifolium pratense HOM05D004671 ORTHO05D005638 6.1e-36 154.8 152 54.6
VMungo0720G2100 Vigna mungo HOM05D004671 ORTHO05D005638 6.1e-36 154.8 134 59.0
CiPaw.03G107600 Carya illinoinensis HOM05D004671 ORTHO05D005638 1.0e-35 154.1 160 50.0
Prupe.2G295500 Prunus persica HOM05D004671 ORTHO05D005638 3.0e-35 152.5 142 58.5
Pp3c16_7220 Physcomitrium patens HOM05D004671 ORTHO05D005638 3.9e-35 152.1 147 49.7
Lalb_Chr06g0161161 Lupinus albus HOM05D004671 ORTHO05D005638 5.1e-35 151.8 139 55.4
Ah.13g068640 Amaranthus hybridus HOM05D004671 ORTHO05D005638 8.8e-35 151.0 144 53.5
Glyma.10G234800 Glycine max HOM05D004671 ORTHO05D005638 1.1e-34 150.6 139 54.7
HPP92_020192 Vanilla planifolia HOM05D004671 ORTHO05D005638 1.5e-34 150.2 151 51.0
Glyma.20G157700 Glycine max HOM05D004671 ORTHO05D005638 5.7e-34 148.3 144 52.8
Sc13g0008760 Simmondsia chinensis HOM05D004671 ORTHO05D005638 5.7e-34 148.3 120 63.3
Lj5g0019412 Lotus japonicus HOM05D004671 ORTHO05D005638 7.4e-34 147.9 142 54.9
Psat6g198360 Pisum sativum HOM05D004671 ORTHO05D005638 7.4e-34 147.9 137 54.0
SHI26612 Sapria himalayana HOM05D004671 ORTHO05D005638 7.4e-34 147.9 132 51.5
Glyma.20G159500 Glycine max HOM05D004671 ORTHO05D005638 9.7e-34 147.5 139 54.0
MD07G1271200 Malus domestica HOM05D004671 ORTHO05D005638 3.7e-33 145.6 143 53.8
Peaxi162Scf00848g00015 Petunia axillaris HOM05D004671 ORTHO05D005638 6.3e-33 144.8 141 54.6
AagrBONN_evm.TU.Sc2ySwM_344.423 Anthoceros agrestis HOM05D004671 ORTHO05D005638 1.4e-32 143.7 145 49.0
Medtr1g101100 Medicago truncatula HOM05D004671 ORTHO05D005638 4.1e-32 142.1 152 48.7
Thhalv10010290m.g Eutrema salsugineum HOM05D004671 ORTHO05D005638 5.3e-32 141.7 140 50.7
FAN03G0738 Fragaria x ananassa HOM05D004671 ORTHO05D005638 5.3e-32 141.7 158 44.3
MD01G1202100 Malus domestica HOM05D004671 ORTHO05D005638 7.0e-32 141.4 131 55.0
FAN01G2609 Fragaria x ananassa HOM05D004671 ORTHO05D005638 9.1e-32 141.0 158 44.9
BcaC01g02382 Brassica carinata HOM05D004671 ORTHO05D005638 2.0e-31 139.8 151 47.0
C03p65870 Brassica napus HOM05D004671 ORTHO05D005638 2.0e-31 139.8 151 47.0
BolC3t18845H Brassica oleracea HOM05D004671 ORTHO05D005638 2.0e-31 139.8 151 47.0
Carub.0005s1517 Capsella rubella HOM05D004671 ORTHO05D005638 3.5e-31 139.0 143 50.3
RcHm_v2.0_Chr1g0377571 Rosa chinensis HOM05D004671 ORTHO05D005638 3.5e-31 139.0 144 49.3
FvH4_7g29570 Fragaria vesca HOM05D004671 ORTHO05D005638 4.5e-31 138.7 133 51.1
FAN06G3892 Fragaria x ananassa HOM05D004671 ORTHO05D005638 4.5e-31 138.7 133 51.1
FAN06G5094 Fragaria x ananassa HOM05D004671 ORTHO05D005638 4.5e-31 138.7 133 51.1
arahy.Tifrunner.gnm1.ann1.V0I5I8 Arachis hypogaea HOM05D004671 ORTHO05D005638 5.9e-31 138.3 139 48.9
Os01g0679000 Oryza sativa ssp. japonica HOM05D004671 ORTHO05D005638 5.9e-31 138.3 134 53.7
FAN10G3685 Fragaria x ananassa HOM05D004671 ORTHO05D005638 1.0e-30 137.5 133 50.4
FAN10G4176 Fragaria x ananassa HOM05D004671 ORTHO05D005638 1.0e-30 137.5 133 50.4
AL6G42740 Arabidopsis lyrata HOM05D004671 ORTHO05D005638 1.7e-30 136.7 157 46.5
AUR62021173 Chenopodium quinoa HOM05D004671 ORTHO05D005638 1.7e-30 136.7 107 62.6
AL5G28510 Arabidopsis lyrata HOM05D004671 ORTHO05D005638 3.8e-30 135.6 157 46.5
CAN.G527.1 Capsicum annuum HOM05D004671 ORTHO05D005638 3.8e-30 135.6 116 56.9
Zm00001eb160040 Zea mays HOM05D004671 ORTHO05D005638 3.8e-30 135.6 134 51.5
Aa31LG4G17500 Aethionema arabicum HOM05D004671 ORTHO05D005638 5.0e-30 135.2 141 46.8
RcHm_v2.0_Chr6g0258831 Rosa chinensis HOM05D004671 ORTHO05D005638 1.5e-29 133.7 144 47.2
A06p28000 Brassica napus HOM05D004671 ORTHO05D005638 1.9e-29 133.3 138 48.6
Sp5g13050 Schrenkiella parvula HOM05D004671 ORTHO05D005638 1.9e-29 133.3 138 49.3
BraA06t25741Z Brassica rapa HOM05D004671 ORTHO05D005638 3.2e-29 132.5 138 48.6
Thhalv10003189m.g Eutrema salsugineum HOM05D004671 ORTHO05D005638 4.2e-29 132.1 150 44.7
AT3G49000 Arabidopsis thaliana HOM05D004671 ORTHO05D005638 1.6e-28 130.2 141 46.1
CARHR157820 Cardamine hirsuta HOM05D004671 ORTHO05D005638 1.6e-28 130.2 144 47.2
BcaB02g09572 Brassica carinata HOM05D004671 ORTHO05D005638 3.6e-28 129.0 138 46.4
CBR_g5700 Chara braunii HOM05D004671 ORTHO05D005638 2.3e-27 126.3 144 45.1
ATR0737G144 Amborella trichopoda HOM05D004671 ORTHO05D005638 6.7e-27 124.8 144 45.1
arahy.Tifrunner.gnm1.ann1.U8RPI8 Arachis hypogaea HOM05D004671 ORTHO05D005638 3.3e-26 122.5 192 37.5
Glyma.12G162990 Glycine max HOM05D004671 ORTHO05D005638 4.4e-26 122.1 121 52.9
Carub.0004s0531 Capsella rubella HOM05D004671 ORTHO05D005638 1.3e-25 120.6 134 46.3
Haze_13677 Corylus avellana HOM05D004671 ORTHO05D005638 2.2e-25 119.8 164 42.7
MELO3C031814.2 Cucumis melo HOM05D004671 ORTHO05D005638 2.6e-23 112.8 135 46.7
SMO276G0042 Selaginella moellendorffii HOM05D004671 ORTHO05D005638 3.8e-22 109.0 142 44.4
SMO143G0293 Selaginella moellendorffii HOM05D004671 ORTHO05D005638 1.1e-21 107.5 147 40.1
Zm00001eb440850 Zea mays HOM05D004671 ORTHO05D005638 1.2e-18 97.4 125 44.0
unitig_37.g12531 Utricularia gibba HOM05D004671 ORTHO05D005638 3.7e-17 92.4 134 41.0
Oeu002719.1 Olea europaea HOM05D004671 ORTHO05D005638 1.0e-14 84.3 179 35.2
Cre16.g673900 Chlamydomonas reinhardtii HOM05D004671 ORTHO05D005638 2.9e-14 82.8 129 33.3
Cre11.g476376 Chlamydomonas reinhardtii HOM05D030013 ORTHO05D028799 1.2e-10 70.9 109 33.9


User provided reference genes

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