Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0016899 Camellia sinensis var. sinensis HOM05D005060 ORTHO05D005975 9.1e-62 240.4 148 100.0
PSO339G2385 Papaver somniferum HOM05D005060 ORTHO05D005975 9.2e-14 80.9 146 52.1
Cpa.g.sc33.199 Carica papaya HOM05D005060 ORTHO05D005975 3.5e-13 79.0 156 46.8
Oeu023007.1 Olea europaea HOM05D005060 ORTHO05D005975 4.6e-13 78.6 152 55.3
Rhsim04G0118500 Rhododendron simsii HOM05D005060 ORTHO05D005975 7.8e-13 77.8 149 44.3
MSTRG.6293 Avicennia marina HOM05D005060 ORTHO05D005975 3.9e-12 75.5 156 55.8
Lj1C23T21 Lonicera japonica HOM05D005060 ORTHO05D005975 8.6e-12 74.3 118 52.5
Nn7g37114 Nelumbo nucifera HOM05D005060 ORTHO05D005975 8.6e-12 74.3 140 53.6
TAR369G0553 Trochodendron aralioides HOM05D005060 ORTHO05D005975 8.6e-12 74.3 142 52.8
GSVIVG01025849001 Vitis vinifera HOM05D005060 ORTHO05D005975 1.5e-11 73.6 124 60.5
PSO384G0259 Papaver somniferum HOM05D005060 ORTHO05D005975 1.9e-11 73.2 154 48.7
Actinidia24546 Actinidia chinensis HOM05D005060 ORTHO05D005975 2.5e-11 72.8 94 69.1
Migut.J01559 Erythranthe guttata HOM05D005060 ORTHO05D005975 2.5e-11 72.8 157 52.9
ClCG04G005980 Citrullus lanatus HOM05D005060 ORTHO05D005975 4.3e-11 72.0 165 40.0
DCAR_009091 Daucus carota HOM05D005060 ORTHO05D005975 4.3e-11 72.0 145 53.1
Hma1.2p1_0031F.1_g018400 Hydrangea macrophylla HOM05D005060 ORTHO05D005975 4.3e-11 72.0 139 53.2
Hma1.2p1_2089F.1_g313840 Hydrangea macrophylla HOM05D005060 ORTHO05D005975 4.3e-11 72.0 139 53.2
Aqoxy1G00045 Aquilegia oxysepala HOM05D005060 ORTHO05D005975 9.5e-11 70.9 155 50.3
Potri.016G027600 Populus trichocarpa HOM05D005060 ORTHO05D005975 9.5e-11 70.9 152 41.4
CAN.G128.101 Capsicum annuum HOM05D005060 ORTHO05D005975 1.6e-10 70.1 147 46.9
Peaxi162Scf00153g01321 Petunia axillaris HOM05D005060 ORTHO05D005975 1.6e-10 70.1 152 54.6
Duzib128G1851 Durio zibethinus HOM05D005060 ORTHO05D005975 2.8e-10 69.3 141 46.8
vmacro08973 Vaccinium macrocarpon HOM05D005060 ORTHO05D005975 3.6e-10 68.9 155 41.9
ECA236G1981 Erigeron canadensis HOM05D005060 ORTHO05D005975 4.7e-10 68.6 142 51.4
MD07G1060800 Malus domestica HOM05D005060 ORTHO05D005975 4.7e-10 68.6 155 36.8
PGSC0003DMG400028107 Solanum tuberosum HOM05D005060 ORTHO05D005975 4.7e-10 68.6 158 47.5
Eucgr.A02181 Eucalyptus grandis HOM05D005060 ORTHO05D005975 6.2e-10 68.2 156 46.8
SGA_v2.0_scaffold66G22311 Striga asiatica HOM05D005060 ORTHO05D005975 6.2e-10 68.2 162 38.9
MELO3C019148.2 Cucumis melo HOM05D005060 ORTHO05D005975 8.1e-10 67.8 128 42.2
Nitab4.5_0003286g0020 Nicotiana tabacum HOM05D005060 ORTHO05D005975 1.1e-09 67.4 150 42.0
Haze_20306 Corylus avellana HOM05D005060 ORTHO05D005975 1.8e-09 66.6 166 38.6
Sopen10g031600 Solanum pennellii HOM05D005060 ORTHO05D005975 1.8e-09 66.6 92 57.6
Thecc.05G132800 Theobroma cacao HOM05D005060 ORTHO05D005975 3.1e-09 65.9 147 35.4
CsaV3_4G029150 Cucumis sativus L. HOM05D005060 ORTHO05D005975 4.0e-09 65.5 152 38.8
MD02G1260500 Malus domestica HOM05D005060 ORTHO05D005975 6.8e-09 64.7 159 39.0
Cc06_g22810 Coffea canephora HOM05D005060 ORTHO05D005975 8.9e-09 64.3 147 51.0
Prupe.2G065900 Prunus persica HOM05D005060 ORTHO05D005975 8.9e-09 64.3 148 41.2
Gohir.A13G001200 Gossypium hirsutum HOM05D005060 ORTHO05D005975 1.5e-08 63.5 135 39.3
Ciclev10013047m.g Citrus clementina HOM05D005060 ORTHO05D005975 2.0e-08 63.2 160 46.9
Solyc10g081100.3 Solanum lycopersicum HOM05D005060 ORTHO05D005975 2.0e-08 63.2 142 45.1
MBI19_g25016_MAGBIO Magnolia biondii HOM05D005060 ORTHO05D005975 2.6e-08 62.8 104 59.6
Sabra16G0032200 Salix brachista HOM05D005060 ORTHO05D005975 2.6e-08 62.8 158 38.0
Nitab4.5_0000062g0300 Nicotiana tabacum HOM05D005060 ORTHO05D005975 3.4e-08 62.4 150 48.0
SGA_v2.0_scaffold69G23194 Striga asiatica HOM05D005060 ORTHO05D005975 3.4e-08 62.4 89 62.9
TWI53G1989 Tripterygium wilfordii HOM05D005060 ORTHO05D005975 3.4e-08 62.4 158 43.0
Cfa019938 Carpinus fangiana HOM05D005060 ORTHO05D005975 5.8e-08 61.6 116 40.5
Lj1g0025022 Lotus japonicus HOM05D005060 ORTHO05D005975 5.8e-08 61.6 134 35.1
Sed0011991 Sechium edule HOM05D005060 ORTHO05D005975 5.8e-08 61.6 145 38.6
AT3G56910 Arabidopsis thaliana HOM05D005060 ORTHO05D005975 7.6e-08 61.2 153 37.9
Sabra16G0031900 Salix brachista HOM05D005060 ORTHO05D005975 7.6e-08 61.2 99 46.5
AL5G38310 Arabidopsis lyrata HOM05D005060 ORTHO05D005975 1.7e-07 60.1 156 42.9
Duzib093G0151 Durio zibethinus HOM05D005060 ORTHO05D005975 1.7e-07 60.1 145 36.6
Lsat_1_v5_gn_8_109400 Lactuca sativa HOM05D005060 ORTHO05D005975 1.7e-07 60.1 88 44.3
PGSC0003DMG400007184 Solanum tuberosum HOM05D005060 ORTHO05D005975 1.7e-07 60.1 113 55.8
Ca_08351_v3 Cicer arietinum L. HOM05D005060 ORTHO05D005975 2.9e-07 59.3 153 35.9
PGR042G1122 Punica granatum HOM05D005060 ORTHO05D005975 2.9e-07 59.3 161 42.2
Cpa.g.sc33.198 Carica papaya HOM05D005060 ORTHO05D005975 4.9e-07 58.5 160 48.1
TWI74G0004 Tripterygium wilfordii HOM05D005060 ORTHO05D005975 4.9e-07 58.5 143 48.3
CiPaw.10G123900 Carya illinoinensis HOM05D005060 ORTHO05D005975 6.4e-07 58.2 93 61.3
HanXRQChr05g0130501 Helianthus annuus HOM05D005060 ORTHO05D005975 6.4e-07 58.2 161 39.8
RcHm_v2.0_Chr1g0331611 Rosa chinensis HOM05D005060 ORTHO05D005975 6.4e-07 58.2 137 38.0
Carub.0005s2365 Capsella rubella HOM05D005060 ORTHO05D005975 1.1e-06 57.4 156 41.7
Os01g0278900 Oryza sativa ssp. japonica HOM05D005060 ORTHO05D005975 1.1e-06 57.4 149 35.6
HPP92_011277 Vanilla planifolia HOM05D065872 ORTHO05D005975 1.4e-06 57.0 139 49.6
Sopen10g028770 Solanum pennellii HOM05D005060 ORTHO05D005975 1.9e-06 56.6 149 50.3
Medtr7g088520 Medicago truncatula HOM05D005060 ORTHO05D005975 2.4e-06 56.2 151 39.7
BcaC08g44810 Brassica carinata HOM05D005060 ORTHO05D005975 3.2e-06 55.8 141 36.2
CDE02G1443 Ceratophyllum demersum HOM05D005060 ORTHO05D005975 3.2e-06 55.8 157 47.1
HPP92_011298 Vanilla planifolia HOM05D065872 ORTHO05D005975 4.2e-06 55.5 143 49.7
Ciclev10013042m.g Citrus clementina HOM05D005060 ORTHO05D005975 5.4e-06 55.1 150 48.7
Atru.chr1.1520 Acer truncatum HOM05D005060 ORTHO05D005975 7.1e-06 54.7 161 41.6
Gohir.A01G192800 Gossypium hirsutum HOM05D005060 ORTHO05D005975 7.1e-06 54.7 145 33.1
Sp5g05680 Schrenkiella parvula HOM05D005060 ORTHO05D005975 7.1e-06 54.7 147 37.4
FAN10G4368 Fragaria x ananassa HOM05D002241 ORTHO05D002458 9.2e-06 54.3 120 35.8
Gohir.D01G177000 Gossypium hirsutum HOM05D005060 ORTHO05D005975 9.2e-06 54.3 145 33.1
Gorai.002G226200 Gossypium raimondii HOM05D005060 ORTHO05D005975 9.2e-06 54.3 145 33.1


User provided reference genes

Program Settings