Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0016875 Camellia sinensis var. sinensis HOM05D004463 ORTHO05D004724 9.0e-77 291.2 297 100.0
Actinidia27858 Actinidia chinensis HOM05D000578 ORTHO05D000422 1.9e-18 97.4 278 70.1
Dinv42004 Davidia involucrata HOM05D004463 ORTHO05D004724 9.5e-18 95.1 210 88.6
Potri.004G161800 Populus trichocarpa HOM05D004463 ORTHO05D004724 9.5e-18 95.1 209 81.8
CAN.G95.2 Capsicum annuum HOM05D004463 ORTHO05D004724 1.6e-17 94.4 214 79.0
Cc02_g16980 Coffea canephora HOM05D004463 ORTHO05D004724 1.6e-17 94.4 215 87.4
Sabra04G0108800 Salix brachista HOM05D004463 ORTHO05D004724 1.6e-17 94.4 234 76.9
GSVIVG01024180001 Vitis vinifera HOM05D004463 ORTHO05D004724 2.1e-17 94.0 208 88.9
QL11p046341 Quercus lobata HOM05D004463 ORTHO05D004724 6.1e-17 92.4 240 73.8
Haze_03437 Corylus avellana HOM05D004463 ORTHO05D004724 8.0e-17 92.0 243 75.3
MD10G1063900 Malus domestica HOM05D004463 ORTHO05D004724 1.0e-16 91.7 219 79.0
CiPaw.14G035900 Carya illinoinensis HOM05D004463 ORTHO05D004724 1.4e-16 91.3 235 79.6
CiPaw.13G045000 Carya illinoinensis HOM05D004463 ORTHO05D004724 1.8e-16 90.9 235 80.0
Sopen10g024240 Solanum pennellii HOM05D004463 ORTHO05D004724 1.8e-16 90.9 241 74.7
Duzib248G1389 Durio zibethinus HOM05D004463 ORTHO05D004724 3.1e-16 90.1 238 75.2
PGSC0003DMG400026665 Solanum tuberosum HOM05D004463 ORTHO05D004724 3.1e-16 90.1 243 74.1
Duzib052G0336 Durio zibethinus HOM05D004463 ORTHO05D004724 5.2e-16 89.4 213 87.8
Thecc.02G075900 Theobroma cacao HOM05D004463 ORTHO05D004724 5.2e-16 89.4 238 80.7
CsaV3_7G000350 Cucumis sativus L. HOM05D004463 ORTHO05D004724 6.8e-16 89.0 245 73.9
Duzib132G0628 Durio zibethinus HOM05D004463 ORTHO05D004724 8.9e-16 88.6 215 85.6
Solyc10g054330.3 Solanum lycopersicum HOM05D004463 ORTHO05D004724 1.2e-15 88.2 243 74.5
ClCG02G004610 Citrullus lanatus HOM05D004463 ORTHO05D004724 1.5e-15 87.8 245 73.1
MELO3C013423.2 Cucumis melo HOM05D004463 ORTHO05D004724 1.5e-15 87.8 245 73.5
Oeu055628.1 Olea europaea HOM05D004463 ORTHO05D004724 2.6e-15 87.0 210 88.6
Oeu046135.1 Olea europaea HOM05D004463 ORTHO05D004724 5.8e-15 85.9 210 87.6
Sed0022229 Sechium edule HOM05D004463 ORTHO05D004724 5.8e-15 85.9 243 73.7
Gohir.A03G199000 Gossypium hirsutum HOM05D004463 ORTHO05D004724 7.5e-15 85.5 251 72.5
arahy.Tifrunner.gnm1.ann1.0JY1T4 Arachis hypogaea HOM05D004463 ORTHO05D004724 1.3e-14 84.7 239 74.1
arahy.Tifrunner.gnm1.ann1.2L6AT5 Arachis hypogaea HOM05D004463 ORTHO05D004724 1.3e-14 84.7 239 74.1
Glyma.04G008700 Glycine max HOM05D004463 ORTHO05D004724 1.3e-14 84.7 241 71.4
Manes.15G189900 Manihot esculenta HOM05D004463 ORTHO05D004724 1.3e-14 84.7 209 84.2
Manes.17G001400 Manihot esculenta HOM05D004463 ORTHO05D004724 1.3e-14 84.7 209 85.2
Dinv23459 Davidia involucrata HOM05D004463 ORTHO05D004724 1.7e-14 84.3 210 87.1
Glyma.06G008500 Glycine max HOM05D004463 ORTHO05D004724 2.9e-14 83.6 244 70.9
Gohir.D02G220400 Gossypium hirsutum HOM05D004463 ORTHO05D004724 2.9e-14 83.6 252 71.4
Phvul.009G003600 Phaseolus vulgaris HOM05D004463 ORTHO05D004724 2.9e-14 83.6 247 71.3
Atru.chr5.3137 Acer truncatum HOM05D004463 ORTHO05D004724 3.7e-14 83.2 213 80.8
Actinidia00571 Actinidia chinensis HOM05D004463 ORTHO05D004724 3.7e-14 83.2 211 81.5
Oeu036635.1 Olea europaea HOM05D004463 ORTHO05D004724 3.7e-14 83.2 210 88.1
PGR042G1049 Punica granatum HOM05D004463 ORTHO05D004724 3.7e-14 83.2 245 71.0
ECA232G1454 Erigeron canadensis HOM05D004463 ORTHO05D004724 8.3e-14 82.0 215 86.5
MD00G1040200 Malus domestica HOM05D004463 ORTHO05D004724 8.3e-14 82.0 221 76.5
Ciclev10029089m.g Citrus clementina HOM05D004463 ORTHO05D004724 1.1e-13 81.6 221 76.9
Gorai.005G248300 Gossypium raimondii HOM05D004463 ORTHO05D004724 1.1e-13 81.6 252 62.7
Nitab4.5_0001317g0040 Nicotiana tabacum HOM05D004463 ORTHO05D004724 1.4e-13 81.3 238 77.7
VMungo1309G0843 Vigna mungo HOM05D000018 ORTHO05D001040 1.9e-13 80.9 243 70.8
CiPaw.06G128800 Carya illinoinensis HOM05D004463 ORTHO05D004724 4.1e-13 79.7 239 78.2
Rhsim05G0068600 Rhododendron simsii HOM05D004463 ORTHO05D004724 7.0e-13 79.0 210 85.7
RcHm_v2.0_Chr6g0267601 Rosa chinensis HOM05D004463 ORTHO05D004724 7.0e-13 79.0 220 75.9
TPR.G32219 Trifolium pratense HOM05D004463 ORTHO05D004724 7.0e-13 79.0 227 75.3
Lalb_Chr23g0265191 Lupinus albus HOM05D004463 ORTHO05D004724 9.2e-13 78.6 220 78.6
CANSAT11G2458 Cannabis sativa HOM05D004463 ORTHO05D004724 1.6e-12 77.8 246 72.0
COL.COLO4_26036 Corchorus olitorius HOM05D004463 ORTHO05D004724 2.7e-12 77.0 239 73.2
Cpa.g.sc150.22 Carica papaya HOM05D004463 ORTHO05D004724 1.7e-11 74.3 218 77.5
Ca_15338_v3 Cicer arietinum L. HOM05D004463 ORTHO05D004724 1.7e-11 74.3 220 77.3
Lj1g0018700 Lotus japonicus HOM05D004463 ORTHO05D004724 1.7e-11 74.3 248 70.2
Prupe.8G085500 Prunus persica HOM05D004463 ORTHO05D004724 1.1e-10 71.6 220 66.8
Hma1.2p1_0066F.1_g035800 Hydrangea macrophylla HOM05D004463 ORTHO05D004724 1.5e-10 71.2 162 86.4
DCAR_022913 Daucus carota HOM05D004463 ORTHO05D004724 2.5e-10 70.5 219 82.2
HanXRQChr05g0143421 Helianthus annuus HOM05D004463 ORTHO05D004724 4.3e-10 69.7 210 82.9
MBI19_g03564_MAGBIO Magnolia biondii HOM05D004463 ORTHO05D004724 4.3e-10 69.7 229 78.2
FAN15G3389 Fragaria x ananassa HOM05D004463 ORTHO05D004724 2.1e-09 67.4 238 75.6
FAN24G1814 Fragaria x ananassa HOM05D004463 ORTHO05D004724 2.8e-09 67.0 239 75.3
FAN20G1990 Fragaria x ananassa HOM05D004463 ORTHO05D004724 3.6e-09 66.6 242 73.6
FvH4_2g10323 Fragaria vesca HOM05D004463 ORTHO05D004724 4.7e-09 66.2 241 74.3
FAN27G0878 Fragaria x ananassa HOM05D004463 ORTHO05D004724 4.7e-09 66.2 241 74.3
Hund00218 Selenicereus undatus HOM05D004463 ORTHO05D004724 6.2e-09 65.9 209 70.3
Eucgr.I01324 Eucalyptus grandis HOM05D004463 ORTHO05D004724 3.1e-08 63.5 219 75.3
Os10g0545300 Oryza sativa ssp. japonica HOM05D004463 ORTHO05D004724 3.1e-08 63.5 208 82.7
Sed0016215 Sechium edule HOM05D004463 ORTHO05D004724 6.8e-08 62.4 242 74.8
Hund26868 Selenicereus undatus HOM05D004463 ORTHO05D004724 8.9e-08 62.0 234 71.4
AUR62010398 Chenopodium quinoa HOM05D004463 ORTHO05D004724 1.7e-06 57.8 106 90.6
AUR62016820 Chenopodium quinoa HOM05D004463 ORTHO05D004724 1.7e-06 57.8 106 90.6
Manes.05G152600 Manihot esculenta HOM05D004463 ORTHO05D004724 2.2e-06 57.4 210 73.8
TWI31G1301 Tripterygium wilfordii HOM05D004463 ORTHO05D004724 2.2e-06 57.4 220 73.2
Atru.chr13.360 Acer truncatum HOM05D004463 ORTHO05D004724 3.7e-06 56.6 214 82.2
Nn5g29212 Nelumbo nucifera HOM05D004463 ORTHO05D004724 6.4e-06 55.8 135 74.1


User provided reference genes

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