Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0016869 Camellia sinensis var. sinensis HOM05D004735 ORTHO05D005243 2.6e-83 312.0 156 100.0
CSS0011678 Camellia sinensis var. sinensis HOM05D004735 ORTHO05D005243 1.5e-35 153.3 110 71.8
Dinv33275 Davidia involucrata HOM05D004735 ORTHO05D005243 3.3e-22 109.0 88 65.9
CSS0022550 Camellia sinensis var. sinensis HOM05D004735 ORTHO05D005243 1.5e-19 100.1 89 60.7
Dinv25616 Davidia involucrata HOM05D004735 ORTHO05D005243 4.5e-19 98.6 88 61.4
Hma1.2p1_0421F.1_g149860 Hydrangea macrophylla HOM05D004735 ORTHO05D005243 9.4e-17 90.9 94 57.4
DCAR_014465 Daucus carota HOM05D004735 ORTHO05D005243 8.0e-16 87.8 89 56.2
Lj7A617T74 Lonicera japonica HOM05D004735 ORTHO05D005243 1.4e-15 87.0 89 57.3
Actinidia37716 Actinidia chinensis HOM05D004735 ORTHO05D005243 5.2e-15 85.1 89 59.6
Cc07_g01350 Coffea canephora HOM05D004735 ORTHO05D005243 1.7e-13 80.1 89 50.6
Oeu035383.1 Olea europaea HOM05D004735 ORTHO05D005243 6.3e-13 78.2 89 52.8
Lsat_1_v5_gn_3_104900 Lactuca sativa HOM05D004735 ORTHO05D005243 4.1e-12 75.5 80 52.5
Migut.F00010 Erythranthe guttata HOM05D004735 ORTHO05D005243 1.6e-11 73.6 99 47.5
HanXRQChr17g0550891 Helianthus annuus HOM05D004735 ORTHO05D005243 2.0e-11 73.2 84 52.4
vmacro18383 Vaccinium macrocarpon HOM05D004735 ORTHO05D005243 4.5e-11 72.0 74 54.1
QL02p069299 Quercus lobata HOM05D004735 ORTHO05D005243 7.7e-11 71.2 91 48.4
Cfa007143 Carpinus fangiana HOM05D004735 ORTHO05D005243 1.3e-10 70.5 91 47.3
SalBow4G2972 Salvia bowleyana HOM05D004735 ORTHO05D005243 1.7e-10 70.1 101 43.6
CAN.G473.160 Capsicum annuum HOM05D004735 ORTHO05D005243 2.2e-10 69.7 91 46.2
MSTRG.24121 Avicennia marina HOM05D004735 ORTHO05D005243 2.9e-10 69.3 89 44.9
SGA_v2.0_scaffold423G51443 Striga asiatica HOM05D004735 ORTHO05D005243 2.9e-10 69.3 99 45.5
Nitab4.5_0000519g0300 Nicotiana tabacum HOM05D004735 ORTHO05D005243 8.5e-10 67.8 91 44.0
Sopen02g039210 Solanum pennellii HOM05D004735 ORTHO05D005243 1.1e-09 67.4 91 45.1
Nitab4.5_0002172g0170 Nicotiana tabacum HOM05D004735 ORTHO05D005243 1.9e-09 66.6 91 42.9
Haze_14980 Corylus avellana HOM05D004735 ORTHO05D005243 4.2e-09 65.5 91 45.1
Prupe.3G314000 Prunus persica HOM05D004735 ORTHO05D005243 4.2e-09 65.5 94 43.6
Manes.04G093600 Manihot esculenta HOM05D004735 ORTHO05D005243 9.4e-09 64.3 90 46.7
ECA246G4565 Erigeron canadensis HOM05D004735 ORTHO05D005243 1.2e-08 63.9 84 45.2
Rhsim08G0038800 Rhododendron simsii HOM05D004735 ORTHO05D005243 1.2e-08 63.9 74 50.0
GSVIVG01032979001 Vitis vinifera HOM05D004735 ORTHO05D005243 1.6e-08 63.5 90 47.8
HanXRQChr15g0475721 Helianthus annuus HOM05D004735 ORTHO05D005243 2.1e-08 63.2 68 52.9
Thecc.04G048500 Theobroma cacao HOM05D004735 ORTHO05D005243 2.1e-08 63.2 94 40.4
Duzib264G0086 Durio zibethinus HOM05D004735 ORTHO05D005243 3.6e-08 62.4 95 41.1
Peaxi162Scf00420g00844 Petunia axillaris HOM05D004735 ORTHO05D005243 3.6e-08 62.4 85 41.2
CiPaw.03G001400 Carya illinoinensis HOM05D004735 ORTHO05D005243 6.1e-08 61.6 94 42.6
Atru.chr6.2700 Acer truncatum HOM05D004735 ORTHO05D005243 8.0e-08 61.2 91 45.1
Duzib187G1028 Durio zibethinus HOM05D004735 ORTHO05D005243 1.0e-07 60.8 95 41.1
Oeu035273.1 Olea europaea HOM05D004735 ORTHO05D005243 1.4e-07 60.5 103 40.8
TAR371G0169 Trochodendron aralioides HOM05D004735 ORTHO05D008917 1.4e-07 60.5 92 42.4
Solyc02g094540.4 Solanum lycopersicum HOM05D004735 ORTHO05D005243 2.3e-07 59.7 72 48.6
CiPaw.04G001000 Carya illinoinensis HOM05D004735 ORTHO05D005243 4.0e-07 58.9 73 45.2
AUR62030086 Chenopodium quinoa HOM05D004735 ORTHO05D005243 5.2e-07 58.5 107 35.5
Duzib147G0188 Durio zibethinus HOM05D004735 ORTHO05D005243 5.2e-07 58.5 91 40.7
Lj1g0021966 Lotus japonicus HOM05D004735 ORTHO05D005243 5.2e-07 58.5 91 44.0
TWI32G0607 Tripterygium wilfordii HOM05D004735 ORTHO05D005243 6.7e-07 58.2 93 38.7
Manes.11G076100 Manihot esculenta HOM05D004735 ORTHO05D005243 8.8e-07 57.8 69 52.2
MD09G1002200 Malus domestica HOM05D004735 ORTHO05D005243 1.2e-06 57.4 102 38.2
Gorai.011G088500 Gossypium raimondii HOM05D004735 ORTHO05D005243 1.5e-06 57.0 120 33.3
Potri.014G144100 Populus trichocarpa HOM05D004735 ORTHO05D005243 2.6e-06 56.2 90 43.3
Gohir.D10G081300 Gossypium hirsutum HOM05D004735 ORTHO05D005243 3.3e-06 55.8 120 32.5
Potri.002G237800 Populus trichocarpa HOM05D004735 ORTHO05D005243 4.4e-06 55.5 98 39.8
Gohir.A10G069900 Gossypium hirsutum HOM05D004735 ORTHO05D005243 5.7e-06 55.1 122 34.4
FvH4_6g54340 Fragaria vesca HOM05D004735 ORTHO05D005243 7.5e-06 54.7 92 41.3
FAN02G4354 Fragaria x ananassa HOM05D004735 ORTHO05D005243 7.5e-06 54.7 92 41.3
FAN05G2416 Fragaria x ananassa HOM05D004735 ORTHO05D005243 7.5e-06 54.7 92 41.3
FAN09G0836 Fragaria x ananassa HOM05D004735 ORTHO05D005243 7.5e-06 54.7 92 41.3
FAN14G4878 Fragaria x ananassa HOM05D004735 ORTHO05D005243 7.5e-06 54.7 92 41.3
MD17G1006400 Malus domestica HOM05D004735 ORTHO05D005243 9.7e-06 54.3 94 38.3


User provided reference genes

Program Settings