Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0016849 Camellia sinensis var. sinensis HOM05D008563 ORTHO05D009802 1.3e-68 263.1 147 100.0
CSS0048960 Camellia sinensis var. sinensis HOM05D008563 ORTHO05D009802 4.6e-66 254.6 147 97.3
CSS0034251 Camellia sinensis var. sinensis HOM05D008563 ORTHO05D009802 2.2e-28 129.4 148 62.8
CSS0042453 Camellia sinensis var. sinensis HOM05D008563 ORTHO05D009802 2.2e-28 129.4 148 62.8
Duzib084G1352 Durio zibethinus HOM05D008563 ORTHO05D009802 1.7e-15 86.7 169 45.0
Thecc.03G112200 Theobroma cacao HOM05D008563 ORTHO05D009802 1.4e-14 83.6 166 45.2
Sed0012187 Sechium edule HOM05D008563 ORTHO05D009802 7.8e-13 77.8 154 40.9
Sed0005169 Sechium edule HOM05D008563 ORTHO05D009802 1.9e-11 73.2 148 39.2
Gohir.D12G187700 Gossypium hirsutum HOM05D008563 ORTHO05D009802 4.3e-11 72.0 79 57.0
Gorai.008G201100 Gossypium raimondii HOM05D008563 ORTHO05D009802 4.3e-11 72.0 79 58.2
Hma1.2p1_0744F.1_g211700 Hydrangea macrophylla HOM05D008563 ORTHO05D009802 7.3e-11 71.2 149 46.3
COL.COLO4_28804 Corchorus olitorius HOM05D008563 ORTHO05D009802 6.1e-10 68.2 172 44.2
Gohir.D03G099300 Gossypium hirsutum HOM05D008563 ORTHO05D009802 6.1e-10 68.2 155 45.2
Gorai.003G104300 Gossypium raimondii HOM05D008563 ORTHO05D009802 8.0e-10 67.8 156 43.6
Dinv36837 Davidia involucrata HOM05D008563 ORTHO05D009802 1.4e-09 67.0 152 46.7
Nitab4.5_0000646g0100 Nicotiana tabacum HOM05D014920 ORTHO05D009802 2.3e-09 66.2 151 41.1
PSO017G1525 Papaver somniferum HOM05D042328 ORTHO05D009956 2.3e-09 66.2 154 41.6
CiPaw.15G117600 Carya illinoinensis HOM05D008563 ORTHO05D009802 6.8e-09 64.7 157 42.7
Medtr2g058870 Medicago truncatula HOM05D008563 ORTHO05D009956 8.9e-09 64.3 78 52.6
Atru.chr11.1516 Acer truncatum HOM05D018013 ORTHO05D013371 1.2e-08 63.9 156 40.4
Oeu054579.1 Olea europaea HOM05D011353 ORTHO05D009956 1.5e-08 63.5 132 38.6
TPR.G2004 Trifolium pratense HOM05D008563 ORTHO05D009802 2.6e-08 62.8 162 38.9
Glyma.04G157900 Glycine max HOM05D008563 ORTHO05D009956 4.4e-08 62.0 94 51.1
Nitab4.5_0004190g0010 Nicotiana tabacum HOM05D014920 ORTHO05D009802 4.4e-08 62.0 167 43.7
PSO478G2273 Papaver somniferum HOM05D042328 ORTHO05D009956 5.8e-08 61.6 154 40.3
Lsat_1_v5_gn_4_113140 Lactuca sativa HOM05D038017 ORTHO05D009802 7.5e-08 61.2 78 56.4
PGSC0003DMG400004059 Solanum tuberosum HOM05D014920 ORTHO05D009802 7.5e-08 61.2 163 39.9
Manes.01G105700 Manihot esculenta HOM05D008889 ORTHO05D009956 1.3e-07 60.5 119 45.4
QL10p021529 Quercus lobata HOM05D008563 ORTHO05D009802 1.3e-07 60.5 157 42.0
Aqoxy3G03789 Aquilegia oxysepala HOM05D018804 ORTHO05D009802 1.7e-07 60.1 146 37.7
Medtr4g112870 Medicago truncatula HOM05D008563 ORTHO05D009802 3.7e-07 58.9 150 34.7
Phvul.009G190900 Phaseolus vulgaris HOM05D008563 ORTHO05D009802 6.4e-07 58.2 139 39.6
Peaxi162Scf00188g00068 Petunia axillaris HOM05D011353 ORTHO05D009802 8.3e-07 57.8 143 39.9
Actinidia01421 Actinidia chinensis HOM05D008563 ORTHO05D009802 1.4e-06 57.0 140 40.7
Lj1g0003987 Lotus japonicus HOM05D008889 ORTHO05D009956 1.4e-06 57.0 120 40.0
Nn3g17602 Nelumbo nucifera HOM05D008563 ORTHO05D009802 1.4e-06 57.0 158 44.9
Psat4g045520 Pisum sativum HOM05D008563 ORTHO05D009802 1.4e-06 57.0 161 37.3
TPR.G3280 Trifolium pratense HOM05D008889 ORTHO05D009956 1.4e-06 57.0 124 37.1
Psat5g232520 Pisum sativum HOM05D008563 ORTHO05D009802 1.9e-06 56.6 77 51.9
Nitab4.5_0002805g0110 Nicotiana tabacum HOM05D014920 ORTHO05D009802 2.4e-06 56.2 159 39.0
TWI60G1323 Tripterygium wilfordii HOM05D008889 ORTHO05D009956 2.4e-06 56.2 127 38.6
CAN.G184.15 Capsicum annuum HOM05D011353 ORTHO05D009802 3.2e-06 55.8 145 37.9
Oeu024138.1 Olea europaea HOM05D011353 ORTHO05D009956 3.2e-06 55.8 132 40.2
Phvul.008G023501 Phaseolus vulgaris HOM05D008889 ORTHO05D009956 3.2e-06 55.8 113 39.8
Gohir.A13G093400 Gossypium hirsutum HOM05D018013 ORTHO05D013371 4.1e-06 55.5 79 53.2
Actinidia35060 Actinidia chinensis HOM05D014692 ORTHO05D014734 5.4e-06 55.1 145 41.4
Gohir.A03G072700 Gossypium hirsutum HOM05D008563 ORTHO05D009802 5.4e-06 55.1 158 43.7
Lj4g0009196 Lotus japonicus HOM05D008563 ORTHO05D009802 5.4e-06 55.1 136 43.4
Lalb_Chr04g0258271 Lupinus albus HOM05D008889 ORTHO05D009956 7.0e-06 54.7 125 40.0
Rhsim09G0117600 Rhododendron simsii HOM05D011353 ORTHO05D009802 7.0e-06 54.7 120 47.5
Atru.chr9.645 Acer truncatum HOM05D008563 ORTHO05D009802 9.2e-06 54.3 35 80.0
Ca_02709_v3 Cicer arietinum L. HOM05D008563 ORTHO05D009956 9.2e-06 54.3 144 41.7
Manes.02G062300 Manihot esculenta HOM05D008889 ORTHO05D009956 9.2e-06 54.3 116 41.4


User provided reference genes

Program Settings