Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0016825 Camellia sinensis var. sinensis HOM05D005792 ORTHO05D007171 7.6e-183 643.7 315 100.0
CSS0018708 Camellia sinensis var. sinensis HOM05D005792 ORTHO05D007171 9.6e-178 626.7 315 98.4
CSS0011850 Camellia sinensis var. sinensis HOM05D005792 ORTHO05D007171 2.2e-174 615.5 315 96.5
Dinv39569 Davidia involucrata HOM05D005792 ORTHO05D007171 5.3e-144 514.6 312 79.8
vmacro21840 Vaccinium macrocarpon HOM05D005792 ORTHO05D007171 1.9e-141 506.1 338 72.8
Nitab4.5_0000498g0200 Nicotiana tabacum HOM05D005792 ORTHO05D007171 1.4e-139 500.0 311 76.5
Nitab4.5_0002353g0010 Nicotiana tabacum HOM05D005792 ORTHO05D007171 1.3e-137 493.4 308 75.0
Rhsim06G0009800 Rhododendron simsii HOM05D005792 ORTHO05D007171 5.3e-136 488.0 313 76.0
Solyc12g094450.3 Solanum lycopersicum HOM05D005792 ORTHO05D007171 4.5e-135 485.0 311 74.9
Sopen12g031340 Solanum pennellii HOM05D005792 ORTHO05D007171 1.5e-133 479.9 311 74.3
Potri.005G247600 Populus trichocarpa HOM05D005792 ORTHO05D007171 8.0e-132 474.2 316 72.8
Cc10_g00990 Coffea canephora HOM05D005792 ORTHO05D007171 1.4e-131 473.4 316 71.8
CAN.G401.3 Capsicum annuum HOM05D005792 ORTHO05D007171 1.8e-131 473.0 311 72.7
Hma1.2p1_1260F.1_g270990 Hydrangea macrophylla HOM05D005792 ORTHO05D007171 6.7e-131 471.1 311 73.6
CiPaw.08G070700 Carya illinoinensis HOM05D005792 ORTHO05D007171 2.0e-130 469.5 315 70.2
HanXRQChr14g0429001 Helianthus annuus HOM05D005792 ORTHO05D007171 2.0e-130 469.5 308 72.4
PGSC0003DMG400029326 Solanum tuberosum HOM05D005792 ORTHO05D007171 2.0e-130 469.5 340 68.2
CiPaw.08G070500 Carya illinoinensis HOM05D005792 ORTHO05D007171 2.6e-130 469.2 315 70.2
Migut.C00916 Erythranthe guttata HOM05D005792 ORTHO05D007171 9.7e-130 467.2 315 71.4
Lj4C15T2 Lonicera japonica HOM05D005792 ORTHO05D007171 2.2e-129 466.1 311 72.0
Hund05134 Selenicereus undatus HOM05D005792 ORTHO05D007171 6.3e-129 464.5 312 71.2
GSVIVG01008709001 Vitis vinifera HOM05D005792 ORTHO05D007171 1.4e-128 463.4 311 73.0
QL02p013536 Quercus lobata HOM05D005792 ORTHO05D007171 1.8e-128 463.0 316 70.3
Manes.18G007700 Manihot esculenta HOM05D005792 ORTHO05D007171 2.4e-128 462.6 310 71.9
Actinidia15473 Actinidia chinensis HOM05D005792 ORTHO05D007171 1.6e-127 459.9 330 69.7
Peaxi162Scf00064g00910 Petunia axillaris HOM05D005792 ORTHO05D007171 3.5e-127 458.8 311 72.0
Eucgr.F01710 Eucalyptus grandis HOM05D005792 ORTHO05D007171 7.7e-127 457.6 315 68.9
ECA238G1749 Erigeron canadensis HOM05D005792 ORTHO05D007171 1.3e-126 456.8 302 70.9
unitig_747.g21523 Utricularia gibba HOM05D005792 ORTHO05D007171 2.9e-126 455.7 313 70.6
EL10Ac1g02028 Beta vulgaris HOM05D005792 ORTHO05D007171 3.8e-126 455.3 308 70.1
CANSAT51G0003 Cannabis sativa HOM05D005792 ORTHO05D007171 3.6e-124 448.7 315 68.9
Nn5g30890 Nelumbo nucifera HOM05D005792 ORTHO05D007171 3.6e-124 448.7 316 68.0
Aqoxy6G01867 Aquilegia oxysepala HOM05D005792 ORTHO05D007171 6.1e-124 448.0 312 68.3
Ciclev10001939m.g Citrus clementina HOM05D005792 ORTHO05D007171 2.3e-123 446.0 312 70.8
Prupe.1G357300 Prunus persica HOM05D005792 ORTHO05D007171 2.3e-123 446.0 315 66.7
SalBow7G0964 Salvia bowleyana HOM05D005792 ORTHO05D007171 2.3e-123 446.0 297 72.7
TWI36G1625 Tripterygium wilfordii HOM05D005792 ORTHO05D007171 5.2e-123 444.9 315 67.9
Duzib093G0813 Durio zibethinus HOM05D005792 ORTHO05D007171 1.2e-122 443.7 315 67.6
Lsat_1_v5_gn_2_5940 Lactuca sativa HOM05D005792 ORTHO05D007171 1.5e-122 443.4 311 70.7
Atru.chr13.181 Acer truncatum HOM05D005792 ORTHO05D007171 2.6e-122 442.6 313 68.1
Thecc.08G054700 Theobroma cacao HOM05D005792 ORTHO05D007171 3.4e-122 442.2 311 69.1
Sc26g0004560 Simmondsia chinensis HOM05D005792 ORTHO05D007171 5.7e-122 441.4 308 68.8
AUR62013837 Chenopodium quinoa HOM05D005792 ORTHO05D007171 9.8e-122 440.7 309 66.0
CsaV3_2G024540 Cucumis sativus L. HOM05D005792 ORTHO05D007171 2.8e-121 439.1 315 66.3
Manes.05G141100 Manihot esculenta HOM05D005792 ORTHO05D007171 3.7e-121 438.7 309 68.6
Glyma.06G019900 Glycine max HOM05D005792 ORTHO05D007171 4.8e-121 438.3 312 67.6
Gohir.D05G256800 Gossypium hirsutum HOM05D005792 ORTHO05D007171 6.3e-121 438.0 315 68.3
Gorai.009G268300 Gossypium raimondii HOM05D005792 ORTHO05D007171 8.3e-121 437.6 315 68.3
Lj1g0011663 Lotus japonicus HOM05D005792 ORTHO05D007171 8.3e-121 437.6 315 68.3
MELO3C011330.2 Cucumis melo HOM05D005792 ORTHO05D007171 1.8e-120 436.4 324 64.5
FvH4_2g37800 Fragaria vesca HOM05D005792 ORTHO05D007171 2.4e-120 436.0 307 69.4
Sed0026749 Sechium edule HOM05D005792 ORTHO05D007171 2.4e-120 436.0 315 65.1
Ca_15448_v3 Cicer arietinum L. HOM05D005792 ORTHO05D007171 4.1e-120 435.3 315 67.0
MD08G1005200 Malus domestica HOM05D005792 ORTHO05D007171 4.1e-120 435.3 311 67.5
VMungo1309G0997 Vigna mungo HOM05D005792 ORTHO05D007171 4.1e-120 435.3 312 67.9
THA.LOC104813765 Tarenaya hassleriana HOM05D005792 ORTHO05D007171 7.0e-120 434.5 315 66.3
Cfa014030 Carpinus fangiana HOM05D000201 ORTHO05D004673 9.1e-120 434.1 286 74.5
PGR083G0297 Punica granatum HOM05D005792 ORTHO05D007171 1.2e-119 433.7 313 67.1
Lalb_Chr23g0265871 Lupinus albus HOM05D005792 ORTHO05D007171 1.6e-119 433.3 307 67.8
Psat5g010960 Pisum sativum HOM05D005792 ORTHO05D007171 1.6e-119 433.3 310 67.4
DCAR_016749 Daucus carota HOM05D005792 ORTHO05D007171 1.0e-118 430.6 368 59.0
Atru.chr13.183 Acer truncatum HOM05D005792 ORTHO05D007171 3.8e-118 428.7 315 65.1
PSO541G2987 Papaver somniferum HOM05D005792 ORTHO05D007171 3.8e-118 428.7 308 66.2
Glyma.04G019600 Glycine max HOM05D005792 ORTHO05D007171 5.0e-118 428.3 318 66.4
BcaC08g47286 Brassica carinata HOM05D005792 ORTHO05D007171 1.5e-117 426.8 315 65.1
Medtr3g115040 Medicago truncatula HOM05D005792 ORTHO05D007171 1.5e-117 426.8 311 67.2
Haze_22736 Corylus avellana HOM05D005792 ORTHO05D007171 1.9e-117 426.4 295 70.8
Thhalv10018917m.g Eutrema salsugineum HOM05D005792 ORTHO05D007171 5.5e-117 424.9 315 63.8
Sed0027939 Sechium edule HOM05D005792 ORTHO05D007171 9.5e-117 424.1 315 63.5
AT1G76150 Arabidopsis thaliana HOM05D005792 ORTHO05D007171 2.8e-116 422.5 315 64.4
AL2G36210 Arabidopsis lyrata HOM05D005792 ORTHO05D007171 3.6e-116 422.2 315 64.1
RcHm_v2.0_Chr6g0303911 Rosa chinensis HOM05D005792 ORTHO05D007171 4.7e-116 421.8 311 66.2
Carub.0002s2304 Capsella rubella HOM05D005792 ORTHO05D007171 1.8e-115 419.9 315 64.4
Sp5g31280 Schrenkiella parvula HOM05D005792 ORTHO05D007171 2.6e-114 416.0 316 63.9
arahy.Tifrunner.gnm1.ann1.NZM2IS Arachis hypogaea HOM05D005792 ORTHO05D007171 1.3e-113 413.7 337 60.5
CARHR069700 Cardamine hirsuta HOM05D005792 ORTHO05D007171 2.8e-113 412.5 315 63.5
Duzib116G0262 Durio zibethinus HOM05D005792 ORTHO05D007171 1.1e-112 410.6 282 68.1
C06p50100 Brassica napus HOM05D005792 ORTHO05D007171 1.8e-112 409.8 315 62.5
SGA_v2.0_scaffold351G49656 Striga asiatica HOM05D005792 ORTHO05D007171 1.8e-112 409.8 314 65.9
A07p41720 Brassica napus HOM05D005792 ORTHO05D007171 2.4e-112 409.5 315 63.2
Atru.chr1.2256 Acer truncatum HOM05D005792 ORTHO05D007171 2.7e-111 406.0 317 63.4
BraA07t31701Z Brassica rapa HOM05D005792 ORTHO05D007171 2.7e-111 406.0 315 62.9
BcaNung05119 Brassica carinata HOM05D005792 ORTHO05D007171 1.7e-110 403.3 315 62.2
Gohir.A05G255200 Gossypium hirsutum HOM05D005792 ORTHO05D007171 1.9e-109 399.8 320 64.7
TAR625G0413 Trochodendron aralioides HOM05D005792 ORTHO05D007171 7.3e-109 397.9 290 70.7
Aa31LG4G6270 Aethionema arabicum HOM05D005792 ORTHO05D007171 1.2e-108 397.1 315 60.0
MBI08_g05391_MAGBIO Magnolia biondii HOM05D005792 ORTHO05D007171 3.6e-108 395.6 288 67.4
Os09g0544900 Oryza sativa ssp. japonica HOM05D005792 ORTHO05D007171 1.7e-105 386.7 313 61.0
DCAR_013899 Daucus carota HOM05D005792 ORTHO05D007171 4.1e-104 382.1 313 61.3
BolC6t40050H Brassica oleracea HOM05D005792 ORTHO05D007171 7.0e-104 381.3 362 53.6
ClCG08G013930 Citrullus lanatus HOM05D005792 ORTHO05D007171 5.6e-101 371.7 355 53.5
FAN15G3656 Fragaria x ananassa HOM05D000201 ORTHO05D004673 6.2e-100 368.2 287 64.5
FAN27G1567 Fragaria x ananassa HOM05D000201 ORTHO05D004673 6.2e-100 368.2 287 64.8
Nitab4.5_0000588g0300 Nicotiana tabacum HOM05D005792 ORTHO05D007171 1.2e-98 364.0 311 60.1
Ah.11g040640 Amaranthus hybridus HOM05D005792 ORTHO05D007171 7.8e-95 351.3 308 56.8
Pp3c4_24330 Physcomitrium patens HOM05D005792 ORTHO05D007171 3.0e-94 349.4 319 54.5
PSO675G2870 Papaver somniferum HOM05D005792 ORTHO05D007171 1.5e-93 347.1 308 57.5
COL.COLO4_26053 Corchorus olitorius HOM05D005792 ORTHO05D007171 2.2e-89 333.2 311 55.3
BcaC08g47109 Brassica carinata HOM05D005792 ORTHO05D007171 6.4e-89 331.6 307 55.0
Haze_22722 Corylus avellana HOM05D005792 ORTHO05D007171 1.0e-86 324.3 287 59.9
AUR62036768 Chenopodium quinoa HOM05D005792 ORTHO05D007171 1.2e-84 317.4 288 56.2
SHI08027 Sapria himalayana HOM05D005792 ORTHO05D007171 8.1e-84 314.7 303 52.1
SMO174G0111 Selaginella moellendorffii HOM05D005792 ORTHO05D007171 1.5e-82 310.5 310 51.6
Phvul.009G020900 Phaseolus vulgaris HOM05D005792 ORTHO05D007171 4.6e-79 298.9 225 64.4
MSTRG.25290 Avicennia marina HOM05D005792 ORTHO05D007171 2.3e-78 296.6 193 69.4
Oeu021471.1 Olea europaea HOM05D005792 ORTHO05D007171 2.5e-77 293.1 209 66.0
Mapoly0135s0031 Marchantia polymorpha HOM05D005792 ORTHO05D007171 4.3e-77 292.4 314 48.7
Gohir.D02G118150 Gossypium hirsutum HOM05D005792 ORTHO05D007171 5.6e-77 292.0 227 63.4
Zm00001eb104070 Zea mays HOM05D005792 ORTHO05D007171 2.8e-76 289.7 229 61.6
SEGI_22358 Sequoiadendron giganteum HOM05D005792 ORTHO05D007171 1.8e-67 260.4 205 62.9
ATR0661G150 Amborella trichopoda HOM05D005792 ORTHO05D007171 4.0e-67 259.2 197 65.5
TAR625G0324 Trochodendron aralioides HOM05D005792 ORTHO05D007171 1.2e-66 257.7 171 74.9
Sabra02G0010800 Salix brachista HOM05D005792 ORTHO05D007171 1.3e-65 254.2 232 57.8
arahy.Tifrunner.gnm1.ann1.CIDL5D Arachis hypogaea HOM05D005792 ORTHO05D007171 1.7e-65 253.8 197 61.9
Actinidia17028 Actinidia chinensis HOM05D005792 ORTHO05D007171 3.0e-62 243.0 171 70.8
Zm00001eb321160 Zea mays HOM05D005792 ORTHO05D007171 1.3e-60 237.7 225 56.0
CBR_g50912 Chara braunii HOM05D005792 ORTHO05D007171 2.3e-54 216.9 405 35.3
CSS0030340 Camellia sinensis var. sinensis HOM05D005792 ORTHO05D007171 1.1e-51 208.0 131 81.7
CDE05G1591 Ceratophyllum demersum HOM05D005792 ORTHO05D007171 2.4e-51 206.8 152 61.8
AagrBONN_evm.TU.Sc2ySwM_117.3246 Anthoceros agrestis HOM05D005792 ORTHO05D007171 5.8e-50 202.2 213 50.7
TPR.G38109 Trifolium pratense HOM05D005792 ORTHO05D007171 5.8e-50 202.2 315 39.4
TPR.G753 Trifolium pratense HOM05D005792 ORTHO05D007171 2.8e-44 183.3 137 65.7
TAR625G0970 Trochodendron aralioides HOM05D005792 ORTHO05D007171 3.2e-40 169.9 113 73.5
Cre06.g308100 Chlamydomonas reinhardtii HOM05D005792 ORTHO05D007171 4.8e-36 156.0 311 32.5
Haze_26844 Corylus avellana HOM05D005792 ORTHO05D007171 4.5e-34 149.4 304 33.6
Hund05135 Selenicereus undatus HOM05D005792 ORTHO05D007171 1.9e-32 144.1 277 34.3
HPP92_014386 Vanilla planifolia HOM05D005792 ORTHO05D007171 1.9e-32 144.1 114 60.5
SalBow6G2635 Salvia bowleyana HOM05D005792 ORTHO05D007171 9.7e-29 131.7 81 76.5
CBR_g22029 Chara braunii HOM05D005792 ORTHO05D007171 9.4e-24 115.2 154 43.5
SMO174G0016 Selaginella moellendorffii HOM05D005792 ORTHO05D007171 4.5e-18 96.3 85 57.6
ATR0661G053 Amborella trichopoda HOM05D005792 ORTHO05D007171 6.7e-14 82.4 53 71.7
Sabra02G0010700 Salix brachista HOM05D000201 ORTHO05D000490 1.5e-13 81.3 64 62.5
COL.COLO4_12452 Corchorus olitorius HOM05D005792 ORTHO05D007171 1.3e-12 78.2 71 54.9
SMO174G0053 Selaginella moellendorffii HOM05D005792 ORTHO05D007171 1.1e-11 75.1 80 51.2
SEGI_02138 Sequoiadendron giganteum HOM05D005792 ORTHO05D007171 2.7e-10 70.5 46 65.2
Mapoly0033s0029 Marchantia polymorpha HOM05D005792 ORTHO05D007171 2.1e-07 60.8 55 47.3
Cpa.g.sc26.236 Carica papaya HOM05D005792 ORTHO05D007171 1.8e-06 57.8 36 77.8


User provided reference genes

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