Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0016811 Camellia sinensis var. sinensis HOM05D001551 ORTHO05D005859 5.3e-65 250.8 117 100.0
Actinidia08913 Actinidia chinensis HOM05D001551 ORTHO05D005859 2.4e-33 145.6 86 81.4
Actinidia36846 Actinidia chinensis HOM05D001551 ORTHO05D005859 2.4e-33 145.6 86 81.4
Actinidia25511 Actinidia chinensis HOM05D001551 ORTHO05D005859 3.1e-33 145.2 81 84.0
Actinidia18288 Actinidia chinensis HOM05D001551 ORTHO05D005859 4.1e-33 144.8 83 83.1
CSS0002484 Camellia sinensis var. sinensis HOM05D001551 ORTHO05D005859 9.2e-33 143.7 83 81.9
CSS0038575 Camellia sinensis var. sinensis HOM05D001551 ORTHO05D005859 9.2e-33 143.7 83 81.9
Lsat_1_v5_gn_5_9381 Lactuca sativa HOM05D001551 ORTHO05D005859 9.2e-33 143.7 80 85.0
Solyc06g068760.3 Solanum lycopersicum HOM05D001551 ORTHO05D005859 1.2e-32 143.3 86 80.2
Sopen06g026040 Solanum pennellii HOM05D001551 ORTHO05D005859 1.2e-32 143.3 86 80.2
Rhsim12G0181300 Rhododendron simsii HOM05D001551 ORTHO05D005859 2.7e-32 142.1 86 79.1
PGSC0003DMG400025575 Solanum tuberosum HOM05D001551 ORTHO05D005859 2.7e-32 142.1 86 79.1
vmacro16761 Vaccinium macrocarpon HOM05D001551 ORTHO05D005859 3.5e-32 141.7 86 80.2
MSTRG.22814 Avicennia marina HOM05D001551 ORTHO05D005859 4.5e-32 141.4 83 80.7
Nitab4.5_0007345g0100 Nicotiana tabacum HOM05D001551 ORTHO05D005859 5.9e-32 141.0 86 77.9
Peaxi162Scf00207g00254 Petunia axillaris HOM05D001551 ORTHO05D005859 5.9e-32 141.0 84 79.8
CAN.G1089.16 Capsicum annuum HOM05D001551 ORTHO05D005859 7.8e-32 140.6 86 77.9
Dinv13710 Davidia involucrata HOM05D001551 ORTHO05D005859 1.3e-31 139.8 83 80.7
Migut.I00664 Erythranthe guttata HOM05D001551 ORTHO05D005859 1.7e-31 139.4 83 79.5
Nitab4.5_0012775g0030 Nicotiana tabacum HOM05D001551 ORTHO05D005859 1.7e-31 139.4 86 76.7
SalBow7G1162 Salvia bowleyana HOM05D001551 ORTHO05D005859 1.7e-31 139.4 83 78.3
Cc04_g05770 Coffea canephora HOM05D001551 ORTHO05D005859 2.3e-31 139.0 83 78.3
HanXRQChr05g0155371 Helianthus annuus HOM05D001551 ORTHO05D005859 2.9e-31 138.7 80 82.5
Lj9C488G12 Lonicera japonica HOM05D001551 ORTHO05D005859 2.9e-31 138.7 83 79.5
vmacro19115 Vaccinium macrocarpon HOM05D001551 ORTHO05D005859 5.0e-31 137.9 83 79.5
MBI07_g13940_MAGBIO Magnolia biondii HOM05D001551 ORTHO05D005859 8.6e-31 137.1 76 81.6
SGA_v2.0_scaffold37G14673 Striga asiatica HOM05D001551 ORTHO05D005859 1.1e-30 136.7 83 78.3
Dinv23235 Davidia involucrata HOM05D001551 ORTHO05D005859 1.5e-30 136.3 83 77.1
Rhsim08G0198700 Rhododendron simsii HOM05D001551 ORTHO05D005859 1.9e-30 136.0 80 81.2
arahy.Tifrunner.gnm1.ann1.D8JD58 Arachis hypogaea HOM05D001551 ORTHO05D005859 4.3e-30 134.8 82 79.3
arahy.Tifrunner.gnm1.ann1.Q2CTBB Arachis hypogaea HOM05D001551 ORTHO05D005859 4.3e-30 134.8 82 79.3
Hma1.2p1_0577F.1_g182180 Hydrangea macrophylla HOM05D001551 ORTHO05D005859 9.5e-30 133.7 79 79.7
Oeu051186.2 Olea europaea HOM05D001551 ORTHO05D005859 2.1e-29 132.5 80 77.5
Lj1g0018460 Lotus japonicus HOM05D001551 ORTHO05D005859 6.1e-29 131.0 82 76.8
AUR62043378 Chenopodium quinoa HOM05D001551 ORTHO05D005859 8.0e-29 130.6 78 80.8
MD06G1129000 Malus domestica HOM05D001551 ORTHO05D005859 8.0e-29 130.6 82 76.8
MD14G1145900 Malus domestica HOM05D001551 ORTHO05D005859 8.0e-29 130.6 82 76.8
Potri.012G109800 Populus trichocarpa HOM05D001551 ORTHO05D005859 8.0e-29 130.6 82 76.8
FvH4_5g09710 Fragaria vesca HOM05D001551 ORTHO05D005859 1.0e-28 130.2 81 77.8
FAN04G0171 Fragaria x ananassa HOM05D001551 ORTHO05D005859 1.0e-28 130.2 81 77.8
FAN08G3006 Fragaria x ananassa HOM05D001551 ORTHO05D005859 1.0e-28 130.2 81 77.8
FAN13G0525 Fragaria x ananassa HOM05D001551 ORTHO05D005859 1.0e-28 130.2 81 77.8
FAN18G2118 Fragaria x ananassa HOM05D001551 ORTHO05D005859 1.0e-28 130.2 81 77.8
Lalb_Chr08g0237601 Lupinus albus HOM05D001551 ORTHO05D005859 1.4e-28 129.8 82 75.6
RcHm_v2.0_Chr7g0188531 Rosa chinensis HOM05D001551 ORTHO05D005859 1.4e-28 129.8 81 77.8
Duzib205G1491 Durio zibethinus HOM05D001551 ORTHO05D005859 1.8e-28 129.4 82 74.4
Glyma.04G202400 Glycine max HOM05D001551 ORTHO05D005859 1.8e-28 129.4 82 75.6
Glyma.06G163100 Glycine max HOM05D001551 ORTHO05D005859 1.8e-28 129.4 82 75.6
Ca_10874_v3 Cicer arietinum L. HOM05D001551 ORTHO05D005859 2.3e-28 129.0 82 75.6
Prupe.5G140300 Prunus persica HOM05D001551 ORTHO05D005859 2.3e-28 129.0 82 76.8
Sc04g0000180 Simmondsia chinensis HOM05D001551 ORTHO05D005859 2.3e-28 129.0 84 72.6
TAR629G2635 Trochodendron aralioides HOM05D001551 ORTHO05D005859 2.3e-28 129.0 82 75.6
Sabra12G0080000 Salix brachista HOM05D001551 ORTHO05D005859 3.0e-28 128.6 82 75.6
CARHR257170 Cardamine hirsuta HOM05D001551 ORTHO05D005859 4.0e-28 128.3 79 78.5
Sp7g23070 Schrenkiella parvula HOM05D001551 ORTHO05D005859 4.0e-28 128.3 79 77.2
Cpa.g.sc2215.3 Carica papaya HOM05D001551 ORTHO05D005859 5.2e-28 127.9 82 74.4
CiPaw.12G000400 Carya illinoinensis HOM05D001551 ORTHO05D005859 5.2e-28 127.9 86 70.9
EL10Ac5g11272 Beta vulgaris HOM05D001551 ORTHO05D005859 6.8e-28 127.5 78 78.2
TWI23G1313 Tripterygium wilfordii HOM05D001551 ORTHO05D005859 6.8e-28 127.5 82 75.6
Thhalv10025970m.g Eutrema salsugineum HOM05D001551 ORTHO05D005859 8.9e-28 127.1 80 75.0
Phvul.009G160500 Phaseolus vulgaris HOM05D001551 ORTHO05D005859 8.9e-28 127.1 82 73.2
GSVIVG01008663001 Vitis vinifera HOM05D001551 ORTHO05D005859 8.9e-28 127.1 86 70.9
Psat5g055440 Pisum sativum HOM05D001551 ORTHO05D005859 1.2e-27 126.7 81 74.1
TPR.G16934 Trifolium pratense HOM05D001551 ORTHO05D005859 1.2e-27 126.7 79 75.9
AL8G25230 Arabidopsis lyrata HOM05D001551 ORTHO05D005859 1.5e-27 126.3 79 77.2
AT5G51020 Arabidopsis thaliana HOM05D001551 ORTHO05D005859 1.5e-27 126.3 79 77.2
Carub.0008s1102 Capsella rubella HOM05D001551 ORTHO05D005859 1.5e-27 126.3 79 77.2
Haze_07088 Corylus avellana HOM05D001551 ORTHO05D005859 1.5e-27 126.3 84 71.4
Medtr3g098510 Medicago truncatula HOM05D001551 ORTHO05D005859 1.5e-27 126.3 79 75.9
Thecc.03G141800 Theobroma cacao HOM05D001551 ORTHO05D005859 1.5e-27 126.3 82 73.2
Cfa018698 Carpinus fangiana HOM05D001551 ORTHO05D005859 2.0e-27 125.9 83 72.3
Gohir.A03G055800 Gossypium hirsutum HOM05D001551 ORTHO05D005859 2.0e-27 125.9 86 69.8
Gorai.003G117100 Gossypium raimondii HOM05D001551 ORTHO05D005859 2.0e-27 125.9 86 69.8
PSO017G1738 Papaver somniferum HOM05D001551 ORTHO05D005859 2.0e-27 125.9 82 74.4
PGR044G0460 Punica granatum HOM05D001551 ORTHO05D005859 2.0e-27 125.9 82 73.2
BcaC09g50811 Brassica carinata HOM05D001551 ORTHO05D005859 2.6e-27 125.6 79 75.9
BcaNung03998 Brassica carinata HOM05D001551 ORTHO05D005859 2.6e-27 125.6 79 75.9
A01p16340 Brassica napus HOM05D001551 ORTHO05D005859 2.6e-27 125.6 79 75.9
C01p20490 Brassica napus HOM05D001551 ORTHO05D005859 2.6e-27 125.6 79 75.9
BraA01t01589Z Brassica rapa HOM05D001551 ORTHO05D005859 2.6e-27 125.6 79 75.9
COL.COLO4_37269 Corchorus olitorius HOM05D001551 ORTHO05D005859 2.6e-27 125.6 80 73.8
Os11g0524300 Oryza sativa ssp. japonica HOM05D001551 ORTHO05D005859 3.4e-27 125.2 82 72.0
QL10p000300 Quercus lobata HOM05D001551 ORTHO05D005859 3.4e-27 125.2 82 73.2
Sp6g13170 Schrenkiella parvula HOM05D001551 ORTHO05D005859 3.4e-27 125.2 79 75.9
TAR371G0091 Trochodendron aralioides HOM05D001551 ORTHO05D005859 3.4e-27 125.2 82 72.0
Zm00001eb170550 Zea mays HOM05D001551 ORTHO05D005859 3.4e-27 125.2 82 73.2
BraA03t10931Z Brassica rapa HOM05D001551 ORTHO05D005859 4.4e-27 124.8 79 74.7
Ciclev10032408m.g Citrus clementina HOM05D001551 ORTHO05D005859 4.4e-27 124.8 79 74.7
Cfa018920 Carpinus fangiana HOM05D001551 ORTHO05D005859 5.8e-27 124.4 83 69.9
Gohir.D03G110700 Gossypium hirsutum HOM05D001551 ORTHO05D005859 5.8e-27 124.4 86 68.6
Nn3g16260 Nelumbo nucifera HOM05D001551 ORTHO05D005859 5.8e-27 124.4 82 74.4
THA.LOC104811554 Tarenaya hassleriana HOM05D001551 ORTHO05D005859 5.8e-27 124.4 79 74.7
Manes.14G043800 Manihot esculenta HOM05D001551 ORTHO05D005859 7.5e-27 124.0 82 74.4
Haze_07303 Corylus avellana HOM05D006543 ORTHO05D008308 9.8e-27 123.6 83 69.9
PSO478G5149 Papaver somniferum HOM05D001551 ORTHO05D005859 9.8e-27 123.6 82 73.2
Aqoxy5G03068 Aquilegia oxysepala HOM05D001551 ORTHO05D005859 1.3e-26 123.2 77 76.6
BolC1t01980H Brassica oleracea HOM05D001551 ORTHO05D005859 1.3e-26 123.2 79 74.7
Eucgr.K02189 Eucalyptus grandis HOM05D001551 ORTHO05D005859 1.3e-26 123.2 78 74.4
Thhalv10014437m.g Eutrema salsugineum HOM05D001551 ORTHO05D005859 1.3e-26 123.2 79 75.9
Atru.chr6.1937 Acer truncatum HOM05D001551 ORTHO05D005859 2.2e-26 122.5 79 73.4
Aa31LG3G7480 Aethionema arabicum HOM05D001551 ORTHO05D005859 2.9e-26 122.1 79 74.7
Gohir.A11G038800 Gossypium hirsutum HOM05D001551 ORTHO05D005859 8.3e-26 120.6 78 71.8
AUR62032208 Chenopodium quinoa HOM05D001551 ORTHO05D005859 1.9e-25 119.4 96 65.6
THA.LOC104808046 Tarenaya hassleriana HOM05D001551 ORTHO05D005859 1.9e-25 119.4 78 74.4
Hund10026 Selenicereus undatus HOM05D001551 ORTHO05D005859 2.4e-25 119.0 79 70.9
unitig_27.g25103 Utricularia gibba HOM05D001551 ORTHO05D005859 2.4e-25 119.0 79 73.4
Gorai.007G045200 Gossypium raimondii HOM05D001551 ORTHO05D005859 4.1e-25 118.2 78 69.2
Gohir.D11G042000 Gossypium hirsutum HOM05D001551 ORTHO05D005859 5.4e-25 117.9 78 69.2
SGA_v2.0_scaffold5G02806 Striga asiatica HOM05D001551 ORTHO05D005859 2.7e-24 115.5 74 74.3
BcaC01g06112 Brassica carinata HOM05D001551 ORTHO05D005859 3.5e-24 115.2 78 69.2
ClCG03G004050 Citrullus lanatus HOM05D001551 ORTHO05D005859 3.5e-24 115.2 82 67.1
MELO3C002387.2 Cucumis melo HOM05D001551 ORTHO05D005859 3.5e-24 115.2 82 67.1
CsaV3_1G009930 Cucumis sativus L. HOM05D001551 ORTHO05D005859 3.5e-24 115.2 82 67.1
A03p16410 Brassica napus HOM05D001551 ORTHO05D005859 4.6e-24 114.8 104 56.7
AagrBONN_evm.TU.Sc2ySwM_368.1985 Anthoceros agrestis HOM05D001551 ORTHO05D005859 7.8e-24 114.0 82 59.8
Sed0027340 Sechium edule HOM05D001551 ORTHO05D005859 1.7e-23 112.8 81 66.7
Pp3c6_23000 Physcomitrium patens HOM05D001551 ORTHO05D005859 2.3e-23 112.5 78 62.8
CDE02G1325 Ceratophyllum demersum HOM05D001551 ORTHO05D005859 3.0e-23 112.1 79 69.6
Mapoly0002s0145 Marchantia polymorpha HOM05D001551 ORTHO05D005859 3.9e-23 111.7 82 59.8
SMO118G0459 Selaginella moellendorffii HOM05D001551 ORTHO05D005859 6.6e-23 110.9 79 63.3
SEGI_34423 Sequoiadendron giganteum HOM05D001551 ORTHO05D005859 8.6e-23 110.5 78 65.4
Sed0019000 Sechium edule HOM05D001551 ORTHO05D005859 1.5e-22 109.8 83 63.9
Pp3c5_10130 Physcomitrium patens HOM05D001551 ORTHO05D005859 4.3e-22 108.2 79 59.5
Manes.06G127400 Manihot esculenta HOM05D001551 ORTHO05D005859 1.6e-21 106.3 76 69.7
DCAR_025640 Daucus carota HOM05D001551 ORTHO05D005859 6.8e-20 100.9 83 66.3
CBR_g30803 Chara braunii HOM05D001551 ORTHO05D005859 2.2e-18 95.9 76 55.3
Pp3c16_270 Physcomitrium patens HOM05D001551 ORTHO05D005859 3.7e-18 95.1 60 66.7
TWI39G0428 Tripterygium wilfordii HOM05D001551 ORTHO05D005859 2.4e-17 92.4 81 63.0
AUR62011939 Chenopodium quinoa HOM05D001551 ORTHO05D005859 2.1e-16 89.4 72 65.3
AUR62043863 Chenopodium quinoa HOM05D001551 ORTHO05D005859 1.0e-15 87.0 49 83.7
HanXRQChr05g0130591 Helianthus annuus HOM05D001551 ORTHO05D005859 1.0e-15 87.0 52 75.0
MBI07_g35983_MAGBIO Magnolia biondii HOM05D001551 ORTHO05D005859 2.3e-15 85.9 48 83.3
MBI07_g48061_MAGBIO Magnolia biondii HOM05D001551 ORTHO05D005859 2.3e-15 85.9 48 83.3
HPP92_009738 Vanilla planifolia HOM05D001551 ORTHO05D005859 3.0e-15 85.5 54 75.9
Duzib084G0881 Durio zibethinus HOM05D001551 ORTHO05D005859 5.6e-14 81.3 52 71.2
Sc04g0000130 Simmondsia chinensis HOM05D001551 ORTHO05D005859 2.8e-13 79.0 49 71.4
FvH4_6g04500 Fragaria vesca HOM05D001551 ORTHO05D005859 4.7e-13 78.2 53 73.6
CDE06G0746 Ceratophyllum demersum HOM05D001551 ORTHO05D005859 1.2e-11 73.6 79 54.4
Psat5g306440 Pisum sativum HOM05D001551 ORTHO05D006558 1.5e-11 73.2 54 70.4
BcaC01g06064 Brassica carinata HOM05D001551 ORTHO05D005859 3.2e-09 65.5 49 65.3
Hund02515 Selenicereus undatus HOM05D001551 ORTHO05D005859 7.3e-06 54.3 35 77.1


User provided reference genes

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