Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0016785 Camellia sinensis var. sinensis HOM05D006771 ORTHO05D008296 1.8e-193 679.1 347 100.0
CSS0032707 Camellia sinensis var. sinensis HOM05D006771 ORTHO05D008296 9.3e-150 533.9 354 80.8
Dinv36762 Davidia involucrata HOM05D006771 ORTHO05D008296 1.2e-67 261.2 476 40.1
Rhsim03G0232900 Rhododendron simsii HOM05D006771 ORTHO05D008296 6.6e-55 218.8 541 36.0
Actinidia29883 Actinidia chinensis HOM05D006771 ORTHO05D008296 1.9e-54 217.2 410 40.7
QL02p062800 Quercus lobata HOM05D006771 ORTHO05D008296 9.6e-46 188.3 467 33.0
vmacro23430 Vaccinium macrocarpon HOM05D006771 ORTHO05D008296 2.4e-44 183.7 533 31.5
Ciclev10010605m.g Citrus clementina HOM05D006771 ORTHO05D008296 1.2e-43 181.4 418 34.9
vmacro06287 Vaccinium macrocarpon HOM05D006771 ORTHO05D008296 6.5e-42 175.6 556 30.8
FAN28G0978 Fragaria x ananassa HOM05D006771 ORTHO05D008296 2.5e-38 163.7 406 31.8
FAN23G2606 Fragaria x ananassa HOM05D006771 ORTHO05D008296 9.6e-38 161.8 408 31.9
FAN26G2123 Fragaria x ananassa HOM05D006771 ORTHO05D008296 1.6e-37 161.0 407 32.2
FAN26G3254 Fragaria x ananassa HOM05D006771 ORTHO05D008296 6.2e-37 159.1 405 31.6
FvH4_1g07370 Fragaria vesca HOM05D006771 ORTHO05D008296 1.4e-36 157.9 403 32.8
GSVIVG01015209001 Vitis vinifera HOM05D006771 ORTHO05D008296 1.8e-36 157.5 476 32.6
RcHm_v2.0_Chr2g0093251 Rosa chinensis HOM05D006771 ORTHO05D008296 5.8e-35 152.5 408 32.8
Eucgr.C03649 Eucalyptus grandis HOM05D006771 ORTHO05D008296 1.3e-34 151.4 454 30.4
Prupe.7G210300 Prunus persica HOM05D006771 ORTHO05D008296 1.3e-34 151.4 433 32.8
Manes.03G033100 Manihot esculenta HOM05D006771 ORTHO05D008296 2.2e-34 150.6 369 32.5
Cfa003093 Carpinus fangiana HOM05D006771 ORTHO05D008296 3.8e-34 149.8 455 29.0
Eucgr.C03893 Eucalyptus grandis HOM05D006771 ORTHO05D008296 2.5e-33 147.1 449 29.6
FAN19G1581 Fragaria x ananassa HOM05D006771 ORTHO05D008296 2.7e-32 143.7 383 31.6
MD15G1206500 Malus domestica HOM05D006771 ORTHO05D008296 2.7e-32 143.7 406 31.0
Atru.chr7.1582 Acer truncatum HOM05D006771 ORTHO05D008296 3.9e-31 139.8 243 40.3
TAR624G0646 Trochodendron aralioides HOM05D006771 ORTHO05D008296 7.4e-30 135.6 573 27.4
CANSAT56G0603 Cannabis sativa HOM05D006771 ORTHO05D008296 1.3e-29 134.8 366 31.1
CiPaw.03G216900 Carya illinoinensis HOM05D006771 ORTHO05D008296 3.7e-29 133.3 451 28.2
Thecc.09G090100 Theobroma cacao HOM05D006771 ORTHO05D008296 1.4e-28 131.3 440 30.2
Duzib187G1830 Durio zibethinus HOM05D006771 ORTHO05D008296 3.8e-26 123.2 469 29.6
PGR102G2735 Punica granatum HOM05D006771 ORTHO05D008296 2.5e-25 120.6 386 29.3
Cc06_g11360 Coffea canephora HOM05D006771 ORTHO05D008296 5.5e-25 119.4 259 34.7
Potri.006G151100 Populus trichocarpa HOM05D006771 ORTHO05D008296 1.2e-24 118.2 494 26.7
Gohir.A06G072300 Gossypium hirsutum HOM05D006771 ORTHO05D008296 1.6e-24 117.9 457 29.1
COL.COLO4_18206 Corchorus olitorius HOM05D006771 ORTHO05D008296 3.6e-24 116.7 404 29.5
MBI04_g34126_MAGBIO Magnolia biondii HOM05D006771 ORTHO05D008296 7.9e-24 115.5 409 28.1
Nn8g38880 Nelumbo nucifera HOM05D006771 ORTHO05D008296 1.4e-23 114.8 443 28.7
TWI63G0991 Tripterygium wilfordii HOM05D006771 ORTHO05D008296 1.4e-23 114.8 523 27.0
Cpa.g.sc93.24 Carica papaya HOM05D006771 ORTHO05D008296 5.1e-23 112.8 439 27.6
Gorai.010G082600 Gossypium raimondii HOM05D006771 ORTHO05D008296 6.7e-23 112.5 457 29.5
Gohir.D06G070900 Gossypium hirsutum HOM05D006771 ORTHO05D008296 1.1e-22 111.7 459 28.5
Sabra06G0119600 Salix brachista HOM05D006771 ORTHO05D008296 4.3e-22 109.8 545 25.3
DCAR_024688 Daucus carota HOM05D006771 ORTHO05D008296 8.2e-21 105.5 425 28.0
MELO3C004623.2 Cucumis melo HOM05D006771 ORTHO05D008296 2.6e-19 100.5 424 25.7
SalBow1G1031 Salvia bowleyana HOM05D006771 ORTHO05D008296 3.4e-19 100.1 460 27.4
Gohir.A07G010700 Gossypium hirsutum HOM05D006771 ORTHO05D008296 5.9e-19 99.4 183 38.3
Gorai.001G011400 Gossypium raimondii HOM05D006771 ORTHO05D008296 5.9e-19 99.4 160 40.6
CsaV3_2G001480 Cucumis sativus L. HOM05D006771 ORTHO05D008296 7.7e-19 99.0 413 26.9
Solyc07g039190.4 Solanum lycopersicum HOM05D006771 ORTHO05D008296 1.0e-18 98.6 476 26.3
Gohir.D07G011000 Gossypium hirsutum HOM05D006771 ORTHO05D008296 1.3e-18 98.2 160 40.0
DCAR_031968 Daucus carota HOM05D006771 ORTHO05D008296 1.1e-17 95.1 460 27.2
Sed0013958 Sechium edule HOM05D006771 ORTHO05D008296 1.4e-17 94.7 477 23.3
Oeu042645.4 Olea europaea HOM05D006771 ORTHO05D008296 4.2e-17 93.2 455 26.6
Duzib168G0935 Durio zibethinus HOM05D006771 ORTHO05D008296 9.4e-17 92.0 220 35.9
PGSC0003DMG401013152 Solanum tuberosum HOM05D006771 ORTHO05D008296 1.6e-16 91.3 496 25.2
ClCG11G001770 Citrullus lanatus HOM05D006771 ORTHO05D008296 1.4e-15 88.2 458 25.8
HanXRQChr12g0354831 Helianthus annuus HOM05D006771 ORTHO05D008296 1.8e-15 87.8 367 26.2
arahy.Tifrunner.gnm1.ann1.H0G9IY Arachis hypogaea HOM05D006771 ORTHO05D008296 2.3e-15 87.4 351 28.8
CAN.G235.1 Capsicum annuum HOM05D006771 ORTHO05D008296 3.0e-15 87.0 482 24.9
SGA_v2.0_scaffold21G09363 Striga asiatica HOM05D006771 ORTHO05D008296 1.1e-14 85.1 312 29.8
Migut.L01489 Erythranthe guttata HOM05D006771 ORTHO05D008296 4.4e-14 83.2 111 41.4
Lsat_1_v5_gn_5_142241 Lactuca sativa HOM05D006771 ORTHO05D008296 5.7e-14 82.8 297 29.0
arahy.Tifrunner.gnm1.ann1.LUTY24 Arachis hypogaea HOM05D006771 ORTHO05D008296 7.4e-14 82.4 342 26.9
ECA234G3532 Erigeron canadensis HOM05D006771 ORTHO05D008296 1.3e-13 81.6 55 63.6
Actinidia29884 Actinidia chinensis HOM05D006771 ORTHO05D008296 1.7e-13 81.3 114 45.6
EL10Ac8g19225 Beta vulgaris HOM05D006771 ORTHO05D008296 3.1e-12 77.0 171 30.4
Nitab4.5_0005634g0020 Nicotiana tabacum HOM05D006771 ORTHO05D008296 3.1e-12 77.0 48 70.8
Hund06680 Selenicereus undatus HOM05D006771 ORTHO05D008296 3.1e-12 77.0 224 29.0
TPR.G35458 Trifolium pratense HOM05D006771 ORTHO05D008296 3.1e-12 77.0 303 27.7
CDE06G0351 Ceratophyllum demersum HOM05D006771 ORTHO05D008296 7.0e-12 75.9 141 31.9
Psat1g141720 Pisum sativum HOM05D006771 ORTHO05D008296 1.2e-11 75.1 325 25.2
unitig_699.g19301 Utricularia gibba HOM05D006771 ORTHO05D008296 1.5e-11 74.7 104 40.4
Sc18g0002030 Simmondsia chinensis HOM05D006771 ORTHO05D008296 2.0e-11 74.3 51 64.7
HanXRQChr10g0319291 Helianthus annuus HOM05D006771 ORTHO05D008296 2.6e-11 73.9 74 47.3
Medtr2g038710 Medicago truncatula HOM05D006771 ORTHO05D008296 2.6e-11 73.9 394 25.9
Aqoxy7G01223_Aqoxy7G01224 Aquilegia oxysepala HOM05D006771 ORTHO05D008296 3.5e-11 73.6 51 66.7
Nitab4.5_0005033g0010 Nicotiana tabacum HOM05D006771 ORTHO05D008296 3.5e-11 73.6 174 35.1
Ca_02153_v3 Cicer arietinum L. HOM05D006771 ORTHO05D008296 4.5e-11 73.2 191 29.8
Lalb_Chr08g0232051 Lupinus albus HOM05D006771 ORTHO05D008296 2.5e-09 67.4 53 56.6
Glyma.15G169200 Glycine max HOM05D006771 ORTHO05D008296 3.2e-09 67.0 264 28.4
Peaxi162Scf01121g00112 Petunia axillaris HOM05D006771 ORTHO05D008296 3.2e-09 67.0 46 67.4
Ah.14g085210 Amaranthus hybridus HOM05D006771 ORTHO05D008296 4.2e-09 66.6 179 27.4
Sopen07g017540 Solanum pennellii HOM05D006771 ORTHO05D008296 4.2e-09 66.6 281 27.4
ATR0716G111 Amborella trichopoda HOM05D006771 ORTHO05D008296 7.2e-09 65.9 54 46.3
AUR62027498 Chenopodium quinoa HOM05D006771 ORTHO05D008296 7.2e-09 65.9 163 31.3
PSO063G0725 Papaver somniferum HOM05D006771 ORTHO05D008296 7.2e-09 65.9 160 35.0
PSO832G0455 Papaver somniferum HOM05D006771 ORTHO05D008296 2.1e-08 64.3 171 32.2
Glyma.09G062700 Glycine max HOM05D006771 ORTHO05D008296 2.7e-08 63.9 289 25.6
AagrBONN_evm.TU.Sc2ySwM_344.5001 Anthoceros agrestis HOM05D062329 ORTHO05D008296 4.0e-07 60.1 40 65.0
Phvul.009G232800 Phaseolus vulgaris HOM05D006771 ORTHO05D008296 5.2e-07 59.7 320 25.3
Pp3c15_7000 Physcomitrium patens HOM05D006771 ORTHO05D008296 8.8e-07 58.9 47 53.2
MD02G1078500 Malus domestica HOM05D006771 ORTHO05D008296 1.1e-06 58.5 268 26.1
Lalb_Chr08g0232041 Lupinus albus HOM05D006771 ORTHO05D008296 2.0e-06 57.8 192 28.6
AL8G32700 Arabidopsis lyrata HOM05D006771 ORTHO05D008296 3.3e-06 57.0 51 49.0
Pp3c9_2800 Physcomitrium patens HOM05D006771 ORTHO05D008296 3.3e-06 57.0 55 45.5
Pp3c9_2809 Physcomitrium patens HOM05D006771 ORTHO05D008296 3.3e-06 57.0 55 45.5
Os05g0232200 Oryza sativa ssp. japonica HOM05D006771 ORTHO05D008296 4.4e-06 56.6 324 25.9
VMungo1309G1333 Vigna mungo HOM05D006771 ORTHO05D008296 4.4e-06 56.6 171 29.8
Lj6g0004334 Lotus japonicus HOM05D006771 ORTHO05D008296 5.7e-06 56.2 228 25.4
AT5G56850 Arabidopsis thaliana HOM05D006771 ORTHO05D008296 7.5e-06 55.8 165 30.3


User provided reference genes

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