Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0016783 Camellia sinensis var. sinensis HOM05D003450 ORTHO05D004150 2.3e-202 708.8 370 100.0
CSS0002385 Camellia sinensis var. sinensis HOM05D003450 ORTHO05D004150 8.7e-162 573.9 369 80.8
CSS0024266 Camellia sinensis var. sinensis HOM05D003450 ORTHO05D004150 2.6e-158 562.4 369 83.2
Dinv37611 Davidia involucrata HOM05D003450 ORTHO05D004150 8.7e-154 547.4 369 76.7
vmacro11398 Vaccinium macrocarpon HOM05D003450 ORTHO05D004150 1.2e-150 537.0 369 76.4
GSVIVG01000649001 Vitis vinifera HOM05D003450 ORTHO05D004150 2.0e-150 536.2 369 75.9
Hma1.2p1_1136F.1_g260470 Hydrangea macrophylla HOM05D003450 ORTHO05D004150 1.8e-146 523.1 361 73.4
QL02p074015 Quercus lobata HOM05D003450 ORTHO05D004150 3.0e-146 522.3 369 72.4
Cfa007340 Carpinus fangiana HOM05D003450 ORTHO05D004150 8.7e-146 520.8 369 72.9
CiPaw.09G022500 Carya illinoinensis HOM05D003450 ORTHO05D004150 3.3e-145 518.8 369 72.4
Hma1.2p1_1136F.1_g260480 Hydrangea macrophylla HOM05D003450 ORTHO05D004150 4.3e-145 518.5 358 73.2
Haze_14757 Corylus avellana HOM05D003450 ORTHO05D004150 4.8e-144 515.0 369 72.9
Duzib264G1290 Durio zibethinus HOM05D003450 ORTHO05D004150 6.2e-144 514.6 369 72.9
CSS0021042 Camellia sinensis var. sinensis HOM05D003450 ORTHO05D004150 2.4e-143 512.7 369 78.3
Cc08_g15080 Coffea canephora HOM05D003450 ORTHO05D004150 6.9e-143 511.1 369 72.1
Manes.15G151800 Manihot esculenta HOM05D003450 ORTHO05D004150 6.9e-143 511.1 369 72.4
Potri.001G343500 Populus trichocarpa HOM05D003450 ORTHO05D004150 9.0e-143 510.8 369 71.5
Thecc.04G019300 Theobroma cacao HOM05D003450 ORTHO05D004150 1.2e-142 510.4 369 71.5
CSS0048429 Camellia sinensis var. sinensis HOM05D003450 ORTHO05D004150 1.5e-142 510.0 369 77.5
Sabra16G0222800 Salix brachista HOM05D003450 ORTHO05D004150 4.5e-142 508.4 369 71.3
TWI56G0323 Tripterygium wilfordii HOM05D003450 ORTHO05D004150 8.4e-141 504.2 369 71.8
Lj5C248G9 Lonicera japonica HOM05D003450 ORTHO05D004150 4.2e-140 501.9 372 71.0
Gorai.012G065100 Gossypium raimondii HOM05D003450 ORTHO05D004150 2.1e-139 499.6 369 71.0
QL03p035003 Quercus lobata HOM05D003450 ORTHO05D004150 3.0e-138 495.7 369 69.4
Peaxi162Scf00074g01921 Petunia axillaris HOM05D003450 ORTHO05D004150 3.9e-138 495.4 369 71.3
Oeu042349.1 Olea europaea HOM05D003450 ORTHO05D004150 1.1e-137 493.8 369 70.2
Gohir.A05G354700 Gossypium hirsutum HOM05D003450 ORTHO05D004150 2.5e-137 492.7 369 70.5
Oeu059564.1 Olea europaea HOM05D003450 ORTHO05D004150 4.3e-137 491.9 369 69.6
Manes.17G111200 Manihot esculenta HOM05D003450 ORTHO05D004150 1.4e-135 486.9 369 69.1
Nitab4.5_0002282g0060 Nicotiana tabacum HOM05D003450 ORTHO05D004150 1.4e-135 486.9 371 71.2
Duzib147G0628 Durio zibethinus HOM05D003450 ORTHO05D004150 3.1e-135 485.7 370 69.2
ClCG09G019370 Citrullus lanatus HOM05D003450 ORTHO05D004150 1.2e-134 483.8 369 69.9
Ciclev10014189m.g Citrus clementina HOM05D003450 ORTHO05D004150 1.2e-134 483.8 370 70.0
Prupe.3G293600 Prunus persica HOM05D003450 ORTHO05D004150 1.5e-134 483.4 371 69.8
CsaV3_5G027040 Cucumis sativus L. HOM05D003450 ORTHO05D004150 3.8e-133 478.8 369 68.8
MELO3C021591.2 Cucumis melo HOM05D003450 ORTHO05D004150 5.0e-133 478.4 369 68.8
Sed0008503 Sechium edule HOM05D003450 ORTHO05D004150 1.4e-132 476.9 369 69.1
CANSAT64G2043 Cannabis sativa HOM05D003450 ORTHO05D004150 4.2e-132 475.3 373 67.6
HanXRQChr17g0533281 Helianthus annuus HOM05D003450 ORTHO05D004150 5.5e-132 474.9 370 67.3
VMungo0464G1019 Vigna mungo HOM05D003450 ORTHO05D004150 5.5e-132 474.9 369 66.9
MSTRG.11963 Avicennia marina HOM05D003450 ORTHO05D004150 1.6e-131 473.4 368 67.1
MD17G1022800 Malus domestica HOM05D003450 ORTHO05D004150 1.6e-131 473.4 370 68.9
Nn2g10559 Nelumbo nucifera HOM05D003450 ORTHO05D004150 1.6e-131 473.4 372 66.4
arahy.Tifrunner.gnm1.ann1.Q7XHAR Arachis hypogaea HOM05D003450 ORTHO05D004150 2.1e-131 473.0 370 66.8
PGR142G3144 Punica granatum HOM05D003450 ORTHO05D004150 2.1e-131 473.0 369 68.6
arahy.Tifrunner.gnm1.ann1.F3BVF1 Arachis hypogaea HOM05D003450 ORTHO05D004150 2.7e-131 472.6 370 66.5
FAN05G3254 Fragaria x ananassa HOM05D003450 ORTHO05D004150 2.7e-131 472.6 369 68.0
MD09G1023300 Malus domestica HOM05D003450 ORTHO05D004150 2.7e-131 472.6 370 68.1
Ca_04147_v3 Cicer arietinum L. HOM05D003450 ORTHO05D004150 4.6e-131 471.9 369 65.9
Ca_30596_v3 Cicer arietinum L. HOM05D003450 ORTHO05D004150 4.6e-131 471.9 369 65.9
Glyma.19G003200 Glycine max HOM05D003450 ORTHO05D004150 7.9e-131 471.1 369 66.7
Phvul.004G005200 Phaseolus vulgaris HOM05D003450 ORTHO05D004150 7.9e-131 471.1 369 66.1
Lj2g0026665 Lotus japonicus HOM05D003450 ORTHO05D004150 1.0e-130 470.7 369 66.9
FAN09G1073 Fragaria x ananassa HOM05D003450 ORTHO05D004150 1.4e-130 470.3 369 67.8
Nitab4.5_0006540g0050 Nicotiana tabacum HOM05D003450 ORTHO05D004150 1.4e-130 470.3 397 66.2
FvH4_6g51710 Fragaria vesca HOM05D003450 ORTHO05D004150 2.3e-130 469.5 369 67.5
FAN02G3092 Fragaria x ananassa HOM05D003450 ORTHO05D004150 5.1e-130 468.4 369 67.5
RcHm_v2.0_Chr2g0173241 Rosa chinensis HOM05D003450 ORTHO05D004150 5.1e-130 468.4 369 66.9
FAN14G2265 Fragaria x ananassa HOM05D003450 ORTHO05D004150 2.0e-129 466.5 369 67.2
Sed0014883 Sechium edule HOM05D003450 ORTHO05D004150 8.2e-128 461.1 369 67.2
Medtr6g004510 Medicago truncatula HOM05D003450 ORTHO05D004150 1.8e-127 459.9 369 65.0
ECA246G5325 Erigeron canadensis HOM05D003450 ORTHO05D004150 4.1e-127 458.8 370 65.1
Lsat_1_v5_gn_3_9121 Lactuca sativa HOM05D003450 ORTHO05D004150 6.9e-127 458.0 371 66.6
EL10Ac5g11313 Beta vulgaris HOM05D003450 ORTHO05D004150 1.2e-126 457.2 371 65.2
TPR.G31948 Trifolium pratense HOM05D003450 ORTHO05D004150 1.5e-126 456.8 369 64.5
Psat1g053760 Pisum sativum HOM05D003450 ORTHO05D004150 1.0e-125 454.1 370 64.9
SalBow8G1100 Salvia bowleyana HOM05D003450 ORTHO05D004150 2.9e-125 452.6 369 63.7
SGA_v2.0_scaffold76G25156 Striga asiatica HOM05D003450 ORTHO05D004150 3.8e-125 452.2 369 63.7
Eucgr.I01732 Eucalyptus grandis HOM05D003450 ORTHO05D004150 5.0e-125 451.8 371 65.0
SalBow8G1997 Salvia bowleyana HOM05D003450 ORTHO05D004150 1.4e-124 450.3 369 63.4
Lalb_Chr18g0055341 Lupinus albus HOM05D003450 ORTHO05D004150 1.0e-122 444.1 372 63.4
Aqoxy6G00591 Aquilegia oxysepala HOM05D003450 ORTHO05D004150 1.8e-122 443.4 372 63.2
ECA233G1844 Erigeron canadensis HOM05D003450 ORTHO05D004150 2.3e-122 443.0 368 62.2
CAN.G532.15 Capsicum annuum HOM05D003450 ORTHO05D004150 3.3e-121 439.1 367 66.5
Glyma.19G056700 Glycine max HOM05D003450 ORTHO05D004150 3.3e-121 439.1 369 61.8
MBI14_g36922_MAGBIO Magnolia biondii HOM05D003450 ORTHO05D004150 3.3e-121 439.1 369 61.8
Sopen08g029730 Solanum pennellii HOM05D003450 ORTHO05D004150 1.3e-120 437.2 369 65.6
Hund15478 Selenicereus undatus HOM05D003450 ORTHO05D004150 1.7e-120 436.8 369 63.4
Ah.02g116930 Amaranthus hybridus HOM05D003450 ORTHO05D004150 2.2e-120 436.4 371 62.0
PGSC0003DMG400012328 Solanum tuberosum HOM05D003450 ORTHO05D004150 4.8e-120 435.3 369 65.9
AUR62009512 Chenopodium quinoa HOM05D003450 ORTHO05D004150 2.6e-118 429.5 372 60.5
AUR62034774 Chenopodium quinoa HOM05D003450 ORTHO05D004150 3.5e-118 429.1 372 60.5
Solyc08g081410.3 Solanum lycopersicum HOM05D003450 ORTHO05D004150 1.3e-117 427.2 369 64.2
Lalb_Chr15g0086731 Lupinus albus HOM05D003450 ORTHO05D004150 5.5e-116 421.8 371 61.7
Aa31LG2G5130 Aethionema arabicum HOM05D003450 ORTHO05D004150 1.6e-115 420.2 371 59.6
CSS0015164 Camellia sinensis var. sinensis HOM05D003450 ORTHO05D004150 1.6e-115 420.2 263 87.1
THA.LOC104825318 Tarenaya hassleriana HOM05D003450 ORTHO05D004150 2.7e-115 419.5 373 61.4
Hund02491 Selenicereus undatus HOM05D003450 ORTHO05D004150 1.8e-114 416.8 369 60.2
BcaC06g33806 Brassica carinata HOM05D003450 ORTHO05D004150 7.4e-113 411.4 372 59.4
BolC7t44182H Brassica oleracea HOM05D003450 ORTHO05D004150 7.4e-113 411.4 372 59.4
Sp2g16700 Schrenkiella parvula HOM05D003450 ORTHO05D004150 7.4e-113 411.4 371 59.3
A06p41100 Brassica napus HOM05D003450 ORTHO05D004150 9.7e-113 411.0 372 59.4
BraA06t27033Z Brassica rapa HOM05D003450 ORTHO05D004150 9.7e-113 411.0 372 59.4
PSO421G0225 Papaver somniferum HOM05D003450 ORTHO05D004150 1.4e-111 407.1 372 58.9
BcaC06g30980 Brassica carinata HOM05D003450 ORTHO05D004150 2.4e-111 406.4 372 58.9
PSO063G0895 Papaver somniferum HOM05D003450 ORTHO05D004150 2.4e-111 406.4 372 58.6
Thhalv10003626m.g Eutrema salsugineum HOM05D003450 ORTHO05D004150 7.0e-111 404.8 359 60.2
C07p36640 Brassica napus HOM05D003450 ORTHO05D004150 1.2e-110 404.1 372 58.3
AT3G27530 Arabidopsis thaliana HOM05D003450 ORTHO05D004150 3.5e-110 402.5 372 58.6
BcaC03g17471 Brassica carinata HOM05D003450 ORTHO05D004150 2.9e-109 399.4 373 56.8
unitig_61.g26360 Utricularia gibba HOM05D003450 ORTHO05D004150 6.5e-109 398.3 369 58.0
BraA02t08553Z Brassica rapa HOM05D003450 ORTHO05D004150 3.2e-108 396.0 367 57.8
THA.LOC104823952 Tarenaya hassleriana HOM05D003450 ORTHO05D004150 1.0e-106 391.0 371 58.2
A02p35530 Brassica napus HOM05D003450 ORTHO05D004150 6.8e-106 388.3 367 57.2
BcaB07g30154 Brassica carinata HOM05D003450 ORTHO05D004150 8.8e-106 387.9 373 56.6
CSS0005577 Camellia sinensis var. sinensis HOM05D003450 ORTHO05D004150 8.8e-106 387.9 369 62.6
C02p54300 Brassica napus HOM05D003450 ORTHO05D004150 7.0e-103 378.3 373 55.2
BolC2t11498H Brassica oleracea HOM05D003450 ORTHO05D004150 1.2e-102 377.5 373 55.2
DCAR_004619 Daucus carota HOM05D003450 ORTHO05D004150 1.2e-102 377.5 371 56.3
Os12g0538900 Oryza sativa ssp. japonica HOM05D003450 ORTHO05D004150 4.5e-102 375.6 370 51.1
Zm00001eb410430 Zea mays HOM05D003450 ORTHO05D004150 2.3e-98 363.2 370 48.6
AL5G16950 Arabidopsis lyrata HOM05D003450 ORTHO05D004150 7.5e-97 358.2 372 53.2
COL.COLO4_29171 Corchorus olitorius HOM05D003450 ORTHO05D004150 7.5e-97 358.2 267 70.8
Zm00001eb137680 Zea mays HOM05D003450 ORTHO05D004150 7.5e-97 358.2 369 48.2
Carub.0005s0596 Capsella rubella HOM05D003450 ORTHO05D004150 2.2e-96 356.7 372 52.7
CARHR148900 Cardamine hirsuta HOM05D003450 ORTHO05D004150 4.9e-96 355.5 372 53.0
HPP92_017150 Vanilla planifolia HOM05D003450 ORTHO05D004150 5.9e-94 348.6 359 51.5
HPP92_017154 Vanilla planifolia HOM05D003450 ORTHO05D004150 1.3e-93 347.4 359 51.3
Gohir.D04G058450 Gossypium hirsutum HOM05D003450 ORTHO05D004150 1.5e-92 344.0 262 71.0
PSO210G3071 Papaver somniferum HOM05D003450 ORTHO05D004150 2.5e-92 343.2 370 50.5
MBI14_g35409_MAGBIO Magnolia biondii HOM05D003450 ORTHO05D004150 7.2e-92 341.7 369 53.4
PSO210G4892 Papaver somniferum HOM05D003450 ORTHO05D004150 1.8e-90 337.0 370 50.0
ATR0068G094 Amborella trichopoda HOM05D003450 ORTHO05D004150 3.0e-90 336.3 370 49.2
CSS0043437 Camellia sinensis var. sinensis HOM05D003450 ORTHO05D004150 7.5e-89 331.6 201 86.6
Migut.E01197 Erythranthe guttata HOM05D003450 ORTHO05D004150 1.9e-84 317.0 239 66.5
TAR623G1303 Trochodendron aralioides HOM05D003450 ORTHO05D004150 3.6e-83 312.8 226 68.1
Sc07g0005180 Simmondsia chinensis HOM05D003450 ORTHO05D004150 2.0e-78 297.0 228 66.2
Lj8A217T73 Lonicera japonica HOM05D003450 ORTHO05D004150 8.6e-69 265.0 223 62.8
Solyc02g075610.4 Solanum lycopersicum HOM05D003450 ORTHO05D004150 7.3e-68 261.9 240 60.8
MBI14_g31103_MAGBIO Magnolia biondii HOM05D003450 ORTHO05D004150 3.7e-64 249.6 355 46.5
CiPaw.03G045400 Carya illinoinensis HOM05D003450 ORTHO05D004150 8.4e-64 248.4 214 62.1
Mapoly0097s0078 Marchantia polymorpha HOM05D003450 ORTHO05D004150 1.5e-60 237.7 380 38.9
AagrBONN_evm.TU.Sc2ySwM_344.991 Anthoceros agrestis HOM05D003450 ORTHO05D004150 1.9e-60 237.3 396 39.9
BcaC03g17544 Brassica carinata HOM05D003450 ORTHO05D004150 9.6e-60 235.0 263 52.1
RcHm_v2.0_Chr2g0173251 Rosa chinensis HOM05D003450 ORTHO05D004150 7.6e-57 225.3 183 61.2
Pp3c3_27420 Physcomitrium patens HOM05D003450 ORTHO05D004150 7.1e-55 218.8 380 37.9
SMO367G1196 Selaginella moellendorffii HOM05D003450 ORTHO05D004150 7.1e-55 218.8 385 38.7
CDE09G0158 Ceratophyllum demersum HOM05D003450 ORTHO05D004150 1.7e-53 214.2 250 52.4
CDE02G4242 Ceratophyllum demersum HOM05D003450 ORTHO05D004150 3.3e-52 209.9 296 43.2
CAN.G293.1 Capsicum annuum HOM05D003450 ORTHO05D004150 7.3e-52 208.8 165 68.5
Atru.chr6.2427 Acer truncatum HOM05D003450 ORTHO05D004150 9.9e-49 198.4 177 65.0
Gohir.D07G231100 Gossypium hirsutum HOM05D003450 ORTHO05D004150 1.2e-46 191.4 140 69.3
TAR623G1393 Trochodendron aralioides HOM05D003450 ORTHO05D004150 4.6e-46 189.5 158 64.6
Hma1.2p1_1172F.1_g263680 Hydrangea macrophylla HOM05D003450 ORTHO05D004150 1.7e-40 171.0 124 65.3
Actinidia28359 Actinidia chinensis HOM05D003450 ORTHO05D004150 2.5e-36 157.1 201 49.3
FAN18G3542 Fragaria x ananassa HOM05D003450 ORTHO05D004150 9.6e-36 155.2 115 72.2
Zm00001eb420770 Zea mays HOM05D003450 ORTHO05D004150 4.8e-35 152.9 145 54.5
Zm00001eb442080 Zea mays HOM05D003450 ORTHO05D004150 4.8e-35 152.9 145 54.5
CSS0010567 Camellia sinensis var. sinensis HOM05D003450 ORTHO05D004150 5.3e-34 149.4 92 87.0
Zm00001eb235100 Zea mays HOM05D003450 ORTHO05D004150 8.4e-32 142.1 137 54.0
Zm00001eb191840 Zea mays HOM05D003450 ORTHO05D004150 1.4e-31 141.4 137 53.3
Zm00001eb068810 Zea mays HOM05D003450 ORTHO05D004150 4.2e-31 139.8 137 53.3
Zm00001eb190000 Zea mays HOM05D003450 ORTHO05D004150 4.2e-31 139.8 137 52.6
Zm00001eb162870 Zea mays HOM05D003450 ORTHO05D004150 7.1e-31 139.0 137 52.6
Zm00001eb170860 Zea mays HOM05D003450 ORTHO05D004150 6.0e-30 136.0 137 51.8
MCO05G130 Micromonas commoda HOM05D003450 ORTHO05D004150 2.1e-27 127.5 318 31.8
Atru.chr6.2426 Acer truncatum HOM05D003450 ORTHO05D004150 3.7e-27 126.7 86 69.8
Atru.chr6.2428 Acer truncatum HOM05D003450 ORTHO05D004150 2.4e-26 124.0 79 79.7
Sc07g0005170 Simmondsia chinensis HOM05D003450 ORTHO05D004150 3.1e-26 123.6 89 73.0
TPR.G33244 Trifolium pratense HOM05D003450 ORTHO05D004150 3.1e-26 123.6 105 65.7
Zm00001eb367390 Zea mays HOM05D003450 ORTHO05D004150 6.5e-24 115.9 123 48.8
Aqoxy2G03587 Aquilegia oxysepala HOM05D003450 ORTHO05D004150 3.7e-19 100.1 91 57.1
Sopen02g029170 Solanum pennellii HOM05D003450 ORTHO05D004150 2.4e-18 97.4 133 47.4
BolC2t11571H Brassica oleracea HOM05D003450 ORTHO05D004150 7.7e-17 92.4 192 36.5
Gohir.D04G058400 Gossypium hirsutum HOM05D003450 ORTHO05D004150 2.9e-16 90.5 63 66.7
Cpa.g.sc108.76 Carica papaya HOM05D003450 ORTHO05D004150 7.9e-14 82.4 58 62.1
CBR_g57070 Chara braunii HOM05D003450 ORTHO05D004150 7.7e-09 65.9 524 21.8
C02p55220 Brassica napus HOM05D003450 ORTHO05D004150 7.9e-06 55.8 69 46.4
BolC2t11570H Brassica oleracea HOM05D003450 ORTHO05D004150 7.9e-06 55.8 69 46.4


User provided reference genes

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