Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0016777 Camellia sinensis var. sinensis HOM05D006760 ORTHO05D008121 1.1e-37 159.5 78 100.0
CSS0019373 Camellia sinensis var. sinensis HOM05D006760 ORTHO05D008121 3.5e-36 154.5 78 96.2
vmacro00052 Vaccinium macrocarpon HOM05D006760 ORTHO05D008121 1.3e-30 136.0 78 83.3
CSS0002453 Camellia sinensis var. sinensis HOM05D006760 ORTHO05D008121 4.8e-30 134.0 77 85.7
CSS0041869 Camellia sinensis var. sinensis HOM05D006760 ORTHO05D008121 4.8e-30 134.0 77 85.7
Lj8C333T3 Lonicera japonica HOM05D006760 ORTHO05D008121 1.1e-29 132.9 78 80.8
Actinidia32779 Actinidia chinensis HOM05D006760 ORTHO05D008121 1.8e-29 132.1 77 83.1
Actinidia01259 Actinidia chinensis HOM05D006760 ORTHO05D008121 3.1e-29 131.3 78 80.8
Rhsim11G0034300 Rhododendron simsii HOM05D006760 ORTHO05D008121 7.0e-29 130.2 78 78.2
Hma1.2p1_1873F.1_g306180 Hydrangea macrophylla HOM05D006760 ORTHO05D008121 1.2e-28 129.4 78 80.8
Ca_25094_v3 Cicer arietinum L. HOM05D006760 ORTHO05D008121 4.5e-28 127.5 78 79.5
Ca_30394_v3 Cicer arietinum L. HOM05D006760 ORTHO05D008121 4.5e-28 127.5 78 79.5
Cc00_g07450 Coffea canephora HOM05D006760 ORTHO05D008121 4.5e-28 127.5 78 82.1
TPR.G17264 Trifolium pratense HOM05D006760 ORTHO05D008121 4.5e-28 127.5 78 79.5
FvH4_5g24100 Fragaria vesca HOM05D006760 ORTHO05D008121 5.9e-28 127.1 78 76.9
FAN18G2939 Fragaria x ananassa HOM05D006760 ORTHO05D008121 5.9e-28 127.1 78 76.9
Cfa012614 Carpinus fangiana HOM05D006760 ORTHO05D008121 1.0e-27 126.3 78 80.8
Dinv37413 Davidia involucrata HOM05D006760 ORTHO05D008121 1.0e-27 126.3 78 80.8
Medtr5g026680 Medicago truncatula HOM05D006760 ORTHO05D008121 1.7e-27 125.6 78 78.2
FAN18G0636 Fragaria x ananassa HOM05D006760 ORTHO05D008121 3.8e-27 124.4 78 75.6
Prupe.5G019400 Prunus persica HOM05D006760 ORTHO05D008121 3.8e-27 124.4 78 78.2
FAN04G2385 Fragaria x ananassa HOM05D006760 ORTHO05D008121 5.0e-27 124.0 78 75.6
PGSC0003DMG400030849 Solanum tuberosum HOM05D006760 ORTHO05D008121 5.0e-27 124.0 78 75.6
RcHm_v2.0_Chr7g0213631 Rosa chinensis HOM05D006760 ORTHO05D008121 1.1e-26 122.9 78 75.6
FAN13G0245 Fragaria x ananassa HOM05D006760 ORTHO05D008121 1.5e-26 122.5 78 74.4
Solyc08g075680.4 Solanum lycopersicum HOM05D006760 ORTHO05D008121 1.5e-26 122.5 78 74.4
CiPaw.12G072300 Carya illinoinensis HOM05D006760 ORTHO05D008121 1.9e-26 122.1 78 78.2
Lj2g0001135 Lotus japonicus HOM05D006760 ORTHO05D008121 3.2e-26 121.3 78 76.9
Nitab4.5_0000030g0230 Nicotiana tabacum HOM05D006760 ORTHO05D008121 3.2e-26 121.3 78 73.1
Nitab4.5_0001023g0160 Nicotiana tabacum HOM05D006760 ORTHO05D008121 3.2e-26 121.3 78 73.1
Phvul.002G127600 Phaseolus vulgaris HOM05D006760 ORTHO05D008121 5.5e-26 120.6 78 74.4
Sopen08g024330 Solanum pennellii HOM05D006760 ORTHO05D008121 5.5e-26 120.6 78 73.1
arahy.Tifrunner.gnm1.ann1.WT3CQ0 Arachis hypogaea HOM05D006760 ORTHO05D008121 7.2e-26 120.2 78 76.9
arahy.Tifrunner.gnm1.ann1.Z5DNFJ Arachis hypogaea HOM05D006760 ORTHO05D008121 7.2e-26 120.2 78 76.9
CiPaw.11G103800 Carya illinoinensis HOM05D006760 ORTHO05D008121 7.2e-26 120.2 78 75.6
Oeu046799.1 Olea europaea HOM05D006760 ORTHO05D008121 7.2e-26 120.2 78 75.6
Manes.15G182500 Manihot esculenta HOM05D006760 ORTHO05D008121 1.2e-25 119.4 78 71.8
PGR031G0562 Punica granatum HOM05D006760 ORTHO05D008121 1.2e-25 119.4 78 75.6
PGR067G0006 Punica granatum HOM05D006760 ORTHO05D008121 1.2e-25 119.4 78 75.6
Ciclev10001352m.g Citrus clementina HOM05D006760 ORTHO05D008121 2.7e-25 118.2 78 75.6
Glyma.09G214700 Glycine max HOM05D006760 ORTHO05D008121 2.7e-25 118.2 78 78.2
TAR629G0494 Trochodendron aralioides HOM05D006760 ORTHO05D008121 2.7e-25 118.2 77 74.0
MD06G1017100 Malus domestica HOM05D006760 ORTHO05D008121 6.1e-25 117.1 78 74.4
Peaxi162Scf00193g00023 Petunia axillaris HOM05D006760 ORTHO05D008121 6.1e-25 117.1 78 71.8
Glyma.04G123100 Glycine max HOM05D006760 ORTHO05D008121 1.0e-24 116.3 80 77.5
Aqoxy3G00108 Aquilegia oxysepala HOM05D006760 ORTHO05D008121 1.4e-24 115.9 77 68.8
Eucgr.D02586 Eucalyptus grandis HOM05D006760 ORTHO05D008121 1.4e-24 115.9 77 71.4
GSVIVG01022805001 Vitis vinifera HOM05D006760 ORTHO05D008121 1.4e-24 115.9 78 76.9
MSTRG.1766 Avicennia marina HOM05D006760 ORTHO05D008121 1.8e-24 115.5 77 72.7
Lalb_Chr16g0380681 Lupinus albus HOM05D006760 ORTHO05D008121 1.8e-24 115.5 78 73.1
MSTRG.13908 Avicennia marina HOM05D006760 ORTHO05D008121 2.3e-24 115.2 78 70.5
CANSAT21G1082 Cannabis sativa HOM05D006760 ORTHO05D008121 2.3e-24 115.2 78 70.5
CAN.G800.11 Capsicum annuum HOM05D006760 ORTHO05D008121 2.3e-24 115.2 78 70.5
Lalb_Chr05g0229401 Lupinus albus HOM05D006760 ORTHO05D008121 4.0e-24 114.4 80 72.5
SGA_v2.0_scaffold111G31361 Striga asiatica HOM05D006760 ORTHO05D008121 6.8e-24 113.6 78 73.1
Migut.E01355 Erythranthe guttata HOM05D006760 ORTHO05D008121 8.8e-24 113.2 76 72.4
Aa31LG9G15690 Aethionema arabicum HOM05D006760 ORTHO05D008121 2.0e-23 112.1 78 71.8
DCAR_006312 Daucus carota HOM05D006760 ORTHO05D008121 2.0e-23 112.1 78 70.5
SalBow8G1564 Salvia bowleyana HOM05D006760 ORTHO05D008121 2.0e-23 112.1 77 72.7
BcaB01g01049 Brassica carinata HOM05D006760 ORTHO05D008121 9.8e-23 109.8 78 69.2
Os03g0853600 Oryza sativa ssp. japonica HOM05D006760 ORTHO05D008121 1.3e-22 109.4 74 67.6
Potri.001G130100 Populus trichocarpa HOM05D006760 ORTHO05D008121 2.8e-22 108.2 78 67.9
BcaC01g01943 Brassica carinata HOM05D006760 ORTHO05D008121 3.7e-22 107.8 78 69.2
A06p21180 Brassica napus HOM05D006760 ORTHO05D008121 3.7e-22 107.8 78 69.2
C03p70350 Brassica napus HOM05D006760 ORTHO05D008121 3.7e-22 107.8 78 69.2
BolC3t19291H Brassica oleracea HOM05D006760 ORTHO05D008121 3.7e-22 107.8 78 69.2
BraA06t25205Z Brassica rapa HOM05D006760 ORTHO05D008121 3.7e-22 107.8 78 69.2
Thecc.03G324900 Theobroma cacao HOM05D006760 ORTHO05D008121 3.7e-22 107.8 78 69.2
AL5G24580 Arabidopsis lyrata HOM05D006760 ORTHO05D008121 4.9e-22 107.5 78 67.9
AT3G45900 Arabidopsis thaliana HOM05D006760 ORTHO05D008121 4.9e-22 107.5 78 67.9
Carub.0005s1175 Capsella rubella HOM05D006760 ORTHO05D008121 4.9e-22 107.5 78 67.9
THA.LOC104798519 Tarenaya hassleriana HOM05D006760 ORTHO05D008121 4.9e-22 107.5 78 71.8
Sp5g15640 Schrenkiella parvula HOM05D006760 ORTHO05D008121 6.3e-22 107.1 78 66.7
Zm00001eb064790 Zea mays HOM05D006760 ORTHO05D008121 6.3e-22 107.1 73 67.1
Thhalv10002556m.g Eutrema salsugineum HOM05D006760 ORTHO05D008121 8.3e-22 106.7 78 66.7
Atru.chr6.2107 Acer truncatum HOM05D006760 ORTHO05D008121 1.1e-21 106.3 78 70.5
ECA246G2456 Erigeron canadensis HOM05D006760 ORTHO05D008121 1.1e-21 106.3 80 68.8
HanXRQChr06g0173431 Helianthus annuus HOM05D006760 ORTHO05D008121 1.1e-21 106.3 79 70.9
Hund11097 Selenicereus undatus HOM05D006760 ORTHO05D008121 1.4e-21 105.9 76 68.4
Lsat_1_v5_gn_3_23361 Lactuca sativa HOM05D006760 ORTHO05D008121 1.8e-21 105.5 79 69.6
CARHR154260 Cardamine hirsuta HOM05D006760 ORTHO05D008121 2.4e-21 105.1 78 66.7
Duzib205G0742 Durio zibethinus HOM05D006760 ORTHO05D008121 2.4e-21 105.1 78 66.7
Sabra01G0100600 Salix brachista HOM05D006760 ORTHO05D008121 3.1e-21 104.8 78 66.7
HPP92_015129 Vanilla planifolia HOM05D006760 ORTHO05D008121 3.1e-21 104.8 73 68.5
Ah.12g056060 Amaranthus hybridus HOM05D006760 ORTHO05D008121 5.4e-21 104.0 76 65.8
AUR62027315 Chenopodium quinoa HOM05D006760 ORTHO05D008121 5.4e-21 104.0 76 67.1
COL.COLO4_37233 Corchorus olitorius HOM05D006760 ORTHO05D008121 5.4e-21 104.0 73 68.5
AUR62007417 Chenopodium quinoa HOM05D006760 ORTHO05D008121 2.0e-20 102.1 76 65.8
Haze_08041 Corylus avellana HOM05D006760 ORTHO05D008121 2.7e-20 101.7 65 76.9
Haze_08051 Corylus avellana HOM05D006760 ORTHO05D008121 2.7e-20 101.7 65 76.9
EL10Ac5g11912 Beta vulgaris HOM05D006760 ORTHO05D008121 3.5e-20 101.3 74 66.2
HanXRQChr17g0537101 Helianthus annuus HOM05D006760 ORTHO05D008121 7.7e-20 100.1 79 67.1
PSO063G6156 Papaver somniferum HOM05D006760 ORTHO05D008121 7.7e-20 100.1 73 57.5
PSO782G3372 Papaver somniferum HOM05D006760 ORTHO05D008121 7.7e-20 100.1 73 57.5
Gohir.A12G200000 Gossypium hirsutum HOM05D006760 ORTHO05D008121 1.0e-19 99.8 79 64.6
CDE11G0454 Ceratophyllum demersum HOM05D006760 ORTHO05D008121 1.7e-19 99.0 77 63.6
Gohir.D12G202700 Gossypium hirsutum HOM05D006760 ORTHO05D008121 1.7e-19 99.0 79 64.6
VMungo1215G0713 Vigna mungo HOM05D006760 ORTHO05D008121 1.7e-19 99.0 64 73.4
Gorai.008G217700 Gossypium raimondii HOM05D006760 ORTHO05D008121 2.3e-19 98.6 79 64.6
TWI12G1140 Tripterygium wilfordii HOM05D006760 ORTHO05D008121 5.0e-19 97.4 78 64.1
CDE02G3667 Ceratophyllum demersum HOM05D006760 ORTHO05D008121 1.1e-18 96.3 76 61.8
Sc22g0002140 Simmondsia chinensis HOM05D006760 ORTHO05D008121 1.9e-18 95.5 77 63.6
Psat2g143640 Pisum sativum HOM05D006760 ORTHO05D008121 4.2e-18 94.4 60 75.0
unitig_52.g17262 Utricularia gibba HOM05D006760 ORTHO05D008121 8.0e-17 90.1 79 62.0
C01p33630 Brassica napus HOM05D006760 ORTHO05D008121 2.0e-15 85.5 72 61.1
MSTRG.11878 Avicennia marina HOM05D006760 ORTHO05D008121 2.2e-14 82.0 61 65.6
ATR0829G077 Amborella trichopoda HOM05D006760 ORTHO05D008121 6.6e-11 70.5 73 52.1
unitig_699.g19677 Utricularia gibba HOM05D006760 ORTHO05D008121 1.1e-10 69.7 76 52.6
Actinidia06143 Actinidia chinensis HOM05D005525 ORTHO05D006341 1.0e-08 63.2 64 45.3
arahy.Tifrunner.gnm1.ann1.SHH15X Arachis hypogaea HOM05D005525 ORTHO05D006341 1.7e-06 55.8 63 44.4
vmacro10127 Vaccinium macrocarpon HOM05D005525 ORTHO05D006341 1.7e-06 55.8 64 43.8
CSS0028512 Camellia sinensis var. sinensis HOM05D005525 ORTHO05D006341 2.2e-06 55.5 64 40.6
Rhsim09G0206200 Rhododendron simsii HOM05D005525 ORTHO05D006341 2.9e-06 55.1 64 45.3
Hma1.2p1_0404F.1_g145280 Hydrangea macrophylla HOM05D005525 ORTHO05D006341 3.7e-06 54.7 54 44.4
Hma1.2p1_1587F.1_g292280 Hydrangea macrophylla HOM05D005525 ORTHO05D006341 3.7e-06 54.7 54 44.4
arahy.Tifrunner.gnm1.ann1.9S9EKZ Arachis hypogaea HOM05D005525 ORTHO05D006341 4.9e-06 54.3 63 44.4
Gohir.A03G052000 Gossypium hirsutum HOM05D005525 ORTHO05D006341 4.9e-06 54.3 66 42.4
SEGI_12943 Sequoiadendron giganteum HOM05D005525 ORTHO05D008121 6.4e-06 53.9 41 68.3
TAR636G1140 Trochodendron aralioides HOM05D005525 ORTHO05D006341 6.4e-06 53.9 60 40.0
VMungo1309G0981 Vigna mungo HOM05D005525 ORTHO05D005321 6.4e-06 53.9 53 49.1
Glyma.06G129650 Glycine max HOM05D005525 ORTHO05D006341 8.3e-06 53.5 63 44.4
MD07G1287000 Malus domestica HOM05D005525 ORTHO05D006341 8.3e-06 53.5 63 44.4


User provided reference genes

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