Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0016762 Camellia sinensis var. sinensis HOM05D006288 ORTHO05D007416 3.8e-58 228.0 121 100.0
CSS0047986 Camellia sinensis var. sinensis HOM05D006288 ORTHO05D007416 3.8e-58 228.0 121 100.0
vmacro18118 Vaccinium macrocarpon HOM05D006288 ORTHO05D007416 2.8e-45 185.3 116 85.3
Rhsim10G0068900 Rhododendron simsii HOM05D006288 ORTHO05D007416 9.1e-44 180.3 116 82.8
GSVIVG01036516001 Vitis vinifera HOM05D006288 ORTHO05D007416 1.2e-43 179.9 120 80.8
CSS0015874 Camellia sinensis var. sinensis HOM05D006288 ORTHO05D007416 5.9e-43 177.6 120 80.0
CSS0028097 Camellia sinensis var. sinensis HOM05D006288 ORTHO05D007416 5.9e-43 177.6 120 80.0
Dinv34894 Davidia involucrata HOM05D006288 ORTHO05D007416 1.0e-42 176.8 120 80.0
Gohir.D12G056100 Gossypium hirsutum HOM05D006288 ORTHO05D007416 1.3e-42 176.4 121 77.7
Gorai.008G059200 Gossypium raimondii HOM05D006288 ORTHO05D007416 1.3e-42 176.4 121 77.7
Rhsim08G0078400 Rhododendron simsii HOM05D006288 ORTHO05D007416 1.3e-42 176.4 116 80.2
Duzib133G0644 Durio zibethinus HOM05D006288 ORTHO05D007416 1.7e-42 176.0 121 77.7
Duzib133G1254 Durio zibethinus HOM05D006288 ORTHO05D007416 1.7e-42 176.0 121 77.7
Gohir.A12G056700 Gossypium hirsutum HOM05D006288 ORTHO05D007416 6.5e-42 174.1 121 76.9
Cc07_g04640 Coffea canephora HOM05D006288 ORTHO05D007416 8.5e-42 173.7 121 76.9
TAR629G2245 Trochodendron aralioides HOM05D006288 ORTHO05D007416 8.5e-42 173.7 121 77.7
Thecc.10G108100 Theobroma cacao HOM05D005170 ORTHO05D007416 1.1e-41 173.3 121 78.5
PGR004G0851 Punica granatum HOM05D006288 ORTHO05D007416 7.2e-41 170.6 121 76.9
Oeu007090.1 Olea europaea HOM05D006288 ORTHO05D007416 1.6e-40 169.5 119 75.6
CSS0029131 Camellia sinensis var. sinensis HOM05D006288 ORTHO05D007416 4.7e-40 167.9 120 76.7
Cfa007713 Carpinus fangiana HOM05D006288 ORTHO05D007416 8.0e-40 167.2 111 78.4
Manes.01G106000 Manihot esculenta HOM05D006288 ORTHO05D007416 8.0e-40 167.2 122 74.6
Cpa.g.sc14.255 Carica papaya HOM05D006288 ORTHO05D007416 1.8e-39 166.0 122 72.1
Solyc02g065690.3 Solanum lycopersicum HOM05D006288 ORTHO05D007416 1.8e-39 166.0 114 77.2
Sopen02g015910 Solanum pennellii HOM05D006288 ORTHO05D007416 1.8e-39 166.0 114 77.2
VMungo0464G1523 Vigna mungo HOM05D006288 ORTHO05D007416 1.8e-39 166.0 111 77.5
Hma1.2p1_0304F.1_g119265 Hydrangea macrophylla HOM05D006288 ORTHO05D007416 4.0e-39 164.9 116 75.0
Hma1.2p1_0304F.1_g119270 Hydrangea macrophylla HOM05D006288 ORTHO05D007416 4.0e-39 164.9 116 75.0
Glyma.13G051400 Glycine max HOM05D006288 ORTHO05D007416 5.2e-39 164.5 112 75.0
Glyma.19G037000 Glycine max HOM05D006288 ORTHO05D007416 5.2e-39 164.5 112 75.9
PGSC0003DMG400026550 Solanum tuberosum HOM05D006288 ORTHO05D007416 5.2e-39 164.5 114 76.3
Manes.02G062500 Manihot esculenta HOM05D006288 ORTHO05D007416 8.8e-39 163.7 112 77.7
Medtr3g034300 Medicago truncatula HOM05D006288 ORTHO05D007416 8.8e-39 163.7 116 73.3
arahy.Tifrunner.gnm1.ann1.J0I6JM Arachis hypogaea HOM05D006288 ORTHO05D007416 1.5e-38 162.9 119 72.3
Peaxi162Scf00019g00316 Petunia axillaris HOM05D006288 ORTHO05D007416 1.5e-38 162.9 112 77.7
Lj3g0015520 Lotus japonicus HOM05D006288 ORTHO05D007416 2.0e-38 162.5 112 75.0
Psat5g210920 Pisum sativum HOM05D006288 ORTHO05D007416 2.0e-38 162.5 115 73.9
Prupe.3G247000 Prunus persica HOM05D006288 ORTHO05D007416 2.0e-38 162.5 120 72.5
Sc11g0008960 Simmondsia chinensis HOM05D006288 ORTHO05D007416 2.0e-38 162.5 116 74.1
TWI60G1717 Tripterygium wilfordii HOM05D006288 ORTHO05D007416 2.0e-38 162.5 110 77.3
Ca_13697_v3 Cicer arietinum L. HOM05D006288 ORTHO05D007416 2.6e-38 162.2 111 75.7
Migut.K00879 Erythranthe guttata HOM05D006288 ORTHO05D007416 2.6e-38 162.2 119 71.4
Psat5g210840 Pisum sativum HOM05D006288 ORTHO05D007416 2.6e-38 162.2 118 72.0
Hund16253 Selenicereus undatus HOM05D006288 ORTHO05D007416 2.6e-38 162.2 122 71.3
TPR.G14566 Trifolium pratense HOM05D006288 ORTHO05D007416 4.4e-38 161.4 116 71.6
Lalb_Chr21g0318141 Lupinus albus HOM05D006288 ORTHO05D007416 7.5e-38 160.6 119 69.7
Atru.chr8.595 Acer truncatum HOM05D006288 ORTHO05D007416 2.2e-37 159.1 119 70.6
MD09G1077100 Malus domestica HOM05D006288 ORTHO05D007416 2.8e-37 158.7 116 69.8
Ah.16g100880 Amaranthus hybridus HOM05D006288 ORTHO05D007416 3.7e-37 158.3 116 70.7
PSO832G2920 Papaver somniferum HOM05D006288 ORTHO05D007416 3.7e-37 158.3 113 74.3
Phvul.004G044700 Phaseolus vulgaris HOM05D006288 ORTHO05D007416 4.9e-37 157.9 111 73.9
RcHm_v2.0_Chr2g0164421 Rosa chinensis HOM05D006288 ORTHO05D007416 6.3e-37 157.5 110 72.7
ATR0691G027 Amborella trichopoda HOM05D006288 ORTHO05D007416 8.3e-37 157.1 118 70.3
Nitab4.5_0003203g0060 Nicotiana tabacum HOM05D006288 ORTHO05D007416 8.3e-37 157.1 111 75.7
SGA_v2.0_scaffold30G12393 Striga asiatica HOM05D006288 ORTHO05D007416 1.1e-36 156.8 119 68.1
PSO210G6985 Papaver somniferum HOM05D006288 ORTHO05D007416 1.4e-36 156.4 113 72.6
QL09p029462 Quercus lobata HOM05D006288 ORTHO05D007416 1.4e-36 156.4 119 69.7
CiPaw.03G081300 Carya illinoinensis HOM05D006288 ORTHO05D007416 1.8e-36 156.0 111 73.9
SalBow7G0779 Salvia bowleyana HOM05D006288 ORTHO05D007416 1.8e-36 156.0 119 70.6
Psat5g212400 Pisum sativum HOM05D006288 ORTHO05D007416 3.1e-36 155.2 114 70.2
PSO675G0562 Papaver somniferum HOM05D006288 ORTHO05D007416 4.1e-36 154.8 113 71.7
PSO541G1058 Papaver somniferum HOM05D006288 ORTHO05D007416 1.2e-35 153.3 113 70.8
MD17G1067500 Malus domestica HOM05D006288 ORTHO05D007416 1.6e-35 152.9 114 66.7
Lsat_1_v5_gn_4_174040 Lactuca sativa HOM05D006288 ORTHO05D007416 7.8e-35 150.6 112 72.3
Eucgr.F02878 Eucalyptus grandis HOM05D006288 ORTHO05D007416 5.0e-34 147.9 112 71.4
Os02g0190900 Oryza sativa ssp. japonica HOM05D006288 ORTHO05D007416 2.5e-33 145.6 119 64.7
AUR62023135 Chenopodium quinoa HOM05D006288 ORTHO05D007416 3.3e-33 145.2 119 64.7
CsaV3_4G009920 Cucumis sativus L. HOM05D006288 ORTHO05D007416 4.3e-33 144.8 121 66.1
unitig_32.g10759 Utricularia gibba HOM05D006288 ORTHO05D007416 7.3e-33 144.1 119 63.9
EL10Ac2g04409 Beta vulgaris HOM05D006288 ORTHO05D007416 9.5e-33 143.7 116 66.4
FAN10G3625 Fragaria x ananassa HOM05D006288 ORTHO05D007416 4.7e-32 141.4 102 71.6
THA.LOC104805112 Tarenaya hassleriana HOM05D006288 ORTHO05D007416 4.7e-32 141.4 110 66.4
CANSAT64G2264 Cannabis sativa HOM05D005170 ORTHO05D007416 1.0e-31 140.2 107 66.4
Actinidia17612 Actinidia chinensis HOM05D006288 ORTHO05D007416 2.3e-31 139.0 104 74.0
Actinidia26277 Actinidia chinensis HOM05D006288 ORTHO05D007416 2.3e-31 139.0 120 65.0
SEGI_23755 Sequoiadendron giganteum HOM05D006288 ORTHO05D007416 1.5e-30 136.3 113 61.9
Nn4g23570 Nelumbo nucifera HOM05D006288 ORTHO05D007416 2.0e-30 136.0 119 63.0
FAN10G2886 Fragaria x ananassa HOM05D006288 ORTHO05D007416 2.6e-30 135.6 99 69.7
Zm00001eb234970 Zea mays HOM05D006288 ORTHO05D007416 2.6e-30 135.6 109 62.4
C07p39960 Brassica napus HOM05D006288 ORTHO05D007416 3.4e-30 135.2 103 65.0
BolC7t44529H Brassica oleracea HOM05D006288 ORTHO05D007416 3.4e-30 135.2 103 64.1
CAN.G93.47 Capsicum annuum HOM05D006288 ORTHO05D007416 7.5e-30 134.0 115 62.6
Sabra17G0089200 Salix brachista HOM05D006288 ORTHO05D007416 7.5e-30 134.0 96 71.9
BraA06t26742Z Brassica rapa HOM05D006288 ORTHO05D007416 9.8e-30 133.7 107 61.7
Atru.BG.156.p Acer truncatum HOM05D006288 ORTHO05D007416 2.2e-29 132.5 94 71.3
FAN14G1171 Fragaria x ananassa HOM05D006288 ORTHO05D007416 2.9e-29 132.1 114 64.0
HPP92_018391 Vanilla planifolia HOM05D006288 ORTHO05D007416 6.4e-29 131.0 116 60.3
Nitab4.5_0002249g0090 Nicotiana tabacum HOM05D006288 ORTHO05D007416 5.9e-27 124.4 76 84.2
TAR371G0310 Trochodendron aralioides HOM05D006288 ORTHO05D007416 5.9e-27 124.4 92 70.7
DCAR_011002 Daucus carota HOM05D006288 ORTHO05D007416 1.0e-26 123.6 78 84.6
Carub.0008s0943 Capsella rubella HOM05D006288 ORTHO05D007416 1.3e-26 123.2 110 59.1
COL.COLO4_00228 Corchorus olitorius HOM05D006288 ORTHO05D007416 3.0e-26 122.1 77 84.4
Potri.017G106200 Populus trichocarpa HOM05D006288 ORTHO05D007416 3.0e-26 122.1 117 56.4
Lsat_1_v5_gn_4_173980 Lactuca sativa HOM05D006288 ORTHO05D007416 6.6e-26 120.9 112 59.8
Hma1.2p1_2186F.1_g316383 Hydrangea macrophylla HOM05D006288 ORTHO05D007416 2.1e-24 115.9 76 77.6
Hma1.2p1_3488F.1_g336360 Hydrangea macrophylla HOM05D006288 ORTHO05D007416 2.1e-24 115.9 76 77.6
CDE10G0042 Ceratophyllum demersum HOM05D006288 ORTHO05D007416 8.0e-24 114.0 103 58.3
ECA232G4388 Erigeron canadensis HOM05D006288 ORTHO05D007416 8.9e-23 110.5 115 54.8
Aa31LG7G12050 Aethionema arabicum HOM05D006288 ORTHO05D007416 5.8e-22 107.8 116 51.7
MELO3C018910.2 Cucumis melo HOM05D006288 ORTHO05D007416 5.8e-22 107.8 121 52.9
Sed0021882 Sechium edule HOM05D006288 ORTHO05D007416 5.8e-22 107.8 86 67.4
ClCG07G016140 Citrullus lanatus HOM05D006288 ORTHO05D007416 7.5e-22 107.5 116 53.4
FAN05G5526 Fragaria x ananassa HOM05D006288 ORTHO05D007416 1.7e-21 106.3 75 73.3
FAN02G0987 Fragaria x ananassa HOM05D006288 ORTHO05D007416 4.9e-21 104.8 114 54.4
FAN09G1057 Fragaria x ananassa HOM05D010582 ORTHO05D007416 4.9e-21 104.8 114 54.4
Eucgr.K01979 Eucalyptus grandis HOM05D006288 ORTHO05D007416 8.3e-21 104.0 90 66.7
HanXRQChr15g0464891 Helianthus annuus HOM05D006288 ORTHO05D007416 1.1e-20 103.6 93 62.4
FvH4_6g46100 Fragaria vesca HOM05D006288 ORTHO05D007416 5.4e-20 101.3 69 75.4
Thhalv10005135m.g Eutrema salsugineum HOM05D006288 ORTHO05D007416 1.2e-19 100.1 74 66.2
CARHR287980 Cardamine hirsuta HOM05D006288 ORTHO05D007416 2.7e-19 99.0 108 50.9
A09p04890 Brassica napus HOM05D006288 ORTHO05D007416 3.5e-19 98.6 73 67.1
BraA09t36127Z Brassica rapa HOM05D006288 ORTHO05D007416 3.5e-19 98.6 73 67.1
Sp2g19860 Schrenkiella parvula HOM05D006288 ORTHO05D007416 7.8e-19 97.4 71 66.2
AT5G49550 Arabidopsis thaliana HOM05D006288 ORTHO05D007416 1.3e-18 96.7 72 65.3
BcaC04g23731 Brassica carinata HOM05D006288 ORTHO05D007416 1.7e-18 96.3 71 66.2
C09p05280 Brassica napus HOM05D006288 ORTHO05D007416 1.7e-18 96.3 71 66.2
BcaB04g19620 Brassica carinata HOM05D006288 ORTHO05D007416 3.0e-18 95.5 73 64.4
FvH4_6g24710 Fragaria vesca HOM05D006288 ORTHO05D007416 3.0e-18 95.5 59 81.4
FAN14G4004 Fragaria x ananassa HOM05D006288 ORTHO05D007416 3.0e-18 95.5 59 81.4
AL954U10010 Arabidopsis lyrata HOM05D006288 ORTHO05D007416 6.6e-18 94.4 72 63.9
AL8G23340 Arabidopsis lyrata HOM05D006288 ORTHO05D007416 1.5e-17 93.2 112 45.5
Mapoly0015s0174 Marchantia polymorpha HOM05D006288 ORTHO05D007416 1.9e-17 92.8 103 42.7
AagrBONN_evm.TU.Sc2ySwM_344.2644 Anthoceros agrestis HOM05D006288 ORTHO05D007416 1.1e-15 87.0 106 42.5
Pp3c21_3840 Physcomitrium patens HOM05D006288 ORTHO05D007416 1.8e-15 86.3 103 44.7
SHI46878 Sapria himalayana HOM05D006288 ORTHO05D007416 1.3e-13 80.1 72 50.0
SMO358G0122 Selaginella moellendorffii HOM05D006288 ORTHO05D007416 4.1e-12 75.1 94 40.4
Haze_03283 Corylus avellana HOM05D002280 ORTHO05D002322 3.5e-11 72.0 43 81.4
Psat6g174640 Pisum sativum HOM05D006288 ORTHO05D007416 6.0e-11 71.2 46 76.1
FAN03G1360 Fragaria x ananassa HOM05D006288 ORTHO05D007416 5.2e-07 58.2 53 56.6


User provided reference genes

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