Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0016727 Camellia sinensis var. sinensis HOM05D002861 ORTHO05D003104 1.5e-52 209.1 101 100.0
CSS0020648 Camellia sinensis var. sinensis HOM05D002861 ORTHO05D003104 1.5e-52 209.1 101 100.0
Peaxi162Scf01011g00211 Petunia axillaris HOM05D002861 ORTHO05D003104 5.9e-12 74.3 56 62.5
MD04G1235900 Malus domestica HOM05D002861 ORTHO05D003104 1.3e-11 73.2 51 66.7
PSO063G6646 Papaver somniferum HOM05D002861 ORTHO05D003104 1.3e-11 73.2 51 62.7
Hma1.2p1_0123F.1_g057920 Hydrangea macrophylla HOM05D002861 ORTHO05D003104 1.7e-11 72.8 84 47.6
Hma1.2p1_0123F.1_g057930 Hydrangea macrophylla HOM05D002861 ORTHO05D003104 2.2e-11 72.4 84 50.0
Actinidia38916 Actinidia chinensis HOM05D002861 ORTHO05D003104 3.8e-11 71.6 84 51.2
Manes.09G144800 Manihot esculenta HOM05D002861 ORTHO05D003104 5.0e-11 71.2 88 44.3
GSVIVG01026376001 Vitis vinifera HOM05D002861 ORTHO05D003104 5.0e-11 71.2 77 53.2
Ciclev10023351m.g Citrus clementina HOM05D002861 ORTHO05D003104 8.5e-11 70.5 57 52.6
PGSC0003DMG401010686 Solanum tuberosum HOM05D002861 ORTHO05D003104 1.9e-10 69.3 56 58.9
Cc09_g03190 Coffea canephora HOM05D002861 ORTHO05D003104 7.2e-10 67.4 84 45.2
FAN05G3792 Fragaria x ananassa HOM05D002861 ORTHO05D003104 7.2e-10 67.4 55 61.8
QL03p068890 Quercus lobata HOM05D002861 ORTHO05D003104 9.4e-10 67.0 73 50.7
Ciclev10020477m.g Citrus clementina HOM05D002861 ORTHO05D003104 1.6e-09 66.2 84 45.2
FAN05G1070 Fragaria x ananassa HOM05D002861 ORTHO05D003104 2.7e-09 65.5 55 60.0
FAN14G1630 Fragaria x ananassa HOM05D002861 ORTHO05D003104 2.7e-09 65.5 55 58.2
FAN02G4407 Fragaria x ananassa HOM05D002861 ORTHO05D003104 3.6e-09 65.1 51 60.8
AUR62005296 Chenopodium quinoa HOM05D002861 ORTHO05D003104 4.7e-09 64.7 56 51.8
Oeu007688.1 Olea europaea HOM05D002861 ORTHO05D003104 4.7e-09 64.7 90 43.3
Sabra19G0036800 Salix brachista HOM05D002861 ORTHO05D003104 4.7e-09 64.7 83 44.6
TAR633G0661 Trochodendron aralioides HOM05D002861 ORTHO05D003104 6.1e-09 64.3 87 42.5
MD12G1254800 Malus domestica HOM05D002861 ORTHO05D003104 8.0e-09 63.9 79 48.1
TAR633G1221 Trochodendron aralioides HOM05D002861 ORTHO05D003104 1.0e-08 63.5 84 44.0
Ciclev10020909m.g Citrus clementina HOM05D002861 ORTHO05D003104 1.4e-08 63.2 85 41.2
MD12G1254900 Malus domestica HOM05D002861 ORTHO05D003104 1.8e-08 62.8 78 46.2
ClCG11G010150 Citrullus lanatus HOM05D002861 ORTHO05D003104 2.3e-08 62.4 57 49.1
Eucgr.B02176 Eucalyptus grandis HOM05D002861 ORTHO05D003104 2.3e-08 62.4 84 38.1
MD12G1254700 Malus domestica HOM05D002861 ORTHO05D003104 2.3e-08 62.4 79 46.8
Potri.019G030300 Populus trichocarpa HOM05D002861 ORTHO05D003104 2.3e-08 62.4 83 43.4
PGR031G1681 Punica granatum HOM05D002861 ORTHO05D003104 2.3e-08 62.4 45 66.7
QL04p087457 Quercus lobata HOM05D002861 ORTHO05D003104 2.3e-08 62.4 84 45.2
QL04p087697 Quercus lobata HOM05D002861 ORTHO05D003104 2.3e-08 62.4 85 44.7
A09p47310 Brassica napus HOM05D002861 ORTHO05D003104 3.0e-08 62.0 74 44.6
C08p29540 Brassica napus HOM05D002861 ORTHO05D003104 3.0e-08 62.0 74 44.6
BraA09t40192Z Brassica rapa HOM05D002861 ORTHO05D003104 3.0e-08 62.0 74 44.6
Aa31LG5G24020 Aethionema arabicum HOM05D002861 ORTHO05D003104 4.0e-08 61.6 41 65.9
Aa31LG5G24050 Aethionema arabicum HOM05D002861 ORTHO05D003104 4.0e-08 61.6 41 65.9
Nn1g07961 Nelumbo nucifera HOM05D002861 ORTHO05D003104 4.0e-08 61.6 84 44.0
Potri.019G029900 Populus trichocarpa HOM05D002861 ORTHO05D003104 4.0e-08 61.6 83 43.4
TWI60G1199 Tripterygium wilfordii HOM05D002861 ORTHO05D003104 4.0e-08 61.6 83 38.6
PGR031G2797 Punica granatum HOM05D002861 ORTHO05D003104 5.2e-08 61.2 88 40.9
Migut.F01820 Erythranthe guttata HOM05D002861 ORTHO05D003104 6.7e-08 60.8 84 45.2
Aa31LG5G23950 Aethionema arabicum HOM05D002861 ORTHO05D003104 8.8e-08 60.5 51 52.9
Aa31LG5G23970 Aethionema arabicum HOM05D002861 ORTHO05D003104 8.8e-08 60.5 51 52.9
ClCG11G010120 Citrullus lanatus HOM05D002861 ORTHO05D003104 8.8e-08 60.5 85 38.8
Aa31LG5G23930 Aethionema arabicum HOM05D002861 ORTHO05D003104 1.1e-07 60.1 41 65.9
Peaxi162Scf01399g00018 Petunia axillaris HOM05D002861 ORTHO05D003104 1.1e-07 60.1 87 37.9
Ciclev10020658m.g Citrus clementina HOM05D002861 ORTHO05D003104 2.6e-07 58.9 65 47.7
Sabra19G0036500 Salix brachista HOM05D002861 ORTHO05D003104 2.6e-07 58.9 79 41.8
Sabra19G0036400 Salix brachista HOM05D002861 ORTHO05D003104 3.3e-07 58.5 95 35.8
Sabra19G0039500 Salix brachista HOM05D002861 ORTHO05D003104 3.3e-07 58.5 95 35.8
Thhalv10010949m.g Eutrema salsugineum HOM05D002861 ORTHO05D003104 4.4e-07 58.2 66 48.5
Prupe.6G355800 Prunus persica HOM05D002861 ORTHO05D003104 4.4e-07 58.2 78 44.9
PGR142G3755 Punica granatum HOM05D002861 ORTHO05D003104 5.7e-07 57.8 83 39.8
Sabra19G0036700 Salix brachista HOM05D002861 ORTHO05D003104 5.7e-07 57.8 83 38.6
TWI34G0682 Tripterygium wilfordii HOM05D002861 ORTHO05D003104 5.7e-07 57.8 83 37.3
TWI34G1014 Tripterygium wilfordii HOM05D002861 ORTHO05D003104 5.7e-07 57.8 83 37.3
Sabra19G0036600 Salix brachista HOM05D002861 ORTHO05D003104 9.7e-07 57.0 98 34.7
PSO063G4438 Papaver somniferum HOM05D002861 ORTHO05D003104 1.3e-06 56.6 83 39.8
AT3G54310 Arabidopsis thaliana HOM05D002861 ORTHO05D003104 1.7e-06 56.2 65 49.2
Duzib177G0372 Durio zibethinus HOM05D002861 ORTHO05D003104 1.7e-06 56.2 89 42.7
Eucgr.B02174 Eucalyptus grandis HOM05D002861 ORTHO05D003104 1.7e-06 56.2 83 37.3
PSO339G3782 Papaver somniferum HOM05D002861 ORTHO05D003104 1.7e-06 56.2 82 42.7
PSO339G4235 Papaver somniferum HOM05D002861 ORTHO05D003104 1.7e-06 56.2 82 42.7
Potri.019G029800 Populus trichocarpa HOM05D002861 ORTHO05D003104 1.7e-06 56.2 83 38.6
Atru.chr2.1237 Acer truncatum HOM05D002861 ORTHO05D003104 2.2e-06 55.8 84 35.7
Carub.0005s2091 Capsella rubella HOM05D002861 ORTHO05D003104 2.2e-06 55.8 69 46.4
Ciclev10024529m.g Citrus clementina HOM05D002861 ORTHO05D003104 2.2e-06 55.8 76 42.1
CsaV3_2G010200 Cucumis sativus L. HOM05D002861 ORTHO05D003104 2.2e-06 55.8 84 36.9
MD12G1254400 Malus domestica HOM05D002861 ORTHO05D003104 2.2e-06 55.8 79 39.2
TWI34G1363 Tripterygium wilfordii HOM05D002861 ORTHO05D003104 2.2e-06 55.8 83 36.1
Carub.0005s2090 Capsella rubella HOM05D002861 ORTHO05D003104 2.8e-06 55.5 79 41.8
COL.COLO4_20548 Corchorus olitorius HOM05D002861 ORTHO05D003104 2.8e-06 55.5 77 44.2
MD12G1254500 Malus domestica HOM05D002861 ORTHO05D003104 2.8e-06 55.5 79 40.5
Thecc.05G260700 Theobroma cacao HOM05D002861 ORTHO05D003104 2.8e-06 55.5 77 44.2
Sabra19G0037000 Salix brachista HOM05D002861 ORTHO05D003104 3.7e-06 55.1 83 38.6
Ciclev10020557m.g Citrus clementina HOM05D002861 ORTHO05D003104 4.8e-06 54.7 81 39.5
Eucgr.B02175 Eucalyptus grandis HOM05D002861 ORTHO05D003104 4.8e-06 54.7 40 65.0
QL04p087826 Quercus lobata HOM05D002861 ORTHO05D003104 4.8e-06 54.7 105 35.2
AL4G35700 Arabidopsis lyrata HOM05D002861 ORTHO05D003104 6.3e-06 54.3 87 35.6
MD12G1254000 Malus domestica HOM05D002861 ORTHO05D003104 8.2e-06 53.9 79 39.2
Sed0017655 Sechium edule HOM05D002861 ORTHO05D003104 8.2e-06 53.9 85 35.3


User provided reference genes

Program Settings