Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0016723 Camellia sinensis var. sinensis HOM05D000181 ORTHO05D007406 4.6e-275 950.7 498 100.0
CSS0016692 Camellia sinensis var. sinensis HOM05D000181 ORTHO05D007406 7.6e-246 853.6 496 92.3
TAR629G1994 Trochodendron aralioides HOM05D000181 ORTHO05D007406 4.2e-159 565.5 489 64.4
Actinidia27312 Actinidia chinensis HOM05D000181 ORTHO05D007406 4.3e-156 555.4 501 62.5
Hma1.2p1_0440F.1_g153440 Hydrangea macrophylla HOM05D000181 ORTHO05D007406 1.1e-151 540.8 501 63.7
QL02p030075 Quercus lobata HOM05D000181 ORTHO05D007406 3.3e-148 529.3 459 63.8
Sc22g0004900 Simmondsia chinensis HOM05D000181 ORTHO05D007406 4.8e-147 525.4 481 61.5
Nitab4.5_0000798g0070 Nicotiana tabacum HOM05D000181 ORTHO05D007406 1.4e-146 523.9 485 62.5
Sopen08g030790 Solanum pennellii HOM05D000181 ORTHO05D007406 1.4e-146 523.9 488 62.7
Solyc08g082530.4 Solanum lycopersicum HOM05D000181 ORTHO05D007406 4.0e-146 522.3 488 62.7
Oeu038548.1 Olea europaea HOM05D000181 ORTHO05D007406 1.5e-145 520.4 467 61.9
Nitab4.5_0005962g0040 Nicotiana tabacum HOM05D000181 ORTHO05D007406 2.0e-145 520.0 485 62.5
Cfa011985 Carpinus fangiana HOM05D000181 ORTHO05D007406 2.6e-145 519.6 495 61.4
PGSC0003DMG400012269 Solanum tuberosum HOM05D000181 ORTHO05D007406 9.9e-145 517.7 487 62.6
Gorai.004G132200 Gossypium raimondii HOM05D000181 ORTHO05D007406 2.9e-144 516.2 492 60.0
Prupe.5G122500 Prunus persica HOM05D000181 ORTHO05D007406 3.8e-144 515.8 488 60.5
Thecc.03G300400 Theobroma cacao HOM05D000181 ORTHO05D007406 3.8e-144 515.8 493 59.2
Gohir.A08G112300 Gossypium hirsutum HOM05D000181 ORTHO05D007406 4.9e-144 515.4 474 61.4
SalBow1G5541 Salvia bowleyana HOM05D000181 ORTHO05D007406 9.3e-143 511.1 466 60.3
MSTRG.25690 Avicennia marina HOM05D000181 ORTHO05D007406 6.0e-142 508.4 433 64.0
Cc08_g16240 Coffea canephora HOM05D000181 ORTHO05D007406 7.9e-142 508.1 484 58.5
Dinv38822 Davidia involucrata HOM05D006022 ORTHO05D007406 3.9e-141 505.8 386 72.8
Migut.A00625 Erythranthe guttata HOM05D000181 ORTHO05D007406 3.9e-141 505.8 434 64.5
Eucgr.D01758 Eucalyptus grandis HOM05D000181 ORTHO05D007406 1.1e-140 504.2 427 63.9
Haze_09087 Corylus avellana HOM05D000181 ORTHO05D007406 1.9e-140 503.4 505 59.8
Duzib084G0413 Durio zibethinus HOM05D000181 ORTHO05D007406 2.5e-140 503.1 457 60.4
PSO170G1750 Papaver somniferum HOM05D000181 ORTHO05D007406 3.3e-140 502.7 486 58.4
ClCG07G011510 Citrullus lanatus HOM05D000181 ORTHO05D007406 1.3e-139 500.7 491 58.7
RcHm_v2.0_Chr7g0194221 Rosa chinensis HOM05D000181 ORTHO05D007406 2.8e-139 499.6 491 58.5
PSO063G6474 Papaver somniferum HOM05D000181 ORTHO05D007406 1.8e-138 496.9 486 58.2
MD06G1109500 Malus domestica HOM05D000181 ORTHO05D007406 2.4e-138 496.5 488 57.6
Atru.chr9.1924 Acer truncatum HOM05D000181 ORTHO05D007406 1.7e-136 490.3 480 57.7
Peaxi162Scf00074g00741 Petunia axillaris HOM05D000181 ORTHO05D007406 2.2e-136 490.0 457 62.4
GSVIVG01019239001 Vitis vinifera HOM05D000181 ORTHO05D007406 8.4e-136 488.0 421 64.8
Nn1g00249 Nelumbo nucifera HOM05D000181 ORTHO05D007406 2.5e-135 486.5 472 59.1
Potri.001G089800 Populus trichocarpa HOM05D000181 ORTHO05D007406 4.2e-135 485.7 453 60.7
Sabra01G0066200 Salix brachista HOM05D000181 ORTHO05D007406 2.7e-134 483.0 462 59.7
PGR031G3953 Punica granatum HOM05D000181 ORTHO05D007406 3.5e-134 482.6 415 63.9
Lj4g0006821 Lotus japonicus HOM05D000181 ORTHO05D007406 4.6e-134 482.3 470 57.2
Lj2A164T57 Lonicera japonica HOM05D000181 ORTHO05D007406 1.3e-133 480.7 500 56.6
CAN.G567.9 Capsicum annuum HOM05D000181 ORTHO05D007406 2.3e-133 479.9 485 58.1
Sed0021063 Sechium edule HOM05D000181 ORTHO05D007406 1.5e-132 477.2 491 55.8
Carub.0007s1714 Capsella rubella HOM05D000181 ORTHO05D007406 4.3e-132 475.7 458 58.1
Thhalv10024337m.g Eutrema salsugineum HOM05D000181 ORTHO05D007406 2.1e-131 473.4 458 56.6
TWI60G1246 Tripterygium wilfordii HOM05D000181 ORTHO05D007406 3.7e-131 472.6 461 57.7
Ciclev10018718m.g Citrus clementina HOM05D000181 ORTHO05D007406 6.3e-131 471.9 483 55.9
CANSAT21G0203 Cannabis sativa HOM05D000181 ORTHO05D007406 1.1e-130 471.1 491 56.2
AT4G23940 Arabidopsis thaliana HOM05D000181 ORTHO05D007406 1.4e-130 470.7 450 58.7
AUR62019859 Chenopodium quinoa HOM05D000181 ORTHO05D007406 1.4e-130 470.7 492 56.7
AL7G29370 Arabidopsis lyrata HOM05D000181 ORTHO05D007406 1.8e-130 470.3 470 56.8
FAN04G1057 Fragaria x ananassa HOM05D002356 ORTHO05D007406 5.3e-130 468.8 487 57.3
Aa31LG6G7180 Aethionema arabicum HOM05D000181 ORTHO05D007406 6.9e-130 468.4 461 56.2
Lalb_Chr16g0390691 Lupinus albus HOM05D000181 ORTHO05D007406 9.0e-130 468.0 417 59.0
CARHR231350 Cardamine hirsuta HOM05D000181 ORTHO05D007406 1.5e-129 467.2 458 57.4
FAN18G2731 Fragaria x ananassa HOM05D000181 ORTHO05D007406 2.6e-129 466.5 487 57.3
FvH4_5g04870 Fragaria vesca HOM05D000181 ORTHO05D007406 1.7e-128 463.8 487 57.1
FAN18G2206 Fragaria x ananassa HOM05D002356 ORTHO05D007406 3.8e-128 462.6 487 56.7
MD14G1130500 Malus domestica HOM05D000181 ORTHO05D007406 3.8e-128 462.6 488 55.1
FAN13G1079 Fragaria x ananassa HOM05D002356 ORTHO05D007406 3.2e-127 459.5 487 56.3
Sp7g21910 Schrenkiella parvula HOM05D000181 ORTHO05D007406 5.5e-127 458.8 459 55.3
CsaV3_4G006700 Cucumis sativus L. HOM05D000181 ORTHO05D007406 1.6e-126 457.2 493 54.4
Manes.02G008600 Manihot esculenta HOM05D000181 ORTHO05D007406 1.6e-126 457.2 460 57.8
FAN08G0678 Fragaria x ananassa HOM05D002356 ORTHO05D007406 3.5e-126 456.1 487 56.3
EL10Ac5g12935 Beta vulgaris HOM05D000181 ORTHO05D007406 6.1e-126 455.3 491 55.0
VMungo0251G1494 Vigna mungo HOM05D000181 ORTHO05D007406 1.3e-125 454.1 478 54.8
Glyma.08G023900 Glycine max HOM05D000181 ORTHO05D007406 3.0e-125 453.0 476 53.4
MBI07_g46373_MAGBIO Magnolia biondii HOM05D000181 ORTHO05D007406 3.9e-125 452.6 468 57.5
AUR62010860 Chenopodium quinoa HOM05D000181 ORTHO05D007406 1.1e-124 451.1 492 55.3
Aqoxy5G04277 Aquilegia oxysepala HOM05D000181 ORTHO05D007406 9.7e-124 448.0 488 54.1
Peaxi162Scf00074g00638 Petunia axillaris HOM05D000181 ORTHO05D007406 6.3e-123 445.3 457 58.9
arahy.Tifrunner.gnm1.ann1.27DD66 Arachis hypogaea HOM05D000181 ORTHO05D007406 1.0e-120 438.0 472 53.0
Hund14209 Selenicereus undatus HOM05D000181 ORTHO05D007406 1.3e-120 437.6 496 53.6
arahy.Tifrunner.gnm1.ann1.K2TKXN Arachis hypogaea HOM05D000181 ORTHO05D007406 2.2e-120 436.8 472 53.6
Phvul.002G299700 Phaseolus vulgaris HOM05D000181 ORTHO05D007406 2.9e-120 436.4 421 56.8
ATR0602G289 Amborella trichopoda HOM05D000181 ORTHO05D007406 1.1e-119 434.5 484 54.3
Lsat_1_v5_gn_6_83680 Lactuca sativa HOM05D000181 ORTHO05D007406 5.5e-119 432.2 487 54.6
HanXRQChr13g0415441 Helianthus annuus HOM05D000181 ORTHO05D007406 7.2e-119 431.8 489 53.8
BraA01t01465Z Brassica rapa HOM05D002356 ORTHO05D007406 5.1e-117 425.6 449 54.6
C01p19180 Brassica napus HOM05D002356 ORTHO05D007406 1.5e-116 424.1 449 54.3
A01p15250 Brassica napus HOM05D002356 ORTHO05D007406 1.7e-115 420.6 449 54.1
BcaC09g50928 Brassica carinata HOM05D000181 ORTHO05D007406 3.7e-115 419.5 449 53.9
BolC1t01844H Brassica oleracea HOM05D002356 ORTHO05D007406 3.7e-115 419.5 449 53.9
BcaNung01101 Brassica carinata HOM05D000181 ORTHO05D007406 5.3e-114 415.6 447 53.5
Ca_17471_v3 Cicer arietinum L. HOM05D000181 ORTHO05D007406 5.3e-114 415.6 468 49.4
SGA_v2.0_scaffold305G47993 Striga asiatica HOM05D000181 ORTHO05D007406 9.1e-114 414.8 466 51.3
Medtr8g099605 Medicago truncatula HOM05D000181 ORTHO05D007406 1.1e-111 407.9 467 48.0
TPR.G3384 Trifolium pratense HOM05D000181 ORTHO05D007406 1.0e-109 401.4 472 48.1
Cpa.g.sc79.12 Carica papaya HOM05D000181 ORTHO05D007406 9.7e-108 394.8 383 59.3
Ah.12g052670 Amaranthus hybridus HOM05D000181 ORTHO05D007406 1.3e-104 384.4 468 51.9
Gohir.D08G125332 Gossypium hirsutum HOM05D000181 ORTHO05D007406 1.1e-98 364.8 403 54.1
DCAR_029910 Daucus carota HOM05D000181 ORTHO05D007406 2.4e-98 363.6 419 53.7
COL.COLO4_10722 Corchorus olitorius HOM05D000181 ORTHO05D007406 1.2e-97 361.3 487 46.2
CiPaw.11G119200 Carya illinoinensis HOM05D000181 ORTHO05D007406 5.5e-95 352.4 316 60.4
MELO3C016278.2 Cucumis melo HOM05D000181 ORTHO05D007406 2.8e-91 340.1 300 62.3
MBI07_g14279_MAGBIO Magnolia biondii HOM05D000181 ORTHO05D007406 4.7e-86 322.8 443 47.0
ECA240G1581 Erigeron canadensis HOM05D000181 ORTHO05D007406 7.5e-84 315.5 340 51.8
unitig_37.g12129 Utricularia gibba HOM05D000181 ORTHO05D007406 2.1e-78 297.4 336 48.2
CDE04G1864 Ceratophyllum demersum HOM05D000181 ORTHO05D007406 5.4e-74 282.7 269 56.9
HPP92_024173 Vanilla planifolia HOM05D000181 ORTHO05D007406 7.8e-73 278.9 299 51.8
Dinv37517 Davidia involucrata HOM05D000181 ORTHO05D007406 2.3e-69 267.3 183 74.9
AagrBONN_evm.TU.Sc2ySwM_362.2662 Anthoceros agrestis HOM05D000181 ORTHO05D007406 5.4e-66 256.1 491 34.4
Mapoly0052s0067 Marchantia polymorpha HOM05D000181 ORTHO05D007406 7.0e-66 255.8 483 34.8
MBI07_g46802_MAGBIO Magnolia biondii HOM05D000181 ORTHO05D007406 3.4e-60 236.9 353 45.3
Pp3c22_8480 Physcomitrium patens HOM05D000181 ORTHO05D007406 8.3e-59 232.3 434 35.0
Pp3c19_2770 Physcomitrium patens HOM05D000181 ORTHO05D007406 2.7e-57 227.3 445 35.7
Psat0s1312g0080 Pisum sativum HOM05D000181 ORTHO05D007406 7.8e-57 225.7 180 62.8
SMO147G0268 Selaginella moellendorffii HOM05D000181 ORTHO05D007406 4.0e-53 213.4 420 36.4
Oeu009976.1 Olea europaea HOM05D000181 ORTHO05D007406 5.8e-52 209.5 280 45.4
MELO3C001406.2 Cucumis melo HOM05D000181 ORTHO05D007406 3.8e-51 206.8 264 50.4
HPP92_027157 Vanilla planifolia HOM05D000181 ORTHO05D007406 1.4e-42 178.3 236 43.6
SEGI_35200 Sequoiadendron giganteum HOM05D000181 ORTHO05D007406 1.8e-29 134.8 219 35.2
unitig_37.g12128 Utricularia gibba HOM05D000074 ORTHO05D007406 4.8e-22 110.2 59 88.1
Cpa.g.sc79.11 Carica papaya HOM05D000181 ORTHO05D007406 8.1e-22 109.4 60 85.0
Gohir.D08G125266 Gossypium hirsutum HOM05D000181 ORTHO05D007406 1.4e-21 108.6 59 86.4
Dinv37518 Davidia involucrata HOM05D000181 ORTHO05D182714 6.7e-16 89.7 212 36.3
SEGI_35926 Sequoiadendron giganteum HOM05D000181 ORTHO05D007406 1.9e-15 88.2 77 55.8
Gohir.A12G183400 Gossypium hirsutum HOM05D000181 ORTHO05D007406 1.3e-11 75.5 55 72.7
Medtr2g095900 Medicago truncatula HOM05D000310 ORTHO05D265259 9.3e-10 69.3 130 34.6


User provided reference genes

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