Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0016714 Camellia sinensis var. sinensis HOM05D008222 ORTHO05D010364 0.0e+00 1379.8 781 100.0
Dinv31739 Davidia involucrata HOM05D008222 ORTHO05D010364 3.8e-215 752.3 727 65.9
TAR633G2678 Trochodendron aralioides HOM05D008222 ORTHO05D010364 1.3e-143 514.6 729 50.3
QL07p037571 Quercus lobata HOM05D008222 ORTHO05D010364 2.7e-136 490.3 726 49.3
Cfa016663 Carpinus fangiana HOM05D008222 ORTHO05D010364 3.5e-136 490.0 725 47.9
Haze_19673 Corylus avellana HOM05D008222 ORTHO05D010364 7.7e-136 488.8 723 46.7
TAR636G2750 Trochodendron aralioides HOM05D008222 ORTHO05D010364 1.2e-133 481.5 725 48.7
Lj1C1035T2 Lonicera japonica HOM05D008222 ORTHO05D010364 2.0e-131 474.2 723 45.4
GSVIVG01033924001 Vitis vinifera HOM05D008222 ORTHO05D010364 1.1e-129 468.4 722 46.3
Potri.006G205800 Populus trichocarpa HOM05D008222 ORTHO05D010364 2.0e-128 464.2 725 48.0
COL.COLO4_29620 Corchorus olitorius HOM05D008222 ORTHO05D010364 5.0e-127 459.5 729 48.3
Thecc.05G099900 Theobroma cacao HOM05D008222 ORTHO05D010364 1.9e-126 457.6 721 43.1
Sabra06G0158800 Salix brachista HOM05D008222 ORTHO05D010364 7.3e-126 455.7 727 48.7
Nn6g34773 Nelumbo nucifera HOM05D008222 ORTHO05D010364 4.9e-122 443.0 728 47.3
CiPaw.10G014900 Carya illinoinensis HOM05D008222 ORTHO05D010364 8.6e-119 432.2 725 45.8
Cpa.g.sc104.69 Carica papaya HOM05D008222 ORTHO05D010364 7.3e-118 429.1 734 44.3
Manes.09G049300 Manihot esculenta HOM05D008222 ORTHO05D010364 2.6e-115 420.6 720 44.0
Ciclev10011213m.g Citrus clementina HOM05D008222 ORTHO05D010364 1.2e-112 411.8 721 43.4
Oeu060355.1 Olea europaea HOM05D008222 ORTHO05D010364 1.6e-109 401.4 722 40.0
Atru.chr8.1411 Acer truncatum HOM05D008222 ORTHO05D010364 1.2e-107 395.2 771 38.0
TWI77G0950 Tripterygium wilfordii HOM05D008222 ORTHO05D010364 3.4e-99 367.1 736 40.5
CANSAT64G2035 Cannabis sativa HOM05D008222 ORTHO05D010364 4.4e-99 366.7 783 37.5
Oeu010753.1 Olea europaea HOM05D008222 ORTHO05D010364 1.6e-93 348.2 724 35.8
DCAR_020725 Daucus carota HOM05D008222 ORTHO05D010364 3.5e-88 330.5 729 35.9
Oeu010756.1 Olea europaea HOM05D008222 ORTHO05D010364 3.5e-88 330.5 723 34.6
CiPaw.09G018200 Carya illinoinensis HOM05D008222 ORTHO05D010364 6.0e-88 329.7 619 42.2
MSTRG.10386 Avicennia marina HOM05D008222 ORTHO05D010364 7.9e-88 329.3 725 34.3
MBI17_g16777_MAGBIO Magnolia biondii HOM05D008222 ORTHO05D010364 2.5e-86 324.3 724 41.9
FAN14G0765 Fragaria x ananassa HOM05D008222 ORTHO05D010364 4.8e-85 320.1 727 40.2
FvH4_6g19810 Fragaria vesca HOM05D008222 ORTHO05D010364 2.4e-84 317.8 722 40.0
Glyma.02G200000 Glycine max HOM05D008222 ORTHO05D010364 3.4e-83 313.9 726 37.7
FAN05G0526 Fragaria x ananassa HOM05D008222 ORTHO05D010364 6.4e-82 309.7 721 39.8
Glyma.10G076700 Glycine max HOM05D008222 ORTHO05D010364 1.6e-80 305.1 726 40.2
Lj5g0010690 Lotus japonicus HOM05D008222 ORTHO05D010364 1.6e-80 305.1 729 40.1
FAN05G0780 Fragaria x ananassa HOM05D008222 ORTHO05D010364 4.6e-80 303.5 721 39.9
FAN02G2041 Fragaria x ananassa HOM05D008222 ORTHO05D010364 1.0e-79 302.4 721 39.9
Phvul.007G270200 Phaseolus vulgaris HOM05D008222 ORTHO05D010364 3.3e-78 297.4 723 38.0
FAN09G4126 Fragaria x ananassa HOM05D008222 ORTHO05D010364 1.3e-77 295.4 727 39.6
RcHm_v2.0_Chr3g0475181 Rosa chinensis HOM05D008222 ORTHO05D010364 1.4e-76 292.0 718 38.3
VMungo0720G0042 Vigna mungo HOM05D008222 ORTHO05D010364 2.7e-72 277.7 723 39.0
TPR.G8743 Trifolium pratense HOM05D008222 ORTHO05D010364 6.0e-72 276.6 733 34.1
Hund03869 Selenicereus undatus HOM05D008222 ORTHO05D010364 3.9e-71 273.9 794 34.4
MD12G1033800 Malus domestica HOM05D008222 ORTHO05D010364 2.2e-66 258.1 616 36.7
Sc20g0006580 Simmondsia chinensis HOM05D008222 ORTHO05D010364 4.3e-62 243.8 722 36.3
EL10Ac7g16820 Beta vulgaris HOM05D008222 ORTHO05D010364 2.8e-61 241.1 813 34.3
Aqoxy4G02694 Aquilegia oxysepala HOM05D008222 ORTHO05D010364 2.0e-59 235.0 750 33.1
Medtr1g058110 Medicago truncatula HOM05D008222 ORTHO05D010364 7.2e-57 226.5 732 37.2
AUR62006264 Chenopodium quinoa HOM05D008222 ORTHO05D010364 1.8e-55 221.9 745 29.9
HPP92_009786 Vanilla planifolia HOM05D008222 ORTHO05D010364 5.1e-55 220.3 717 35.7
AUR62028514 Chenopodium quinoa HOM05D008222 ORTHO05D010364 2.6e-51 208.0 849 32.5
SGA_v2.0_scaffold184G40000 Striga asiatica HOM05D008222 ORTHO05D010364 7.7e-51 206.5 715 30.8
Oeu010754.1 Olea europaea HOM05D008222 ORTHO05D010364 1.8e-44 185.3 552 30.3
ATR0772G019 Amborella trichopoda HOM05D008222 ORTHO05D010364 1.2e-43 182.6 764 33.0
ECA233G4923 Erigeron canadensis HOM05D008222 ORTHO05D010364 1.6e-40 172.2 330 36.7
CDE06G1815 Ceratophyllum demersum HOM05D008222 ORTHO05D010364 1.2e-38 166.0 717 31.7
SEGI_05246 Sequoiadendron giganteum HOM05D008222 ORTHO05D010364 8.2e-37 159.8 773 31.6
CDE08G0440 Ceratophyllum demersum HOM05D008222 ORTHO05D010364 8.5e-34 149.8 716 34.4
unitig_8.g3557 Utricularia gibba HOM05D008222 ORTHO05D010364 3.7e-29 134.4 302 32.5
Lalb_Chr02g0154681 Lupinus albus HOM05D008222 ORTHO05D010364 3.1e-20 104.8 201 38.8
Os02g0536400 Oryza sativa ssp. japonica HOM05D008222 ORTHO05D010364 2.7e-19 101.7 738 27.9
AagrBONN_evm.TU.Sc2ySwM_368.1895 Anthoceros agrestis HOM05D008222 ORTHO05D010364 1.6e-11 75.9 82 45.1
Oeu017707.1 Olea europaea HOM05D008222 ORTHO05D010364 9.5e-09 66.6 150 34.0
Psat6g082000 Pisum sativum HOM05D008222 ORTHO05D010364 8.0e-08 63.5 41 65.9


User provided reference genes

Program Settings