Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0016540 Camellia sinensis var. sinensis HOM05D004683 ORTHO05D005388 5.4e-210 734.2 396 100.0
Actinidia11898 Actinidia chinensis HOM05D004683 ORTHO05D005388 7.9e-145 517.7 397 74.8
Actinidia39280 Actinidia chinensis HOM05D004683 ORTHO05D005388 3.0e-144 515.8 395 74.2
CSS0018655 Camellia sinensis var. sinensis HOM05D004683 ORTHO05D005388 1.4e-141 506.9 394 74.4
Dinv04407 Davidia involucrata HOM05D004683 ORTHO05D005388 4.1e-133 478.8 344 80.5
TAR626G1909 Trochodendron aralioides HOM05D004683 ORTHO05D005388 8.2e-126 454.5 401 67.1
Nn1g07478 Nelumbo nucifera HOM05D004683 ORTHO05D005388 5.2e-120 435.3 402 66.2
Hma1.2p1_0657F.1_g196900 Hydrangea macrophylla HOM05D004683 ORTHO05D005388 1.2e-116 424.1 399 65.7
Sed0018998 Sechium edule HOM05D004683 ORTHO05D005388 6.1e-113 411.8 392 64.0
ClCG01G010700 Citrullus lanatus HOM05D004683 ORTHO05D005388 1.4e-112 410.6 397 63.5
CSS0042800 Camellia sinensis var. sinensis HOM05D004683 ORTHO05D005388 3.0e-112 409.5 319 75.9
GSVIVG01007216001 Vitis vinifera HOM05D004683 ORTHO05D005388 5.2e-112 408.7 322 71.1
CsaV3_UNG061480 Cucumis sativus L. HOM05D004683 ORTHO05D005388 6.7e-112 408.3 394 63.5
Prupe.4G006700 Prunus persica HOM05D004683 ORTHO05D005388 3.3e-111 406.0 395 62.5
Potri.006G017200 Populus trichocarpa HOM05D004683 ORTHO05D005388 5.7e-111 405.2 400 60.8
RcHm_v2.0_Chr5g0000761 Rosa chinensis HOM05D004683 ORTHO05D005388 7.5e-111 404.8 391 62.1
MELO3C025532.2 Cucumis melo HOM05D004683 ORTHO05D005388 1.7e-110 403.7 404 61.9
Duzib160G0680 Durio zibethinus HOM05D004683 ORTHO05D005388 2.2e-110 403.3 394 61.2
MD10G1336700 Malus domestica HOM05D004683 ORTHO05D005388 7.0e-109 398.3 395 62.5
Manes.09G081701 Manihot esculenta HOM05D004683 ORTHO05D005388 9.1e-109 397.9 403 61.3
Cfa000066 Carpinus fangiana HOM05D004683 ORTHO05D005388 1.6e-108 397.1 404 60.4
Lj2A259T33 Lonicera japonica HOM05D004683 ORTHO05D005388 3.5e-108 396.0 397 61.5
Duzib235G0361 Durio zibethinus HOM05D004683 ORTHO05D005388 2.2e-107 393.3 393 59.3
Nitab4.5_0001668g0040 Nicotiana tabacum HOM05D004683 ORTHO05D005388 8.5e-107 391.3 407 61.2
Sabra06G0012200 Salix brachista HOM05D004683 ORTHO05D005388 1.5e-106 390.6 399 60.2
PGSC0003DMG400013358 Solanum tuberosum HOM05D004683 ORTHO05D005388 7.2e-106 388.3 410 57.8
Rhsim02G0091200 Rhododendron simsii HOM05D004683 ORTHO05D005388 9.4e-106 387.9 402 61.7
MBI19_g44082_MAGBIO Magnolia biondii HOM05D004683 ORTHO05D005388 1.2e-105 387.5 407 60.4
Potri.016G008400 Populus trichocarpa HOM05D004683 ORTHO05D005388 1.2e-105 387.5 400 59.2
Solyc11g012610.2 Solanum lycopersicum HOM05D004683 ORTHO05D005388 1.2e-105 387.5 409 58.2
CsaV3_1G015800 Cucumis sativus L. HOM05D004683 ORTHO05D005388 6.1e-105 385.2 378 61.9
CiPaw.09G105900 Carya illinoinensis HOM05D004683 ORTHO05D005388 1.2e-103 380.9 408 60.0
CAN.G696.10 Capsicum annuum HOM05D004683 ORTHO05D005388 5.7e-103 378.6 411 57.2
Peaxi162Scf00352g01036 Petunia axillaris HOM05D004683 ORTHO05D005388 1.3e-102 377.5 402 58.7
PSO541G4951 Papaver somniferum HOM05D004683 ORTHO05D005388 5.9e-100 368.6 418 56.9
CANSAT56G4109 Cannabis sativa HOM05D004683 ORTHO05D005388 1.7e-99 367.1 405 56.8
FvH4_3g00551 Fragaria vesca HOM05D004683 ORTHO05D005388 1.7e-99 367.1 395 58.5
PSO675G6369 Papaver somniferum HOM05D004683 ORTHO05D005388 1.7e-99 367.1 418 56.9
Aqoxy4G02236 Aquilegia oxysepala HOM05D004683 ORTHO05D005388 6.6e-99 365.2 403 56.6
MD00G1058000 Malus domestica HOM05D004683 ORTHO05D005388 6.6e-99 365.2 392 59.2
PGR004G0928 Punica granatum HOM05D004683 ORTHO05D005388 1.5e-98 364.0 407 56.3
COL.COLO4_15259 Corchorus olitorius HOM05D004683 ORTHO05D005388 1.9e-98 363.6 395 56.2
FAN25G2373 Fragaria x ananassa HOM05D004683 ORTHO05D005388 1.8e-96 357.1 393 58.0
Sabra16G0012800 Salix brachista HOM05D004683 ORTHO05D005388 8.9e-96 354.8 418 55.5
Thecc.06G237400 Theobroma cacao HOM05D004683 ORTHO05D005388 8.9e-96 354.8 392 54.6
Atru.chr1.2335 Acer truncatum HOM05D004683 ORTHO05D005388 1.5e-95 354.0 398 55.8
Gohir.A10G008300 Gossypium hirsutum HOM05D004683 ORTHO05D005388 3.4e-95 352.8 356 58.7
Oeu052851.1 Olea europaea HOM05D004683 ORTHO05D005388 7.5e-95 351.7 316 68.0
vmacro15736 Vaccinium macrocarpon HOM05D004683 ORTHO05D005388 2.8e-94 349.7 407 57.2
Gohir.D10G008100 Gossypium hirsutum HOM05D004683 ORTHO05D005388 3.7e-94 349.4 356 58.7
Gorai.011G008800 Gossypium raimondii HOM05D004683 ORTHO05D005388 6.3e-94 348.6 356 58.4
Lsat_1_v5_gn_7_14120 Lactuca sativa HOM05D004683 ORTHO05D005388 8.3e-94 348.2 401 58.9
Cc09_g00590 Coffea canephora HOM05D004683 ORTHO05D005388 1.1e-93 347.8 329 62.3
CSS0001859 Camellia sinensis var. sinensis HOM05D004683 ORTHO05D005388 7.0e-93 345.1 198 99.5
CSS0027604 Camellia sinensis var. sinensis HOM05D004683 ORTHO05D005388 7.0e-93 345.1 198 99.5
Gorai.010G188900 Gossypium raimondii HOM05D004683 ORTHO05D005388 7.0e-93 345.1 395 54.9
Oeu052866.1 Olea europaea HOM05D004683 ORTHO05D005388 1.6e-92 344.0 345 62.9
Phvul.006G141000 Phaseolus vulgaris HOM05D004683 ORTHO05D005388 2.0e-92 343.6 391 56.3
Gohir.D06G161900 Gossypium hirsutum HOM05D004683 ORTHO05D005388 4.5e-92 342.4 395 54.4
Gohir.A06G155500 Gossypium hirsutum HOM05D004683 ORTHO05D005388 5.9e-92 342.0 399 54.1
PGSC0003DMG400023555 Solanum tuberosum HOM05D004683 ORTHO05D005388 1.7e-91 340.5 407 55.0
Peaxi162Scf01544g00025 Petunia axillaris HOM05D004683 ORTHO05D005388 1.1e-90 337.8 313 62.3
QL05p068304 Quercus lobata HOM05D004683 ORTHO05D005388 1.1e-90 337.8 410 54.6
Lj6g0001835 Lotus japonicus HOM05D004683 ORTHO05D005388 1.5e-90 337.4 399 55.1
Haze_06980 Corylus avellana HOM05D004683 ORTHO05D005388 1.2e-89 334.3 410 53.2
DCAR_030854 Daucus carota HOM05D004683 ORTHO05D005388 3.6e-89 332.8 394 55.8
THA.LOC104806735 Tarenaya hassleriana HOM05D004683 ORTHO05D005388 1.0e-88 331.3 384 56.5
QL05p068796 Quercus lobata HOM05D004683 ORTHO05D005388 1.4e-88 330.9 404 53.2
Sc05g0009730 Simmondsia chinensis HOM05D004683 ORTHO05D005388 2.3e-88 330.1 385 55.6
Eucgr.D01443 Eucalyptus grandis HOM05D004683 ORTHO05D005388 3.1e-88 329.7 408 54.9
CSS0022133 Camellia sinensis var. sinensis HOM05D004683 ORTHO05D005388 7.5e-87 325.1 210 91.0
Oeu030103.1 Olea europaea HOM05D004683 ORTHO05D005388 7.5e-87 325.1 347 56.2
SalBow8G0627 Salvia bowleyana HOM05D004683 ORTHO05D005388 9.8e-87 324.7 421 53.4
SGA_v2.0_scaffold7G03714 Striga asiatica HOM05D004683 ORTHO05D005388 4.9e-86 322.4 343 58.9
ATR0624G003 Amborella trichopoda HOM05D004683 ORTHO05D005388 3.2e-85 319.7 371 55.3
TWI38G0781 Tripterygium wilfordii HOM05D004683 ORTHO05D005388 9.2e-85 318.2 397 53.4
Nitab4.5_0004646g0030 Nicotiana tabacum HOM05D004683 ORTHO05D005388 1.0e-83 314.7 400 52.5
CDE04G2289 Ceratophyllum demersum HOM05D004683 ORTHO05D005388 1.1e-82 311.2 327 58.4
TWI63G0041 Tripterygium wilfordii HOM05D004683 ORTHO05D005388 1.1e-82 311.2 396 52.8
Lsat_1_v5_gn_0_24381 Lactuca sativa HOM05D004683 ORTHO05D005388 1.5e-82 310.8 357 56.3
Lalb_Chr15g0088101 Lupinus albus HOM05D004683 ORTHO05D005388 1.5e-82 310.8 395 52.9
Migut.M01430 Erythranthe guttata HOM05D004683 ORTHO05D005388 9.5e-82 308.1 399 52.9
HanXRQChr15g0470281 Helianthus annuus HOM05D004683 ORTHO05D005388 2.1e-81 307.0 370 56.8
AUR62021828 Chenopodium quinoa HOM05D004683 ORTHO05D005388 8.0e-81 305.1 398 49.2
Sopen04g006980 Solanum pennellii HOM05D004683 ORTHO05D005388 1.1e-80 304.7 400 51.5
arahy.Tifrunner.gnm1.ann1.L4TARN Arachis hypogaea HOM05D004683 ORTHO05D005388 8.9e-80 301.6 398 50.3
Solyc04g014850.3 Solanum lycopersicum HOM05D004683 ORTHO05D005388 8.9e-80 301.6 400 51.0
AUR62012829 Chenopodium quinoa HOM05D004683 ORTHO05D005388 3.4e-79 299.7 401 48.4
arahy.Tifrunner.gnm1.ann1.5M71YA Arachis hypogaea HOM05D004683 ORTHO05D005388 7.5e-79 298.5 398 50.0
Medtr2g026550 Medicago truncatula HOM05D004683 ORTHO05D005388 9.8e-79 298.1 391 53.7
EL10Ac8g20240 Beta vulgaris HOM05D004683 ORTHO05D005388 4.9e-78 295.8 400 48.8
Hund21139 Selenicereus undatus HOM05D004683 ORTHO05D005388 3.5e-76 289.7 402 50.0
TAR341G0001 Trochodendron aralioides HOM05D004683 ORTHO05D005388 3.9e-75 286.2 275 65.1
TAR485G0001 Trochodendron aralioides HOM05D004683 ORTHO05D005388 3.9e-75 286.2 275 65.1
CSS0022243 Camellia sinensis var. sinensis HOM05D004683 ORTHO05D005388 4.3e-74 282.7 201 84.1
Ah.14g087460 Amaranthus hybridus HOM05D004683 ORTHO05D005388 5.6e-74 282.3 402 48.3
CSS0042721 Camellia sinensis var. sinensis HOM05D004683 ORTHO05D005388 1.2e-73 281.2 201 83.6
CSS0004114 Camellia sinensis var. sinensis HOM05D004683 ORTHO05D005388 1.6e-73 280.8 201 83.6
TPR.G10575 Trifolium pratense HOM05D004683 ORTHO05D005388 1.6e-73 280.8 388 51.0
CSS0009085 Camellia sinensis var. sinensis HOM05D004683 ORTHO05D005388 3.6e-73 279.6 201 83.1
CSS0017523 Camellia sinensis var. sinensis HOM05D004683 ORTHO05D005388 4.7e-73 279.3 201 83.1
CSS0049827 Camellia sinensis var. sinensis HOM05D004683 ORTHO05D005388 1.1e-72 278.1 201 83.1
Glyma.15G117000 Glycine max HOM05D004683 ORTHO05D005388 5.2e-72 275.8 391 48.3
Psat1g173720 Pisum sativum HOM05D004683 ORTHO05D005388 3.4e-71 273.1 394 50.3
Glyma.09G012400 Glycine max HOM05D004683 ORTHO05D005388 4.4e-71 272.7 396 48.2
VMungo0540G0168 Vigna mungo HOM05D004683 ORTHO05D005388 1.4e-69 267.7 390 47.7
CDE06G0298 Ceratophyllum demersum HOM05D000165 ORTHO05D005388 9.2e-69 265.0 293 58.0
Aa31LG6G60 Aethionema arabicum HOM05D004683 ORTHO05D005388 2.7e-68 263.5 389 47.8
CSS0011389 Camellia sinensis var. sinensis HOM05D004683 ORTHO05D005388 2.3e-67 260.4 126 100.0
HPP92_014031 Vanilla planifolia HOM05D004683 ORTHO05D005388 7.3e-66 255.4 380 46.3
CSS0019011 Camellia sinensis var. sinensis HOM05D004683 ORTHO05D005388 2.1e-65 253.8 201 78.6
Cpa.g.sc27.252 Carica papaya HOM05D004683 ORTHO05D005388 2.1e-65 253.8 311 55.6
Sabra16G0012500 Salix brachista HOM05D004683 ORTHO05D005388 8.1e-65 251.9 276 59.1
Ciclev10017876m.g Citrus clementina HOM05D004683 ORTHO05D005388 6.8e-64 248.8 400 46.8
Ah.09g234040 Amaranthus hybridus HOM05D004683 ORTHO05D005388 1.7e-62 244.2 347 48.7
HPP92_028363 Vanilla planifolia HOM05D004683 ORTHO05D005388 3.8e-62 243.0 403 43.7
Thhalv10025641m.g Eutrema salsugineum HOM05D004683 ORTHO05D005388 6.4e-62 242.3 393 48.1
CARHR223850 Cardamine hirsuta HOM05D004683 ORTHO05D005388 1.9e-61 240.7 346 52.6
BcaC09g50454 Brassica carinata HOM05D004683 ORTHO05D005388 1.2e-60 238.0 354 49.4
C01p25270 Brassica napus HOM05D004683 ORTHO05D005388 1.2e-60 238.0 354 49.4
AL7G37470 Arabidopsis lyrata HOM05D004683 ORTHO05D005388 2.1e-60 237.3 360 50.3
BolC1t02477H Brassica oleracea HOM05D004683 ORTHO05D005388 2.1e-60 237.3 354 49.2
Sp7g16950 Schrenkiella parvula HOM05D004683 ORTHO05D005388 2.7e-60 236.9 365 50.7
AT4G17240 Arabidopsis thaliana HOM05D004683 ORTHO05D005388 3.5e-60 236.5 361 50.4
MSTRG.7144 Avicennia marina HOM05D004683 ORTHO05D005388 3.5e-60 236.5 251 57.8
Carub.0007s2417 Capsella rubella HOM05D004683 ORTHO05D005388 3.5e-60 236.5 384 49.0
BraA01t01938Z Brassica rapa HOM05D004683 ORTHO05D005388 4.6e-60 236.1 359 49.9
A01p20140 Brassica napus HOM05D004683 ORTHO05D005388 6.0e-60 235.7 341 51.6
Ca_00746_v3 Cicer arietinum L. HOM05D004683 ORTHO05D005388 2.5e-58 230.3 308 50.3
Nitab4.5_0001109g0120 Nicotiana tabacum HOM05D004683 ORTHO05D005388 4.3e-58 229.6 400 43.8
SEGI_35929 Sequoiadendron giganteum HOM05D004683 ORTHO05D005388 8.1e-57 225.3 366 44.5
Sopen11g007340 Solanum pennellii HOM05D004683 ORTHO05D005388 1.5e-55 221.1 171 67.8
CAN.G1263.24 Capsicum annuum HOM05D004683 ORTHO05D005388 3.8e-54 216.5 345 46.1
unitig_37.g12183 Utricularia gibba HOM05D004683 ORTHO05D005388 1.1e-50 204.9 219 56.2
ECA246G4668 Erigeron canadensis HOM05D004683 ORTHO05D005388 4.8e-49 199.5 292 47.9
Zm00001eb214850 Zea mays HOM05D004683 ORTHO05D005388 2.1e-44 184.1 368 39.9
Zm00001eb057420 Zea mays HOM05D004683 ORTHO05D005388 1.5e-42 177.9 411 37.7
CDE04G1899 Ceratophyllum demersum HOM05D004683 ORTHO05D005388 1.3e-38 164.9 395 39.7
PSO339G0967 Papaver somniferum HOM05D004683 ORTHO05D005388 1.8e-35 154.5 106 75.5
BcaNung00108 Brassica carinata HOM05D004683 ORTHO05D005388 6.7e-35 152.5 256 47.7
MSTRG.16041 Avicennia marina HOM05D004683 ORTHO05D005388 3.7e-33 146.7 175 54.9
MSTRG.14824 Avicennia marina HOM05D004683 ORTHO05D005388 8.2e-33 145.6 118 70.3
CDE07G1645 Ceratophyllum demersum HOM05D004683 ORTHO05D005388 1.7e-30 137.9 261 41.0
Os03g0750900 Oryza sativa ssp. japonica HOM05D004683 ORTHO05D005388 1.2e-28 131.7 216 44.4
Sopen00g010710 Solanum pennellii HOM05D004683 ORTHO05D005388 3.0e-27 127.1 214 46.3
COL.COLO4_30227 Corchorus olitorius HOM05D001156 ORTHO05D001006 6.9e-16 89.4 100 58.0
A09p40660 Brassica napus HOM05D004683 ORTHO05D005388 3.2e-13 80.5 74 66.2
FAN11G0338 Fragaria x ananassa HOM05D004683 ORTHO05D035386 4.7e-12 76.6 91 56.0
SMO351G0434 Selaginella moellendorffii HOM05D025386 ORTHO05D005388 6.1e-12 76.3 189 34.4
Os05g0547100 Oryza sativa ssp. japonica HOM05D004683 ORTHO05D005388 1.4e-11 75.1 159 40.3
Sabra19G0093600 Salix brachista HOM05D000057 ORTHO05D005388 1.7e-09 68.2 83 56.6
Zm00001eb365900 Zea mays HOM05D004683 ORTHO05D005388 1.7e-09 68.2 148 35.8
SEGI_33504 Sequoiadendron giganteum HOM05D004683 ORTHO05D005388 3.7e-09 67.0 113 36.3
AagrBONN_evm.TU.Sc2ySwM_117.2428 Anthoceros agrestis HOM05D025386 ORTHO05D026614 1.4e-08 65.1 163 33.7
FvH4_3g38640 Fragaria vesca HOM05D037407 ORTHO05D035386 3.5e-07 60.5 71 56.3
FvH4_3g16370 Fragaria vesca HOM05D037407 ORTHO05D035386 1.7e-06 58.2 76 48.7
Actinidia07459 Actinidia chinensis HOM05D004683 ORTHO05D005388 2.9e-06 57.4 34 76.5
BcaNung00109 Brassica carinata HOM05D004683 ORTHO05D005388 3.8e-06 57.0 90 45.6


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