Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0016538 Camellia sinensis var. sinensis HOM05D007594 ORTHO05D009607 2.8e-61 238.4 119 100.0
Actinidia06215 Actinidia chinensis HOM05D007594 ORTHO05D009607 1.8e-36 156.0 109 68.8
Rhsim07G0071100 Rhododendron simsii HOM05D007594 ORTHO05D009607 1.0e-34 150.2 97 74.2
GSVIVG01036598001 Vitis vinifera HOM05D007594 ORTHO05D009607 6.7e-31 137.5 109 64.2
Hma1.2p1_1342F.1_g276950 Hydrangea macrophylla HOM05D007594 ORTHO05D009607 4.3e-30 134.8 97 72.2
Dinv03295 Davidia involucrata HOM05D007594 ORTHO05D009607 8.2e-29 130.6 97 70.1
TAR633G1990 Trochodendron aralioides HOM05D007594 ORTHO05D009607 1.5e-27 126.3 97 62.9
MD00G1152500 Malus domestica HOM05D007594 ORTHO05D009607 5.0e-26 121.3 109 57.8
CiPaw.13G016300 Carya illinoinensis HOM05D007594 ORTHO05D009607 8.4e-26 120.6 109 57.8
Peaxi162Scf02035g00032 Petunia axillaris HOM05D007594 ORTHO05D009607 1.4e-25 119.8 109 56.0
Sc11g0006300 Simmondsia chinensis HOM05D007594 ORTHO05D009607 1.4e-25 119.8 109 56.0
Duzib128G1040 Durio zibethinus HOM05D007594 ORTHO05D009607 2.5e-25 119.0 109 55.0
PGSC0003DMG400006140 Solanum tuberosum HOM05D007594 ORTHO05D009607 9.3e-25 117.1 109 52.3
Lj3g0014217 Lotus japonicus HOM05D007594 ORTHO05D009607 1.6e-24 116.3 97 57.7
MBI13_g07373_MAGBIO Magnolia biondii HOM05D007594 ORTHO05D009607 3.5e-24 115.2 97 60.8
Manes.04G156000 Manihot esculenta HOM05D007594 ORTHO05D009607 3.5e-24 115.2 109 55.0
Cc00_g06100 Coffea canephora HOM05D007594 ORTHO05D009607 4.6e-24 114.8 97 59.8
Thecc.10G140800 Theobroma cacao HOM05D007594 ORTHO05D009607 2.3e-23 112.5 109 56.0
Gohir.D10G197300 Gossypium hirsutum HOM05D007594 ORTHO05D009607 3.9e-23 111.7 109 55.0
Gorai.011G220800 Gossypium raimondii HOM05D007594 ORTHO05D009607 3.9e-23 111.7 109 55.0
Nitab4.5_0004358g0020 Nicotiana tabacum HOM05D007594 ORTHO05D009607 3.9e-23 111.7 90 61.1
Phvul.005G018200 Phaseolus vulgaris HOM05D007594 ORTHO05D009607 5.1e-23 111.3 97 55.7
Solyc07g048100.3 Solanum lycopersicum HOM05D007594 ORTHO05D009607 5.1e-23 111.3 97 54.6
Atru.chr12.1242 Acer truncatum HOM05D007594 ORTHO05D009607 6.7e-23 110.9 82 69.5
PSO339G5236 Papaver somniferum HOM05D007594 ORTHO05D009607 1.1e-22 110.2 82 61.0
DCAR_006600 Daucus carota HOM05D007594 ORTHO05D009607 1.9e-22 109.4 120 45.0
Sopen07g024530 Solanum pennellii HOM05D007594 ORTHO05D009607 2.5e-22 109.0 97 53.6
Glyma.11G170937 Glycine max HOM05D007594 ORTHO05D009607 3.3e-22 108.6 99 55.6
Gohir.A10G189500 Gossypium hirsutum HOM05D007594 ORTHO05D009607 3.3e-22 108.6 88 60.2
Nitab4.5_0004215g0020 Nicotiana tabacum HOM05D007594 ORTHO05D009607 3.3e-22 108.6 90 60.0
TPR.G20651 Trifolium pratense HOM05D007594 ORTHO05D009607 3.3e-22 108.6 109 48.6
FvH4_7g03921 Fragaria vesca HOM05D007594 ORTHO05D009607 4.3e-22 108.2 109 52.3
FAN06G1277 Fragaria x ananassa HOM05D007594 ORTHO05D009607 4.3e-22 108.2 109 52.3
Nn032s41616 Nelumbo nucifera HOM05D007594 ORTHO05D009607 7.4e-22 107.5 95 54.7
Prupe.2G044000 Prunus persica HOM05D007594 ORTHO05D009607 9.7e-22 107.1 91 57.1
CAN.G897.9 Capsicum annuum HOM05D007594 ORTHO05D009607 1.3e-21 106.7 97 54.6
Lalb_Chr24g0402821 Lupinus albus HOM05D007594 ORTHO05D009607 1.6e-21 106.3 98 58.2
FAN03G3082 Fragaria x ananassa HOM05D000688 ORTHO05D003888 2.8e-21 105.5 97 56.7
Potri.003G193100 Populus trichocarpa HOM05D007594 ORTHO05D009607 2.8e-21 105.5 109 52.3
CsaV3_5G029660 Cucumis sativus L. HOM05D007594 ORTHO05D009607 6.3e-21 104.4 97 54.6
FAN01G0543 Fragaria x ananassa HOM05D007594 ORTHO05D009607 1.1e-20 103.6 101 55.4
Lj9P657T24 Lonicera japonica HOM05D007594 ORTHO05D009607 1.1e-20 103.6 84 60.7
AUR62023865 Chenopodium quinoa HOM05D007594 ORTHO05D009607 1.4e-20 103.2 97 54.6
RcHm_v2.0_Chr1g0327541 Rosa chinensis HOM05D007594 ORTHO05D009607 1.4e-20 103.2 97 57.7
TWI63G1387 Tripterygium wilfordii HOM05D007594 ORTHO05D009607 3.1e-20 102.1 97 55.7
arahy.Tifrunner.gnm1.ann1.HR2C9L Arachis hypogaea HOM05D007594 ORTHO05D009607 5.3e-20 101.3 97 52.6
arahy.Tifrunner.gnm1.ann1.IJ2ITM Arachis hypogaea HOM05D007594 ORTHO05D009607 5.3e-20 101.3 97 52.6
Ciclev10003355m.g Citrus clementina HOM05D007594 ORTHO05D009607 6.9e-20 100.9 92 56.5
VMungo1080G0650 Vigna mungo HOM05D007594 ORTHO05D009607 9.0e-20 100.5 97 53.6
Migut.B01185 Erythranthe guttata HOM05D007594 ORTHO05D009607 2.6e-19 99.0 111 48.6
CANSAT56G2828 Cannabis sativa HOM05D007594 ORTHO05D009607 4.5e-19 98.2 83 59.0
ClCG11G013140 Citrullus lanatus HOM05D007594 ORTHO05D009607 5.9e-19 97.8 78 60.3
Medtr3g013490 Medicago truncatula HOM05D007594 ORTHO05D009607 2.9e-18 95.5 109 43.1
SGA_v2.0_scaffold124G33645 Striga asiatica HOM05D007594 ORTHO05D009607 3.8e-18 95.1 121 43.0
ATR0307G127 Amborella trichopoda HOM05D007594 ORTHO05D009607 1.1e-17 93.6 97 47.4
AUR62002319 Chenopodium quinoa HOM05D007594 ORTHO05D009607 5.5e-17 91.3 121 43.0
Psat5g215360 Pisum sativum HOM05D007594 ORTHO05D009607 5.5e-17 91.3 111 42.3
HanXRQChr05g0146261 Helianthus annuus HOM05D007594 ORTHO05D009607 9.4e-17 90.5 80 52.5
Aqoxy1G00415 Aquilegia oxysepala HOM05D007594 ORTHO05D009607 1.6e-16 89.7 97 51.5
ECA246G0181 Erigeron canadensis HOM05D007594 ORTHO05D009607 4.6e-16 88.2 120 40.0
Hma1.2p1_1730F.1_g299670 Hydrangea macrophylla HOM05D007594 ORTHO05D009607 6.1e-16 87.8 56 76.8
Os03g0811200 Oryza sativa ssp. japonica HOM05D007594 ORTHO05D009607 1.0e-15 87.0 111 44.1
Eucgr.G03206 Eucalyptus grandis HOM05D007594 ORTHO05D009607 1.8e-15 86.3 87 48.3
SalBow5G4015 Salvia bowleyana HOM05D007594 ORTHO05D009607 2.5e-14 82.4 139 36.7
vmacro13773 Vaccinium macrocarpon HOM05D007594 ORTHO05D009607 2.5e-14 82.4 55 74.5
THA.LOC104826746 Tarenaya hassleriana HOM05D007594 ORTHO05D009607 7.4e-14 80.9 68 57.4
Haze_02988 Corylus avellana HOM05D007594 ORTHO05D009607 2.2e-13 79.3 67 56.7
EL10Ac3g05954 Beta vulgaris HOM05D007594 ORTHO05D009607 3.7e-13 78.6 133 37.6
Zm00001eb062110 Zea mays HOM05D007594 ORTHO05D009607 1.4e-12 76.6 112 43.8
Aqoxy1G00418 Aquilegia oxysepala HOM05D007594 ORTHO05D009607 4.1e-12 75.1 60 58.3
vmacro13770 Vaccinium macrocarpon HOM05D007594 ORTHO05D009607 1.2e-11 73.6 54 70.4
PSO384G4678 Papaver somniferum HOM05D007594 ORTHO05D009607 2.0e-11 72.8 52 63.5
Lsat_1_v5_gn_1_118241 Lactuca sativa HOM05D007594 ORTHO05D009607 5.9e-11 71.2 71 43.7
Nn7g36922 Nelumbo nucifera HOM05D007594 ORTHO05D009607 5.9e-11 71.2 52 65.4
Sed0005696 Sechium edule HOM05D007594 ORTHO05D009607 1.3e-10 70.1 52 63.5
SEGI_38959 Sequoiadendron giganteum HOM05D007594 ORTHO05D009607 1.3e-10 70.1 72 40.3
Hund03164 Selenicereus undatus HOM05D007594 ORTHO05D009607 4.2e-09 65.1 64 46.9
Lj2g0024514 Lotus japonicus HOM05D007594 ORTHO05D009607 1.2e-08 63.5 55 54.5
unitig_22.g5331 Utricularia gibba HOM05D007594 ORTHO05D009607 2.0e-06 56.2 46 60.9


User provided reference genes

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