Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0016512 Camellia sinensis var. sinensis HOM05D006517 ORTHO05D007886 3.8e-168 594.7 294 100.0
Dinv42443 Davidia involucrata HOM05D006517 ORTHO05D007886 2.1e-126 456.1 283 79.9
CiPaw.03G198900 Carya illinoinensis HOM05D006517 ORTHO05D007886 5.9e-113 411.4 294 71.8
Atru.chr7.1806 Acer truncatum HOM05D006517 ORTHO05D007886 1.5e-111 406.8 285 70.9
GSVIVG01000273001 Vitis vinifera HOM05D006517 ORTHO05D007886 4.2e-111 405.2 284 71.1
TAR383G1010 Trochodendron aralioides HOM05D006517 ORTHO05D007886 1.2e-110 403.7 294 67.7
Oeu000272.2 Olea europaea HOM05D006517 ORTHO05D007886 1.4e-109 400.2 290 67.9
QL11p003516 Quercus lobata HOM05D006517 ORTHO05D007886 1.8e-109 399.8 290 70.0
Cfa010680 Carpinus fangiana HOM05D006517 ORTHO05D007886 2.0e-105 386.3 287 68.6
Duzib150G1397 Durio zibethinus HOM05D006517 ORTHO05D007886 4.5e-105 385.2 291 67.0
Potri.018G047000 Populus trichocarpa HOM05D006517 ORTHO05D007886 5.9e-105 384.8 290 66.2
Duzib168G1027 Durio zibethinus HOM05D006517 ORTHO05D007886 7.7e-105 384.4 286 68.5
Prupe.7G189300 Prunus persica HOM05D006517 ORTHO05D007886 1.0e-104 384.0 281 68.7
Gohir.D08G268100 Gossypium hirsutum HOM05D006517 ORTHO05D007886 1.3e-104 383.6 284 68.0
Gorai.004G285800 Gossypium raimondii HOM05D006517 ORTHO05D007886 1.3e-104 383.6 284 68.0
Manes.03G055100 Manihot esculenta HOM05D006517 ORTHO05D007886 6.6e-104 381.3 294 67.7
Actinidia39601 Actinidia chinensis HOM05D006517 ORTHO05D007886 7.3e-103 377.9 235 80.4
Actinidia39602 Actinidia chinensis HOM05D006517 ORTHO05D007886 7.3e-103 377.9 246 78.0
Lj4g0027818 Lotus japonicus HOM05D006517 ORTHO05D007886 2.1e-102 376.3 284 67.6
Thecc.09G067300 Theobroma cacao HOM05D006517 ORTHO05D007886 4.7e-102 375.2 286 67.5
Gohir.A08G246900 Gossypium hirsutum HOM05D006517 ORTHO05D007886 3.0e-101 372.5 284 66.2
Migut.J00866 Erythranthe guttata HOM05D006517 ORTHO05D007886 4.0e-101 372.1 284 65.8
COL.COLO4_21178 Corchorus olitorius HOM05D006517 ORTHO05D007886 6.8e-101 371.3 289 65.1
Lalb_Chr13g0299091 Lupinus albus HOM05D006517 ORTHO05D007886 2.0e-100 369.8 282 68.4
Medtr4g124370 Medicago truncatula HOM05D006517 ORTHO05D007886 3.4e-100 369.0 280 67.5
Nitab4.5_0000987g0010 Nicotiana tabacum HOM05D006517 ORTHO05D007886 7.5e-100 367.9 284 66.2
Glyma.13G116000 Glycine max HOM05D006517 ORTHO05D007886 2.9e-99 365.9 279 67.7
Ca_21351_v3 Cicer arietinum L. HOM05D006517 ORTHO05D007886 1.8e-98 363.2 282 68.4
Eucgr.C00754 Eucalyptus grandis HOM05D006517 ORTHO05D007886 5.4e-98 361.7 282 66.3
TPR.G12541 Trifolium pratense HOM05D006517 ORTHO05D007886 4.6e-97 358.6 280 67.5
RcHm_v2.0_Chr2g0096541 Rosa chinensis HOM05D006517 ORTHO05D007886 5.9e-97 358.2 285 63.9
Glyma.17G043800 Glycine max HOM05D006517 ORTHO05D007886 3.0e-96 355.9 279 67.0
Lsat_1_v5_gn_8_118080 Lactuca sativa HOM05D006517 ORTHO05D007886 1.9e-95 353.2 283 65.4
ClCG03G014700 Citrullus lanatus HOM05D006517 ORTHO05D007886 9.5e-95 350.9 281 64.8
PGR124G0001 Punica granatum HOM05D006517 ORTHO05D007886 1.2e-94 350.5 281 65.8
PGR142G0057 Punica granatum HOM05D006517 ORTHO05D007886 1.2e-94 350.5 281 65.8
CsaV3_1G041470 Cucumis sativus L. HOM05D006517 ORTHO05D007886 6.2e-94 348.2 283 62.2
Phvul.003G125800 Phaseolus vulgaris HOM05D006517 ORTHO05D007886 1.8e-93 346.7 280 65.7
CAN.G55.2 Capsicum annuum HOM05D006517 ORTHO05D007886 1.5e-92 343.6 290 63.4
THA.LOC104804445 Tarenaya hassleriana HOM05D006517 ORTHO05D007886 2.0e-92 343.2 283 60.1
Sed0014627 Sechium edule HOM05D006517 ORTHO05D007886 9.8e-92 340.9 282 62.4
unitig_26.g9120 Utricularia gibba HOM05D006517 ORTHO05D007886 2.9e-91 339.3 291 60.1
Potri.006G217100 Populus trichocarpa HOM05D006517 ORTHO05D007886 3.7e-91 339.0 287 60.3
HanXRQChr09g0258421 Helianthus annuus HOM05D006517 ORTHO05D007886 2.0e-89 333.2 283 61.5
Ciclev10009053m.g Citrus clementina HOM05D006517 ORTHO05D007886 4.6e-89 332.0 288 58.3
Sc18g0002960 Simmondsia chinensis HOM05D006517 ORTHO05D007886 4.6e-89 332.0 288 61.5
MELO3C015558.2 Cucumis melo HOM05D006517 ORTHO05D007886 6.0e-89 331.6 284 60.9
Nitab4.5_0005239g0010 Nicotiana tabacum HOM05D006517 ORTHO05D007886 1.0e-88 330.9 283 62.2
Oeu000950.1 Olea europaea HOM05D006517 ORTHO05D007886 2.3e-88 329.7 251 66.1
MD15G1225700 Malus domestica HOM05D006517 ORTHO05D007886 9.5e-87 324.3 282 59.6
Duzib187G0844 Durio zibethinus HOM05D006517 ORTHO05D007886 2.8e-86 322.8 286 61.2
FAN23G1398 Fragaria x ananassa HOM05D006517 ORTHO05D007886 8.1e-86 321.2 283 59.0
EL10Ac8g18944 Beta vulgaris HOM05D006517 ORTHO05D007886 1.2e-84 317.4 283 58.3
PSO541G2149 Papaver somniferum HOM05D006517 ORTHO05D007886 3.4e-84 315.8 283 57.6
PSO675G5415 Papaver somniferum HOM05D006517 ORTHO05D007886 3.7e-83 312.4 283 56.9
MBI13_g05966_MAGBIO Magnolia biondii HOM05D006517 ORTHO05D007886 1.9e-82 310.1 290 58.3
AUR62025324 Chenopodium quinoa HOM05D006517 ORTHO05D007886 9.2e-82 307.8 282 56.4
ATR0006G021 Amborella trichopoda HOM05D006517 ORTHO05D007886 1.2e-81 307.4 290 56.2
arahy.Tifrunner.gnm1.ann1.2S6U7G Arachis hypogaea HOM05D006517 ORTHO05D007886 1.2e-81 307.4 263 61.6
CANSAT56G3804 Cannabis sativa HOM05D006517 ORTHO05D007886 1.6e-81 307.0 286 57.3
Hund08920 Selenicereus undatus HOM05D006517 ORTHO05D007886 1.0e-80 304.3 284 56.3
CANSAT56G0784 Cannabis sativa HOM05D006517 ORTHO05D007886 1.3e-80 303.9 286 56.6
ECA232G0292 Erigeron canadensis HOM05D001622 ORTHO05D002989 1.7e-80 303.5 264 61.7
CDE05G1274 Ceratophyllum demersum HOM05D006517 ORTHO05D007886 2.3e-80 303.1 287 55.7
Sabra06G0167400 Salix brachista HOM05D006517 ORTHO05D007886 2.3e-80 303.1 328 52.1
SGA_v2.0_scaffold318G48507 Striga asiatica HOM05D006517 ORTHO05D007886 3.0e-80 302.8 305 51.8
FvH4_1g09680 Fragaria vesca HOM05D006517 ORTHO05D007886 1.9e-79 300.1 283 56.5
FAN26G1998 Fragaria x ananassa HOM05D006517 ORTHO05D007886 1.9e-79 300.1 283 56.5
Psat4g020160 Pisum sativum HOM05D006517 ORTHO05D007886 3.3e-79 299.3 238 66.4
MD02G1105800 Malus domestica HOM05D006517 ORTHO05D007886 1.4e-77 293.9 283 55.8
Zm00001eb327610 Zea mays HOM05D006517 ORTHO05D007886 5.2e-77 292.0 279 52.3
Haze_03605 Corylus avellana HOM05D006517 ORTHO05D007886 2.2e-75 286.6 253 60.9
Rhsim05G0081000 Rhododendron simsii HOM05D006517 ORTHO05D007886 4.9e-75 285.4 273 60.8
Aqoxy7G00916 Aquilegia oxysepala HOM05D006517 ORTHO05D007886 8.4e-75 284.6 287 53.7
SalBow6G1494 Salvia bowleyana HOM05D006517 ORTHO05D007886 3.0e-72 276.2 256 58.2
arahy.Tifrunner.gnm1.ann1.0410DC Arachis hypogaea HOM05D006517 ORTHO05D007886 2.5e-71 273.1 242 60.7
SGA_v2.0_scaffold31G12706 Striga asiatica HOM05D006517 ORTHO05D007886 1.6e-70 270.4 246 58.5
VMungo1215G1783 Vigna mungo HOM05D006517 ORTHO05D007886 2.1e-70 270.0 280 54.6
FAN26G3113 Fragaria x ananassa HOM05D006517 ORTHO05D007886 4.4e-68 262.3 283 51.9
AUR62028338 Chenopodium quinoa HOM05D000417 ORTHO05D007886 4.9e-67 258.8 277 51.3
Nn8g38504 Nelumbo nucifera HOM05D006517 ORTHO05D007886 5.6e-63 245.4 283 47.7
FAN28G2617 Fragaria x ananassa HOM05D006517 ORTHO05D007886 9.6e-63 244.6 283 50.2
Os07g0618600 Oryza sativa ssp. japonica HOM05D006517 ORTHO05D007886 6.2e-62 241.9 290 46.9
DCAR_010521 Daucus carota HOM05D006517 ORTHO05D007886 4.0e-61 239.2 298 50.3
SMO117G0175 Selaginella moellendorffii HOM05D006517 ORTHO05D007886 1.2e-60 237.7 312 46.5
FAN23G2301 Fragaria x ananassa HOM05D006517 ORTHO05D007886 3.4e-60 236.1 283 48.8
Mapoly0086s0040 Marchantia polymorpha HOM05D006517 ORTHO05D007886 2.7e-57 226.5 287 44.9
HPP92_002174 Vanilla planifolia HOM05D000872 ORTHO05D007886 2.4e-53 213.4 241 49.8
Aa31LG5G9580 Aethionema arabicum HOM05D006517 ORTHO05D007886 1.3e-48 197.6 210 52.9
Solyc06g031680.2 Solanum lycopersicum HOM05D006517 ORTHO05D007886 1.8e-48 197.2 176 58.5
Cc09_g04390 Coffea canephora HOM05D006517 ORTHO05D007886 2.3e-48 196.8 141 62.4
Ah.09g228830 Amaranthus hybridus HOM05D006517 ORTHO05D007886 6.7e-48 195.3 211 51.7
Sp4g06310 Schrenkiella parvula HOM05D006517 ORTHO05D007886 9.6e-47 191.4 202 55.0
HPP92_002241 Vanilla planifolia HOM05D000872 ORTHO05D000777 1.8e-45 187.2 245 46.1
C04p55990 Brassica napus HOM05D006517 ORTHO05D007886 5.3e-45 185.7 170 60.0
BolC4t27132H Brassica oleracea HOM05D006517 ORTHO05D007886 5.3e-45 185.7 170 60.0
CARHR115040 Cardamine hirsuta HOM05D006517 ORTHO05D007886 2.6e-44 183.3 202 53.5
BraA04t17607Z Brassica rapa HOM05D006517 ORTHO05D007886 7.6e-44 181.8 170 58.2
Sopen06g010170 Solanum pennellii HOM05D006517 ORTHO05D007886 7.6e-44 181.8 128 66.4
A04p20280 Brassica napus HOM05D006517 ORTHO05D007886 1.0e-43 181.4 170 58.2
AT2G26210 Arabidopsis thaliana HOM05D006517 ORTHO05D007886 1.9e-42 177.2 203 51.2
AL4G18760 Arabidopsis lyrata HOM05D006517 ORTHO05D007886 1.2e-41 174.5 203 51.2
Pp3c18_11010 Physcomitrium patens HOM05D006517 ORTHO05D007886 2.1e-41 173.7 284 36.3
Carub.0004s0605 Capsella rubella HOM05D006517 ORTHO05D007886 4.6e-41 172.6 170 54.7
Cpa.g.sc82.30 Carica papaya HOM05D006517 ORTHO05D007886 1.0e-40 171.4 111 74.8
CBR_g36802 Chara braunii HOM05D006517 ORTHO05D007886 1.3e-40 171.0 292 37.7
Cc09_g04380 Coffea canephora HOM05D006517 ORTHO05D007886 1.8e-40 170.6 137 63.5
vmacro13145 Vaccinium macrocarpon HOM05D006517 ORTHO05D007886 3.9e-40 169.5 214 50.5
AagrBONN_evm.TU.Sc2ySwM_362.2898 Anthoceros agrestis HOM05D006517 ORTHO05D007886 1.2e-36 157.9 230 40.9
BcaNung07167 Brassica carinata HOM05D006517 ORTHO05D007886 4.2e-34 149.4 170 51.8
Solyc06g031690.4 Solanum lycopersicum HOM05D006517 ORTHO05D007886 5.5e-34 149.1 99 76.8
FAN19G3155 Fragaria x ananassa HOM05D006517 ORTHO05D007886 7.2e-34 148.7 212 44.3
SEGI_24061 Sequoiadendron giganteum HOM05D006517 ORTHO05D007886 2.3e-32 143.7 190 44.7
Thhalv10002200m.g Eutrema salsugineum HOM05D006517 ORTHO05D007886 8.2e-30 135.2 206 45.6
Cpa.g.sc82.25 Carica papaya HOM05D006517 ORTHO05D007886 6.9e-29 132.1 68 83.8
Peaxi162Scf00658g00031 Petunia axillaris HOM05D000115 ORTHO05D000464 7.9e-25 118.6 167 44.9
Lsat_1_v5_gn_5_30201 Lactuca sativa HOM05D006517 ORTHO05D007886 3.6e-17 93.2 98 54.1
Medtr5g081760 Medicago truncatula HOM05D006517 ORTHO05D007886 1.2e-12 78.2 81 50.6
Medtr4g036440 Medicago truncatula HOM05D006517 ORTHO05D007886 3.8e-11 73.2 75 50.7
Medtr8g098885 Medicago truncatula HOM05D006517 ORTHO05D007886 5.5e-10 69.3 49 63.3
PGSC0003DMG400015096 Solanum tuberosum HOM05D006517 ORTHO05D007886 4.4e-07 59.7 55 50.9
TWI73G0176 Tripterygium wilfordii HOM05D000088 ORTHO05D003056 4.4e-07 59.7 100 34.0
Cpa.g.sc82.29 Carica papaya HOM05D006517 ORTHO05D007886 2.8e-06 57.0 62 51.6
Psat1g193640 Pisum sativum HOM05D000088 ORTHO05D003056 2.8e-06 57.0 122 31.1
Ca_00492_v3 Cicer arietinum L. HOM05D000088 ORTHO05D003056 3.7e-06 56.6 135 30.4
Thecc.06G161000 Theobroma cacao HOM05D000088 ORTHO05D003056 6.3e-06 55.8 106 30.2


User provided reference genes

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