Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0016507 Camellia sinensis var. sinensis HOM05D008183 ORTHO05D007254 4.4e-71 271.2 136 100.0
CSS0012014 Camellia sinensis var. sinensis HOM05D008183 ORTHO05D007254 5.8e-39 164.5 152 55.9
CSS0013917 Camellia sinensis var. sinensis HOM05D008183 ORTHO05D007254 6.4e-38 161.0 152 55.9
CSS0023048 Camellia sinensis var. sinensis HOM05D008183 ORTHO05D007254 1.9e-37 159.5 138 60.1
CSS0007562 Camellia sinensis var. sinensis HOM05D008183 ORTHO05D007254 7.1e-37 157.5 145 57.9
CSS0000077 Camellia sinensis var. sinensis HOM05D008183 ORTHO05D007254 1.6e-36 156.4 140 56.4
CSS0048373 Camellia sinensis var. sinensis HOM05D008183 ORTHO05D007254 2.2e-30 136.0 160 48.8
CSS0039886 Camellia sinensis var. sinensis HOM05D008183 ORTHO05D007254 1.2e-23 113.6 147 41.5
CSS0022949 Camellia sinensis var. sinensis HOM05D008183 ORTHO05D007254 1.0e-22 110.5 136 47.1
CSS0048899 Camellia sinensis var. sinensis HOM05D008183 ORTHO05D007254 4.6e-20 101.7 131 40.5
CSS0027326 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 7.9e-20 100.9 136 40.4
CSS0008839 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 1.3e-17 93.6 154 35.1
Rhsim01G0155500 Rhododendron simsii HOM05D000003 ORTHO05D007254 1.3e-17 93.6 148 39.9
Rhsim06G0103400 Rhododendron simsii HOM05D000003 ORTHO05D000004 1.3e-17 93.6 148 39.9
Rhsim13G0004500 Rhododendron simsii HOM05D008183 ORTHO05D007254 1.7e-17 93.2 148 39.2
CSS0034453 Camellia sinensis var. sinensis HOM05D008183 ORTHO05D007254 2.4e-16 89.4 130 36.9
Rhsim03G0084200 Rhododendron simsii HOM05D008183 ORTHO05D007254 4.1e-16 88.6 148 37.8
CSS0036610 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D007254 2.0e-15 86.3 145 37.9
Rhsim11G0009800 Rhododendron simsii HOM05D000003 ORTHO05D000004 2.6e-15 85.9 150 36.0
Rhsim07G0138700 Rhododendron simsii HOM05D000003 ORTHO05D000004 5.9e-15 84.7 145 34.5
vmacro21152 Vaccinium macrocarpon HOM05D003664 ORTHO05D003077 5.9e-15 84.7 137 32.8
CSS0001686 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 7.7e-15 84.3 89 44.9
vmacro23070 Vaccinium macrocarpon HOM05D000626 ORTHO05D007254 1.0e-14 84.0 118 38.1
CSS0000654 Camellia sinensis var. sinensis HOM05D008183 ORTHO05D007254 3.8e-14 82.0 148 36.5
CSS0037115 Camellia sinensis var. sinensis HOM05D008183 ORTHO05D007254 3.8e-14 82.0 122 41.0
CSS0024246 Camellia sinensis var. sinensis HOM05D008183 ORTHO05D007254 6.5e-14 81.3 147 34.7
Rhsim04G0100600 Rhododendron simsii HOM05D000003 ORTHO05D000004 8.5e-14 80.9 121 40.5
Rhsim08G0082000 Rhododendron simsii HOM05D000003 ORTHO05D000006 1.4e-13 80.1 148 33.8
CSS0013490 Camellia sinensis var. sinensis HOM05D008183 ORTHO05D007254 4.2e-13 78.6 147 35.4
vmacro20413 Vaccinium macrocarpon HOM05D000009 ORTHO05D000008 4.2e-13 78.6 146 34.2
Rhsim03G0019700 Rhododendron simsii HOM05D008183 ORTHO05D007254 2.1e-12 76.3 148 33.1
Rhsim03G0019800 Rhododendron simsii HOM05D008183 ORTHO05D007254 2.1e-12 76.3 148 33.1
Rhsim02G0203700 Rhododendron simsii HOM05D000001 ORTHO05D009494 2.7e-12 75.9 120 40.8
RhsimUnG0047500 Rhododendron simsii HOM05D008183 ORTHO05D007254 3.6e-12 75.5 145 33.1
CSS0043494 Camellia sinensis var. sinensis HOM05D008183 ORTHO05D007254 6.1e-12 74.7 130 34.6
Rhsim01G0063000 Rhododendron simsii HOM05D008183 ORTHO05D007254 6.1e-12 74.7 145 35.2
Rhsim03G0134300 Rhododendron simsii HOM05D008183 ORTHO05D007254 7.9e-12 74.3 133 33.8
CSS0027596 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 3.9e-11 72.0 87 40.2
vmacro20957 Vaccinium macrocarpon HOM05D003698 ORTHO05D004320 6.7e-11 71.2 149 32.2
CSS0041363 Camellia sinensis var. sinensis HOM05D001340 ORTHO05D002318 1.5e-10 70.1 112 37.5
Rhsim01G0167200 Rhododendron simsii HOM05D000003 ORTHO05D007254 2.0e-10 69.7 153 34.6
Lj1P1217T36 Lonicera japonica HOM05D008183 ORTHO05D007254 7.4e-10 67.8 140 32.9
Rhsim01G0165600 Rhododendron simsii HOM05D000003 ORTHO05D007254 1.3e-09 67.0 153 35.3
vmacro06655 Vaccinium macrocarpon HOM05D003626 ORTHO05D004255 1.3e-09 67.0 86 44.2
PSO532G0007 Papaver somniferum HOM05D003407 ORTHO05D001026 1.7e-09 66.6 151 30.5
Rhsim03G0017000 Rhododendron simsii HOM05D008183 ORTHO05D007254 1.7e-09 66.6 88 44.3
CSS0035533 Camellia sinensis var. sinensis HOM05D008183 ORTHO05D007254 8.2e-09 64.3 86 39.5
Lj2C40G9 Lonicera japonica HOM05D008183 ORTHO05D007254 8.2e-09 64.3 148 29.7
Rhsim03G0007600 Rhododendron simsii HOM05D033359 ORTHO05D007254 8.2e-09 64.3 129 28.7
Rhsim01G0064200 Rhododendron simsii HOM05D008183 ORTHO05D007254 1.4e-08 63.5 148 32.4
CSS0034752 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D007254 5.3e-08 61.6 132 33.3
COL.COLO4_28797 Corchorus olitorius HOM05D000003 ORTHO05D000004 7.0e-08 61.2 146 30.8
Rhsim01G0039500 Rhododendron simsii HOM05D000003 ORTHO05D007254 1.2e-07 60.5 137 31.4
Lj5g0017569 Lotus japonicus HOM05D000003 ORTHO05D007254 1.5e-07 60.1 150 28.0
CSS0019282 Camellia sinensis var. sinensis HOM05D008183 ORTHO05D007254 2.0e-07 59.7 97 34.0
Gorai.004G068400 Gossypium raimondii HOM05D008183 ORTHO05D007254 3.4e-07 58.9 138 31.2
CSS0013596 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D007254 7.7e-07 57.8 43 62.8
Lj5g0011892 Lotus japonicus HOM05D000003 ORTHO05D007254 7.7e-07 57.8 151 26.5
Lj3g0000535 Lotus japonicus HOM05D000003 ORTHO05D007254 1.3e-06 57.0 151 28.5
vmacro10934 Vaccinium macrocarpon HOM05D001953 ORTHO05D001904 1.3e-06 57.0 104 35.6
vmacro19083 Vaccinium macrocarpon HOM05D000458 ORTHO05D000951 2.2e-06 56.2 118 31.4
Rhsim12G0201300 Rhododendron simsii HOM05D002908 ORTHO05D009379 2.9e-06 55.8 71 46.5
CSS0006002 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 3.8e-06 55.5 76 36.8
Lj3P1014T21 Lonicera japonica HOM05D008183 ORTHO05D007254 3.8e-06 55.5 128 28.1
COL.COLO4_30449 Corchorus olitorius HOM05D001332 ORTHO05D007191 5.0e-06 55.1 147 27.9
Lj3C625T2 Lonicera japonica HOM05D008183 ORTHO05D007254 6.5e-06 54.7 82 39.0
Prupe.1G073500 Prunus persica HOM05D008133 ORTHO05D007254 6.5e-06 54.7 121 29.8
CSS0040440 Camellia sinensis var. sinensis HOM05D021266 ORTHO05D007254 8.5e-06 54.3 98 31.6
vmacro01918 Vaccinium macrocarpon HOM05D008183 ORTHO05D007254 8.5e-06 54.3 73 39.7


User provided reference genes

Program Settings