Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0016505 Camellia sinensis var. sinensis HOM05D006087 ORTHO05D007479 9.8e-39 163.3 103 100.0
CSS0027394 Camellia sinensis var. sinensis HOM05D006087 ORTHO05D007479 9.8e-39 163.3 103 100.0
Hma1.2p1_0065F.1_g035460 Hydrangea macrophylla HOM05D006087 ORTHO05D007479 6.8e-32 140.6 85 90.6
Sc04g0010140 Simmondsia chinensis HOM05D006087 ORTHO05D007479 2.2e-30 135.6 85 84.7
CiPaw.05G109600 Carya illinoinensis HOM05D006087 ORTHO05D007479 4.9e-30 134.4 85 78.8
Eucgr.B03495 Eucalyptus grandis HOM05D006087 ORTHO05D007479 6.4e-30 134.0 85 82.4
Actinidia20712 Actinidia chinensis HOM05D006087 ORTHO05D007479 1.4e-29 132.9 85 77.6
Rhsim12G0025700 Rhododendron simsii HOM05D006087 ORTHO05D007479 2.4e-29 132.1 85 84.7
Solyc05g015470.1 Solanum lycopersicum HOM05D006087 ORTHO05D007479 4.1e-29 131.3 85 80.0
Sopen05g010780 Solanum pennellii HOM05D006087 ORTHO05D007479 4.1e-29 131.3 85 80.0
Cc11_g16920 Coffea canephora HOM05D006087 ORTHO05D007479 9.2e-29 130.2 85 74.1
THA.LOC104812595 Tarenaya hassleriana HOM05D006087 ORTHO05D007479 9.2e-29 130.2 85 75.3
Oeu036868.1 Olea europaea HOM05D006087 ORTHO05D007479 1.2e-28 129.8 84 76.2
SGA_v2.0_scaffold9G04680 Striga asiatica HOM05D006087 ORTHO05D007479 1.2e-28 129.8 87 73.6
CANSAT01G2640 Cannabis sativa HOM05D006087 ORTHO05D007479 1.6e-28 129.4 85 81.2
Lalb_Chr12g0206161 Lupinus albus HOM05D006087 ORTHO05D007479 1.6e-28 129.4 85 76.5
Manes.12G011100 Manihot esculenta HOM05D006087 ORTHO05D007479 2.7e-28 128.6 85 81.2
TWI75G0102 Tripterygium wilfordii HOM05D006087 ORTHO05D007479 4.6e-28 127.9 84 77.4
QL03p052667 Quercus lobata HOM05D006087 ORTHO05D007479 6.0e-28 127.5 85 83.5
Ciclev10033174m.g Citrus clementina HOM05D006087 ORTHO05D007479 7.8e-28 127.1 85 76.5
PGSC0003DMG400014051 Solanum tuberosum HOM05D006087 ORTHO05D007479 7.8e-28 127.1 85 78.8
Migut.K00735 Erythranthe guttata HOM05D006087 ORTHO05D007479 2.3e-27 125.6 85 78.8
Potri.003G171800 Populus trichocarpa HOM05D006087 ORTHO05D007479 5.1e-27 124.4 85 84.7
MELO3C011864.2 Cucumis melo HOM05D006087 ORTHO05D007479 6.6e-27 124.0 85 72.9
Duzib251G0251 Durio zibethinus HOM05D006087 ORTHO05D007479 6.6e-27 124.0 85 78.8
Gohir.D12G152800 Gossypium hirsutum HOM05D006087 ORTHO05D007479 6.6e-27 124.0 85 71.8
Gorai.008G165300 Gossypium raimondii HOM05D006087 ORTHO05D007479 6.6e-27 124.0 85 71.8
Lsat_1_v5_gn_4_3481 Lactuca sativa HOM05D006087 ORTHO05D007479 6.6e-27 124.0 89 73.0
TWI18G0911 Tripterygium wilfordii HOM05D006087 ORTHO05D007479 6.6e-27 124.0 84 75.0
Oeu004448.1 Olea europaea HOM05D006087 ORTHO05D007479 8.6e-27 123.6 84 77.4
Thecc.02G208200 Theobroma cacao HOM05D006087 ORTHO05D007479 8.6e-27 123.6 85 77.6
TAR374G1631 Trochodendron aralioides HOM05D006087 ORTHO05D007479 8.6e-27 123.6 85 72.9
unitig_749.g13305 Utricularia gibba HOM05D006087 ORTHO05D007479 8.6e-27 123.6 85 69.4
COL.COLO4_20404 Corchorus olitorius HOM05D006087 ORTHO05D007479 1.1e-26 123.2 85 77.6
TWI36G1569 Tripterygium wilfordii HOM05D006087 ORTHO05D007479 1.1e-26 123.2 84 73.8
Atru.chr11.2326 Acer truncatum HOM05D006087 ORTHO05D007479 1.5e-26 122.9 85 71.8
CsaV3_5G030260 Cucumis sativus L. HOM05D006087 ORTHO05D007479 1.9e-26 122.5 85 72.9
Potri.001G056601 Populus trichocarpa HOM05D006087 ORTHO05D007479 1.9e-26 122.5 85 75.3
TAR622G0081 Trochodendron aralioides HOM05D006087 ORTHO05D007479 1.9e-26 122.5 84 73.8
A06p47950 Brassica napus HOM05D006087 ORTHO05D007479 2.5e-26 122.1 85 70.6
C07p25860 Brassica napus HOM05D006087 ORTHO05D007479 2.5e-26 122.1 85 70.6
BolC7t43103H Brassica oleracea HOM05D006087 ORTHO05D007479 2.5e-26 122.1 85 70.6
BraA06t27665Z Brassica rapa HOM05D006087 ORTHO05D007479 2.5e-26 122.1 85 70.6
FAN07G1634 Fragaria x ananassa HOM05D006087 ORTHO05D007479 2.5e-26 122.1 84 72.6
FAN17G2012 Fragaria x ananassa HOM05D006087 ORTHO05D007479 2.5e-26 122.1 84 72.6
FAN22G0702 Fragaria x ananassa HOM05D006087 ORTHO05D007479 2.5e-26 122.1 84 72.6
Phvul.001G262000 Phaseolus vulgaris HOM05D006087 ORTHO05D007479 3.3e-26 121.7 85 72.9
RcHm_v2.0_Chr4g0430231 Rosa chinensis HOM05D006087 ORTHO05D007479 3.3e-26 121.7 84 72.6
Sp2g08050 Schrenkiella parvula HOM05D006087 ORTHO05D007479 3.3e-26 121.7 85 69.4
Ah.03g136140 Amaranthus hybridus HOM05D006087 ORTHO05D007479 4.3e-26 121.3 85 69.4
AL8G17230 Arabidopsis lyrata HOM05D006087 ORTHO05D007479 4.3e-26 121.3 85 68.2
EL10Ac6g13503 Beta vulgaris HOM05D006087 ORTHO05D007479 4.3e-26 121.3 85 71.8
ECA234G0111 Erigeron canadensis HOM05D006087 ORTHO05D007479 4.3e-26 121.3 81 71.6
Glyma.18G006400 Glycine max HOM05D006087 ORTHO05D007479 5.6e-26 120.9 85 74.1
Gohir.A12G148826 Gossypium hirsutum HOM05D006087 ORTHO05D007479 5.6e-26 120.9 85 74.1
MD16G1119600 Malus domestica HOM05D006087 ORTHO05D007479 5.6e-26 120.9 84 69.0
FAN12G1341 Fragaria x ananassa HOM05D006087 ORTHO05D007479 7.3e-26 120.6 84 71.4
FAN12G1854 Fragaria x ananassa HOM05D006087 ORTHO05D007479 7.3e-26 120.6 84 71.4
Gohir.D04G182800 Gossypium hirsutum HOM05D006087 ORTHO05D007479 7.3e-26 120.6 85 74.1
Gorai.012G175800 Gossypium raimondii HOM05D006087 ORTHO05D007479 7.3e-26 120.6 85 74.1
THA.LOC104820522 Tarenaya hassleriana HOM05D006087 ORTHO05D007479 7.3e-26 120.6 85 81.2
Aa31LG9G13330 Aethionema arabicum HOM05D006087 ORTHO05D007479 1.2e-25 119.8 85 71.8
Glyma.11G250700 Glycine max HOM05D006087 ORTHO05D007479 1.2e-25 119.8 85 72.9
CAN.G163.9 Capsicum annuum HOM05D006087 ORTHO05D007479 2.8e-25 118.6 87 72.4
BcaC04g21941 Brassica carinata HOM05D006087 ORTHO05D007479 3.6e-25 118.2 85 67.1
C09p25630 Brassica napus HOM05D006087 ORTHO05D007479 3.6e-25 118.2 85 67.1
BolC9t55466H Brassica oleracea HOM05D006087 ORTHO05D007479 3.6e-25 118.2 85 67.1
Duzib248G0070 Durio zibethinus HOM05D006087 ORTHO05D007479 3.6e-25 118.2 85 69.4
Gohir.A04G139600 Gossypium hirsutum HOM05D006087 ORTHO05D007479 3.6e-25 118.2 85 74.1
MD13G1119200 Malus domestica HOM05D006087 ORTHO05D007479 3.6e-25 118.2 84 70.2
AT5G43260 Arabidopsis thaliana HOM05D006087 ORTHO05D007479 4.7e-25 117.9 85 67.1
BraA09t37633Z Brassica rapa HOM05D006087 ORTHO05D007479 4.7e-25 117.9 85 67.1
Carub.0008s0544 Capsella rubella HOM05D006087 ORTHO05D007479 6.2e-25 117.5 85 67.1
Cpa.g.sc43.59 Carica papaya HOM05D006087 ORTHO05D007479 6.2e-25 117.5 85 82.4
HanXRQChr10g0310621 Helianthus annuus HOM05D006087 ORTHO05D007479 6.2e-25 117.5 85 69.4
A09p20220 Brassica napus HOM05D006087 ORTHO05D007479 8.1e-25 117.1 85 67.1
MSTRG.8005 Avicennia marina HOM05D006087 ORTHO05D007479 1.1e-24 116.7 85 77.6
CARHR180610 Cardamine hirsuta HOM05D006087 ORTHO05D007479 1.4e-24 116.3 85 71.8
AUR62005621 Chenopodium quinoa HOM05D006087 ORTHO05D007479 1.4e-24 116.3 86 77.9
Ah.02g130900 Amaranthus hybridus HOM05D006087 ORTHO05D007479 1.8e-24 115.9 85 65.9
Cfa009371 Carpinus fangiana HOM05D006087 ORTHO05D007479 1.8e-24 115.9 85 74.1
Haze_12421 Corylus avellana HOM05D006087 ORTHO05D007479 1.8e-24 115.9 85 74.1
Lj4g0011842 Lotus japonicus HOM05D006087 ORTHO05D007479 2.4e-24 115.5 86 70.9
ATR0561G204 Amborella trichopoda HOM05D006087 ORTHO05D007479 4.0e-24 114.8 85 75.3
BcaB07g31021 Brassica carinata HOM05D006087 ORTHO05D007479 4.0e-24 114.8 85 64.7
CiPaw.06G102800 Carya illinoinensis HOM05D006087 ORTHO05D007479 4.0e-24 114.8 85 71.8
AUR62028927 Chenopodium quinoa HOM05D006087 ORTHO05D007479 5.2e-24 114.4 86 79.1
Duzib268G0474 Durio zibethinus HOM05D006087 ORTHO05D007479 1.2e-23 113.2 84 73.8
THA.LOC104825505 Tarenaya hassleriana HOM05D006087 ORTHO05D007479 1.5e-23 112.8 87 70.1
Prupe.1G225600 Prunus persica HOM05D006087 ORTHO05D007479 2.6e-23 112.1 84 69.0
Aqoxy5G03370 Aquilegia oxysepala HOM05D006087 ORTHO05D007479 3.4e-23 111.7 82 74.4
arahy.Tifrunner.gnm1.ann1.1Z01XL Arachis hypogaea HOM05D006087 ORTHO05D007479 3.4e-23 111.7 87 73.6
Nitab4.5_0001808g0020 Nicotiana tabacum HOM05D006087 ORTHO05D007479 3.4e-23 111.7 85 70.6
TPR.G17782 Trifolium pratense HOM05D006087 ORTHO05D007479 3.4e-23 111.7 85 70.6
Medtr3g085300 Medicago truncatula HOM05D006087 ORTHO05D007479 5.8e-23 110.9 85 68.2
Psat5g096360 Pisum sativum HOM05D006087 ORTHO05D007479 5.8e-23 110.9 85 70.6
Ca_16458_v3 Cicer arietinum L. HOM05D006087 ORTHO05D007479 9.9e-23 110.2 85 70.6
THA.LOC104807129 Tarenaya hassleriana HOM05D006087 ORTHO05D007479 9.9e-23 110.2 88 68.2
Migut.E00016 Erythranthe guttata HOM05D006087 ORTHO05D007479 1.7e-22 109.4 85 70.6
Nitab4.5_0000039g0180 Nicotiana tabacum HOM05D006087 ORTHO05D007479 1.7e-22 109.4 85 69.4
CDE02G3899 Ceratophyllum demersum HOM05D006087 ORTHO05D007479 2.2e-22 109.0 85 62.4
PGR102G3303 Punica granatum HOM05D006087 ORTHO05D007479 2.2e-22 109.0 85 78.8
PSO017G6027 Papaver somniferum HOM05D006087 ORTHO05D007479 3.8e-22 108.2 85 65.9
PSO478G2574 Papaver somniferum HOM05D006087 ORTHO05D007479 3.8e-22 108.2 85 65.9
Sed0007875 Sechium edule HOM05D006087 ORTHO05D007479 1.9e-21 105.9 85 68.2
MBI11_g44422_MAGBIO Magnolia biondii HOM05D006087 ORTHO05D007479 4.2e-21 104.8 86 75.6
MD05G1114700 Malus domestica HOM05D006087 ORTHO05D007479 1.6e-20 102.8 81 64.2
MELO3C010741.2 Cucumis melo HOM05D006087 ORTHO05D007479 3.5e-20 101.7 86 62.8
Lalb_Chr23g0278081 Lupinus albus HOM05D006087 ORTHO05D007479 4.6e-20 101.3 85 71.8
ECA233G2512 Erigeron canadensis HOM05D006443 ORTHO05D007797 3.0e-19 98.6 70 68.6
ClCG08G017160 Citrullus lanatus HOM05D006087 ORTHO05D007479 5.1e-19 97.8 85 69.4
MBI11_g05327_MAGBIO Magnolia biondii HOM05D006087 ORTHO05D007479 1.5e-18 96.3 66 75.8
CsaV3_2G025430 Cucumis sativus L. HOM05D006087 ORTHO05D007479 2.8e-17 92.0 80 65.0
Mapoly0062s0032 Marchantia polymorpha HOM05D006087 ORTHO05D007479 3.6e-17 91.7 85 55.3
Pp3c21_520 Physcomitrium patens HOM05D006087 ORTHO05D007479 9.0e-16 87.0 89 50.6
Pp3c18_21810 Physcomitrium patens HOM05D006087 ORTHO05D007479 1.5e-15 86.3 88 51.1
Pp3c22_5660 Physcomitrium patens HOM05D006087 ORTHO05D007479 9.9e-15 83.6 88 48.9
Pp3c14_11460 Physcomitrium patens HOM05D006087 ORTHO05D007479 7.1e-13 77.4 88 47.7
HPP92_024307 Vanilla planifolia HOM05D006087 ORTHO05D007479 9.3e-13 77.0 81 53.1
HPP92_024290 Vanilla planifolia HOM05D006087 ORTHO05D007479 2.1e-12 75.9 82 53.7
Hma1.2p1_0349F.1_g132260 Hydrangea macrophylla HOM05D006087 ORTHO05D007479 5.1e-11 71.2 85 54.1
Pp3c17_7480 Physcomitrium patens HOM05D006087 ORTHO05D007479 5.1e-11 71.2 85 42.4
Os02g0506600 Oryza sativa ssp. japonica HOM05D006087 ORTHO05D007479 1.1e-10 70.1 92 50.0
Zm00001eb241730 Zea mays HOM05D006087 ORTHO05D007479 9.6e-10 67.0 87 49.4
Zm00001eb180950 Zea mays HOM05D006087 ORTHO05D007479 3.6e-09 65.1 87 50.6
Oeu016235.1 Olea europaea HOM05D006087 ORTHO05D007479 5.3e-08 61.2 52 63.5
Cre10.g432100 Chlamydomonas reinhardtii HOM05D006087 ORTHO05D007479 3.4e-07 58.5 85 37.6
Zm00001eb421040 Zea mays HOM05D006087 ORTHO05D007479 3.8e-06 55.1 73 46.6
CDE05G3495 Ceratophyllum demersum HOM05D006087 ORTHO05D007479 8.4e-06 53.9 58 53.4


User provided reference genes

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