Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0016502 Camellia sinensis var. sinensis HOM05D063851 ORTHO05D109756 1.2e-47 193.0 109 100.0
CSS0031110 Camellia sinensis var. sinensis HOM05D063851 ORTHO05D113497 1.8e-30 136.0 120 76.7
CSS0035794 Camellia sinensis var. sinensis HOM05D000064 ORTHO05D001307 3.6e-07 58.5 35 88.6
Cpa.g.sc85.114 Carica papaya HOM05D000064 ORTHO05D001307 3.1e-06 55.5 34 82.4
Nn7g36095 Nelumbo nucifera HOM05D000064 ORTHO05D001307 3.1e-06 55.5 34 79.4
BcaC05g29276 Brassica carinata HOM05D000064 ORTHO05D001307 5.2e-06 54.7 34 79.4
A05p37140 Brassica napus HOM05D000064 ORTHO05D001307 5.2e-06 54.7 34 79.4
C05p55570 Brassica napus HOM05D000064 ORTHO05D001307 5.2e-06 54.7 34 79.4
BolC5t34226H Brassica oleracea HOM05D000064 ORTHO05D001307 5.2e-06 54.7 34 79.4
BraA05t22512Z Brassica rapa HOM05D000064 ORTHO05D001307 5.2e-06 54.7 34 79.4
CARHR086740 Cardamine hirsuta HOM05D000064 ORTHO05D001307 5.2e-06 54.7 34 79.4
Lj7A568G79 Lonicera japonica HOM05D000064 ORTHO05D001307 5.2e-06 54.7 35 80.0
Nn2g15510 Nelumbo nucifera HOM05D000064 ORTHO05D001307 5.2e-06 54.7 35 77.1
ATR0605G242 Amborella trichopoda HOM05D000064 ORTHO05D001307 6.8e-06 54.3 35 80.0
CiPaw.05G033100 Carya illinoinensis HOM05D000064 ORTHO05D001307 6.8e-06 54.3 35 77.1
CiPaw.13G002600 Carya illinoinensis HOM05D000064 ORTHO05D001307 6.8e-06 54.3 35 77.1
Eucgr.A02418 Eucalyptus grandis HOM05D000064 ORTHO05D001307 6.8e-06 54.3 34 82.4
PGR004G0435 Punica granatum HOM05D000064 ORTHO05D001307 6.8e-06 54.3 34 82.4
QL04p005165 Quercus lobata HOM05D000064 ORTHO05D001307 6.8e-06 54.3 35 77.1
AagrBONN_evm.TU.Sc2ySwM_344.2055 Anthoceros agrestis HOM05D000064 ORTHO05D001307 8.9e-06 53.9 51 60.8
Manes.08G047100 Manihot esculenta HOM05D000064 ORTHO05D001307 8.9e-06 53.9 64 48.4
Thecc.05G166200 Theobroma cacao HOM05D000064 ORTHO05D001307 8.9e-06 53.9 34 79.4


User provided reference genes

Program Settings