Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0016486 Camellia sinensis var. sinensis HOM05D006581 ORTHO05D007870 6.6e-285 983.4 512 100.0
Actinidia27421 Actinidia chinensis HOM05D006581 ORTHO05D007870 6.1e-206 721.1 478 79.5
Rhsim07G0097400 Rhododendron simsii HOM05D006581 ORTHO05D007870 2.7e-198 695.7 478 77.2
Dinv37725 Davidia involucrata HOM05D006581 ORTHO05D007870 7.0e-194 681.0 478 75.7
CSS0046982 Camellia sinensis var. sinensis HOM05D006581 ORTHO05D007870 4.2e-183 645.2 525 73.7
Cfa012052 Carpinus fangiana HOM05D006581 ORTHO05D007870 2.0e-177 626.3 482 68.5
Haze_09013 Corylus avellana HOM05D006581 ORTHO05D007870 1.7e-176 623.2 482 68.7
Dinv39047 Davidia involucrata HOM05D006581 ORTHO05D007870 2.5e-175 619.4 478 70.7
QL12p015968 Quercus lobata HOM05D006581 ORTHO05D007870 1.2e-174 617.1 483 68.1
GSVIVG01019912001 Vitis vinifera HOM05D006581 ORTHO05D007870 3.0e-173 612.5 485 67.4
Lj8A253T47 Lonicera japonica HOM05D006581 ORTHO05D007870 5.7e-172 608.2 478 67.2
Hma1.2p1_0017F.1_g011220 Hydrangea macrophylla HOM05D006581 ORTHO05D007870 2.7e-169 599.4 479 67.6
Hma1.2p1_0017F.1_g011230 Hydrangea macrophylla HOM05D006581 ORTHO05D007870 2.7e-169 599.4 479 67.6
Ciclev10014277m.g Citrus clementina HOM05D006581 ORTHO05D007870 6.2e-166 588.2 486 63.6
CiPaw.08G049100 Carya illinoinensis HOM05D006581 ORTHO05D007870 8.0e-166 587.8 483 65.4
RcHm_v2.0_Chr4g0398711 Rosa chinensis HOM05D006581 ORTHO05D007870 3.7e-163 578.9 484 65.3
Potri.008G016000 Populus trichocarpa HOM05D006581 ORTHO05D007870 4.9e-163 578.6 483 64.0
Atru.chr12.1085 Acer truncatum HOM05D006581 ORTHO05D007870 9.2e-162 574.3 485 63.5
FAN17G3070 Fragaria x ananassa HOM05D006581 ORTHO05D007870 2.7e-161 572.8 485 64.3
FAN12G3574 Fragaria x ananassa HOM05D006581 ORTHO05D007870 1.3e-160 570.5 485 63.9
FvH4_4g06790 Fragaria vesca HOM05D006581 ORTHO05D007870 2.3e-160 569.7 485 63.9
Prupe.1G071100 Prunus persica HOM05D006581 ORTHO05D007870 1.5e-159 567.0 484 64.5
Sabra08G0009700 Salix brachista HOM05D006581 ORTHO05D007870 2.5e-159 566.2 483 62.5
Duzib128G1875 Durio zibethinus HOM05D006581 ORTHO05D007870 7.3e-159 564.7 489 61.8
Cpa.g.sc33.130 Carica papaya HOM05D006581 ORTHO05D007870 1.2e-158 563.9 486 60.5
Gorai.N007200 Gossypium raimondii HOM05D006581 ORTHO05D007870 2.8e-158 562.8 486 61.1
Gohir.A06G170200 Gossypium hirsutum HOM05D006581 ORTHO05D007870 4.7e-158 562.0 486 61.1
Lj8C252T14 Lonicera japonica HOM05D006581 ORTHO05D007870 4.7e-158 562.0 478 63.2
Gohir.D06G178000 Gossypium hirsutum HOM05D006581 ORTHO05D007870 1.4e-157 560.5 487 61.2
MD15G1394600 Malus domestica HOM05D006581 ORTHO05D007870 1.5e-156 557.0 487 62.6
TWI38G0425 Tripterygium wilfordii HOM05D006581 ORTHO05D007870 1.5e-156 557.0 488 61.1
TAR629G0084 Trochodendron aralioides HOM05D006581 ORTHO05D007870 2.0e-156 556.6 483 63.4
Thecc.10G119000 Theobroma cacao HOM05D006581 ORTHO05D007870 2.6e-156 556.2 487 60.8
Nitab4.5_0010186g0020 Nicotiana tabacum HOM05D006581 ORTHO05D007870 1.3e-155 553.9 478 60.0
DCAR_000885 Daucus carota HOM05D006581 ORTHO05D007870 2.2e-155 553.1 478 63.4
Solyc08g079810.4 Solanum lycopersicum HOM05D006581 ORTHO05D007870 8.3e-155 551.2 489 58.7
Oeu001905.1 Olea europaea HOM05D006581 ORTHO05D007870 1.1e-154 550.8 476 61.8
Sopen08g028170 Solanum pennellii HOM05D006581 ORTHO05D007870 1.4e-154 550.4 489 58.9
ECA233G4444 Erigeron canadensis HOM05D006581 ORTHO05D007870 4.1e-154 548.9 479 60.1
Peaxi162Scf00620g00237 Petunia axillaris HOM05D006581 ORTHO05D007870 1.6e-153 547.0 478 60.5
Nitab4.5_0005167g0030 Nicotiana tabacum HOM05D006581 ORTHO05D007870 2.1e-153 546.6 489 58.5
FAN07G0243 Fragaria x ananassa HOM05D006581 ORTHO05D007870 6.0e-153 545.0 507 60.4
Nn3g19980 Nelumbo nucifera HOM05D006581 ORTHO05D007870 1.0e-152 544.3 481 59.5
PGSC0003DMG400003942 Solanum tuberosum HOM05D006581 ORTHO05D007870 3.0e-152 542.7 489 58.1
CANSAT78G1168 Cannabis sativa HOM05D006581 ORTHO05D007870 4.3e-151 538.9 482 59.5
Lsat_1_v5_gn_8_138880 Lactuca sativa HOM05D006581 ORTHO05D007870 2.1e-150 536.6 480 59.4
Cc03_g06340 Coffea canephora HOM05D006581 ORTHO05D007870 5.2e-149 531.9 478 59.2
Sed0002136 Sechium edule HOM05D006581 ORTHO05D007870 9.9e-148 527.7 484 58.9
ClCG00G000120 Citrullus lanatus HOM05D006581 ORTHO05D007870 4.9e-147 525.4 484 57.9
ClCG10G003370 Citrullus lanatus HOM05D006581 ORTHO05D007870 2.4e-146 523.1 484 57.6
Lalb_Chr01g0006991 Lupinus albus HOM05D006581 ORTHO05D007870 2.5e-143 513.1 483 56.5
Eucgr.E00519 Eucalyptus grandis HOM05D006581 ORTHO05D007870 2.4e-141 506.5 493 55.8
Aqoxy7G00548 Aquilegia oxysepala HOM05D006581 ORTHO05D007870 6.9e-141 505.0 482 55.6
Lj3g0012962 Lotus japonicus HOM05D006581 ORTHO05D007870 5.8e-140 501.9 484 57.4
CsaV3_3G003400 Cucumis sativus L. HOM05D006581 ORTHO05D007870 6.4e-139 498.4 484 56.6
arahy.Tifrunner.gnm1.ann1.J373DC Arachis hypogaea HOM05D006581 ORTHO05D007870 1.4e-138 497.3 483 55.9
Migut.E01071 Erythranthe guttata HOM05D006581 ORTHO05D007870 4.2e-138 495.7 481 58.4
AUR62004835 Chenopodium quinoa HOM05D006581 ORTHO05D007870 5.4e-138 495.4 487 55.6
arahy.Tifrunner.gnm1.ann1.MU0C19 Arachis hypogaea HOM05D006581 ORTHO05D007870 1.6e-137 493.8 483 55.7
MELO3C014006.2 Cucumis melo HOM05D006581 ORTHO05D007870 1.6e-137 493.8 484 56.4
AUR62040923 Chenopodium quinoa HOM05D006581 ORTHO05D007870 1.0e-136 491.1 487 55.9
Ca_14132_v3 Cicer arietinum L. HOM05D006581 ORTHO05D007870 3.6e-134 482.6 487 53.8
Manes.10G064500 Manihot esculenta HOM05D006581 ORTHO05D007870 3.1e-133 479.6 487 55.9
PSO782G3179 Papaver somniferum HOM05D006581 ORTHO05D007870 9.9e-132 474.6 488 53.9
PSO478G1557 Papaver somniferum HOM05D006581 ORTHO05D007870 1.9e-130 470.3 489 53.6
Sc01g0009010 Simmondsia chinensis HOM05D006581 ORTHO05D007870 2.4e-130 469.9 486 53.7
AT1G73970 Arabidopsis thaliana HOM05D006581 ORTHO05D007870 5.4e-130 468.8 482 52.9
Hund14684 Selenicereus undatus HOM05D006581 ORTHO05D007870 4.6e-129 465.7 487 52.8
EL10Ac5g12666 Beta vulgaris HOM05D006581 ORTHO05D007870 3.9e-128 462.6 495 52.7
AL2G33810 Arabidopsis lyrata HOM05D006581 ORTHO05D007870 5.6e-127 458.8 483 51.8
SalBow7G1099 Salvia bowleyana HOM05D006581 ORTHO05D007870 9.6e-127 458.0 482 55.4
SGA_v2.0_scaffold196G40922 Striga asiatica HOM05D006581 ORTHO05D007870 9.6e-127 458.0 481 53.4
THA.LOC104812128 Tarenaya hassleriana HOM05D006581 ORTHO05D007870 9.6e-127 458.0 462 53.9
Sp5g29170 Schrenkiella parvula HOM05D006581 ORTHO05D007870 2.1e-126 456.8 485 52.4
Aa31LG4G4270 Aethionema arabicum HOM05D006581 ORTHO05D007870 1.1e-125 454.5 483 50.1
Psat7g256920 Pisum sativum HOM05D006581 ORTHO05D007870 1.4e-125 454.1 494 50.2
ClCG00G004880 Citrullus lanatus HOM05D006581 ORTHO05D007870 2.4e-125 453.4 419 57.8
CARHR067090 Cardamine hirsuta HOM05D006581 ORTHO05D007870 3.1e-125 453.0 474 51.7
TPR.G5149 Trifolium pratense HOM05D006581 ORTHO05D007870 2.6e-124 449.9 477 51.6
Thhalv10018136m.g Eutrema salsugineum HOM05D006581 ORTHO05D007870 6.4e-123 445.3 483 51.1
Carub.0002s2075 Capsella rubella HOM05D006581 ORTHO05D007870 9.3e-122 441.4 482 51.2
BraA07t31529Z Brassica rapa HOM05D006581 ORTHO05D007870 3.5e-121 439.5 475 51.4
Medtr3g010350 Medicago truncatula HOM05D006581 ORTHO05D007870 4.6e-121 439.1 490 50.4
Ah.02g116280 Amaranthus hybridus HOM05D006581 ORTHO05D007870 7.9e-121 438.3 487 50.7
A07p39830 Brassica napus HOM05D006581 ORTHO05D007870 2.3e-120 436.8 475 51.2
BolC6t39844H Brassica oleracea HOM05D006581 ORTHO05D007870 3.9e-120 436.0 480 51.2
HanXRQChr04g0124681 Helianthus annuus HOM05D006581 ORTHO05D007870 5.1e-120 435.6 414 55.3
C06p48090 Brassica napus HOM05D003462 ORTHO05D007870 8.7e-120 434.9 479 50.9
MBI12_g26094_MAGBIO Magnolia biondii HOM05D006581 ORTHO05D007870 8.1e-118 428.3 473 50.5
SHI19174 Sapria himalayana HOM05D006581 ORTHO05D007870 1.7e-115 420.6 488 49.8
BcaC08g46826 Brassica carinata HOM05D006581 ORTHO05D007870 1.1e-109 401.4 480 48.5
COL.COLO4_10009 Corchorus olitorius HOM05D006581 ORTHO05D007870 2.5e-103 380.2 489 46.6
MBI12_g05899_MAGBIO Magnolia biondii HOM05D006581 ORTHO05D007870 4.3e-103 379.4 473 48.6
VMungo1080G1314 Vigna mungo HOM05D006581 ORTHO05D007870 1.1e-101 374.8 489 46.8
unitig_26.g9687 Utricularia gibba HOM05D006581 ORTHO05D007870 8.5e-99 365.2 478 44.1
Glyma.06G323200 Glycine max HOM05D006581 ORTHO05D007870 1.1e-98 364.8 495 47.1
Phvul.005G003000 Phaseolus vulgaris HOM05D006581 ORTHO05D007870 1.9e-98 364.0 488 46.5
CDE05G1723 Ceratophyllum demersum HOM05D006581 ORTHO05D007870 2.0e-92 344.0 474 43.2
ATR0757G052 Amborella trichopoda HOM05D006581 ORTHO05D007870 2.9e-83 313.5 480 41.2
Medtr4g059740 Medicago truncatula HOM05D006581 ORTHO05D007870 6.3e-62 242.7 300 47.0
Hma1.2p1_0138F.1_g062900 Hydrangea macrophylla HOM05D006581 ORTHO05D007870 1.2e-52 211.8 436 37.8
SEGI_01852 Sequoiadendron giganteum HOM05D006581 ORTHO05D007870 7.0e-45 186.0 511 31.1
Os02g0123400 Oryza sativa ssp. japonica HOM05D006581 ORTHO05D007870 1.4e-40 171.8 458 29.9
Zm00001eb230550 Zea mays HOM05D006581 ORTHO05D007870 1.8e-40 171.4 472 30.5
Pp3c5_4510 Physcomitrium patens HOM05D006581 ORTHO05D007870 4.9e-30 136.7 522 26.4
vmacro14025 Vaccinium macrocarpon HOM05D006581 ORTHO05D007870 9.2e-29 132.5 75 85.3
Sabra10G0190600 Salix brachista HOM05D006581 ORTHO05D007870 6.0e-28 129.8 156 50.6
Mapoly0035s0119 Marchantia polymorpha HOM05D006581 ORTHO05D007870 1.0e-27 129.0 561 24.2
SMO118G0399 Selaginella moellendorffii HOM05D006581 ORTHO05D007870 1.2e-12 79.0 495 25.9
AagrBONN_evm.TU.Sc2ySwM_228.3501 Anthoceros agrestis HOM05D006581 ORTHO05D007870 7.6e-07 59.7 163 26.4


User provided reference genes

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