Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0016449 Camellia sinensis var. sinensis HOM05D006266 ORTHO05D008016 3.5e-67 258.1 124 100.0
Cpa.g.sc9.312 Carica papaya HOM05D006266 ORTHO05D008016 6.5e-53 210.7 106 95.3
Dinv44175 Davidia involucrata HOM05D006266 ORTHO05D008016 1.4e-52 209.5 106 93.4
vmacro00635 Vaccinium macrocarpon HOM05D006266 ORTHO05D008016 1.4e-52 209.5 106 94.3
CANSAT78G1968 Cannabis sativa HOM05D006266 ORTHO05D008016 1.2e-51 206.5 106 91.5
PGR142G3304 Punica granatum HOM05D006266 ORTHO05D008016 2.7e-51 205.3 107 90.7
Sabra17G0016500 Salix brachista HOM05D006266 ORTHO05D008016 6.1e-51 204.1 106 90.6
MBI07_g02893_MAGBIO Magnolia biondii HOM05D006266 ORTHO05D008016 1.0e-50 203.4 106 87.7
AUR62023848 Chenopodium quinoa HOM05D006266 ORTHO05D008016 1.8e-50 202.6 110 84.5
TAR362G0699 Trochodendron aralioides HOM05D006266 ORTHO05D008016 1.8e-50 202.6 106 89.6
Duzib151G0889 Durio zibethinus HOM05D006266 ORTHO05D008016 3.0e-50 201.8 106 89.6
Potri.017G027500 Populus trichocarpa HOM05D006266 ORTHO05D008016 3.9e-50 201.4 106 90.6
Aqoxy2G04160 Aquilegia oxysepala HOM05D006266 ORTHO05D008016 5.1e-50 201.1 106 88.7
QL10p050722 Quercus lobata HOM05D006266 ORTHO05D008016 6.7e-50 200.7 106 90.6
Lj3C1G0 Lonicera japonica HOM05D006266 ORTHO05D008016 8.7e-50 200.3 113 86.7
Lj3C32G4 Lonicera japonica HOM05D006266 ORTHO05D008016 8.7e-50 200.3 113 86.7
MD04G1042900 Malus domestica HOM05D006266 ORTHO05D008016 8.7e-50 200.3 106 88.7
Thecc.04G175700 Theobroma cacao HOM05D006266 ORTHO05D008016 8.7e-50 200.3 106 88.7
Cfa015189 Carpinus fangiana HOM05D006266 ORTHO05D008016 1.1e-49 199.9 106 90.6
Gohir.A10G139200 Gossypium hirsutum HOM05D006266 ORTHO05D008016 1.9e-49 199.1 106 89.6
Gohir.D10G127600 Gossypium hirsutum HOM05D006266 ORTHO05D008016 1.9e-49 199.1 106 89.6
Gorai.011G140700 Gossypium raimondii HOM05D006266 ORTHO05D008016 1.9e-49 199.1 106 89.6
THA.LOC104805138 Tarenaya hassleriana HOM05D006266 ORTHO05D008016 1.9e-49 199.1 106 88.7
Manes.11G123500 Manihot esculenta HOM05D006266 ORTHO05D008016 2.5e-49 198.7 106 90.6
Nn7g37595 Nelumbo nucifera HOM05D006266 ORTHO05D008016 3.3e-49 198.4 106 87.7
Prupe.1G197500 Prunus persica HOM05D006266 ORTHO05D008016 3.3e-49 198.4 106 88.7
Hund12414 Selenicereus undatus HOM05D006266 ORTHO05D008016 4.3e-49 198.0 106 87.7
Ah.07g202330 Amaranthus hybridus HOM05D006266 ORTHO05D008016 5.7e-49 197.6 106 84.9
Medtr2g099040 Medicago truncatula HOM05D006266 ORTHO05D008016 7.4e-49 197.2 106 87.7
GSVIVG01010835001 Vitis vinifera HOM05D006266 ORTHO05D008016 9.7e-49 196.8 104 88.5
EL10Ac3g06005 Beta vulgaris HOM05D006266 ORTHO05D008016 1.3e-48 196.4 106 86.8
Ciclev10019615m.g Citrus clementina HOM05D006266 ORTHO05D008016 1.3e-48 196.4 106 88.7
Solyc12g021170.2 Solanum lycopersicum HOM05D006266 ORTHO05D008016 1.3e-48 196.4 106 85.8
Oeu024477.1 Olea europaea HOM05D006266 ORTHO05D008016 2.8e-48 195.3 104 88.5
CsaV3_3G015950 Cucumis sativus L. HOM05D006266 ORTHO05D008016 3.7e-48 194.9 110 81.8
Sp4g25480 Schrenkiella parvula HOM05D006266 ORTHO05D008016 4.8e-48 194.5 106 84.9
ClCG05G007190 Citrullus lanatus HOM05D006266 ORTHO05D008016 8.2e-48 193.7 106 84.0
Sopen02g004370 Solanum pennellii HOM05D006266 ORTHO05D008016 8.2e-48 193.7 104 86.5
Sopen12g011050 Solanum pennellii HOM05D006266 ORTHO05D008016 8.2e-48 193.7 104 86.5
arahy.Tifrunner.gnm1.ann1.D6UD48 Arachis hypogaea HOM05D006266 ORTHO05D008016 1.1e-47 193.4 106 85.8
arahy.Tifrunner.gnm1.ann1.JU07H9 Arachis hypogaea HOM05D006266 ORTHO05D008016 1.1e-47 193.4 106 85.8
Eucgr.H00345 Eucalyptus grandis HOM05D006266 ORTHO05D008016 1.1e-47 193.4 104 83.7
Lalb_Chr14g0372511 Lupinus albus HOM05D006266 ORTHO05D008016 1.1e-47 193.4 106 86.8
Sc19g0002870 Simmondsia chinensis HOM05D006266 ORTHO05D008016 1.1e-47 193.4 106 84.9
Aa31LG1G25150 Aethionema arabicum HOM05D006266 ORTHO05D008016 1.4e-47 193.0 106 85.8
ATR0743G015 Amborella trichopoda HOM05D006266 ORTHO05D008016 1.4e-47 193.0 106 83.0
MSTRG.4284 Avicennia marina HOM05D006266 ORTHO05D008016 1.4e-47 193.0 106 84.9
CiPaw.02G052400 Carya illinoinensis HOM05D006266 ORTHO05D008016 1.4e-47 193.0 104 87.5
FvH4_4g10960 Fragaria vesca HOM05D006266 ORTHO05D008016 1.4e-47 193.0 106 84.9
FAN12G3251 Fragaria x ananassa HOM05D006266 ORTHO05D008016 1.4e-47 193.0 106 84.9
FAN17G0658 Fragaria x ananassa HOM05D006266 ORTHO05D008016 1.4e-47 193.0 106 84.9
PSO675G5931 Papaver somniferum HOM05D006266 ORTHO05D008016 1.8e-47 192.6 106 87.7
DCAR_028531 Daucus carota HOM05D006266 ORTHO05D008016 2.4e-47 192.2 106 84.0
Lj3g0007796 Lotus japonicus HOM05D006266 ORTHO05D008016 2.4e-47 192.2 106 84.9
SGA_v2.0_scaffold17G08154 Striga asiatica HOM05D006266 ORTHO05D008016 2.4e-47 192.2 106 84.9
Thhalv10001353m.g Eutrema salsugineum HOM05D006266 ORTHO05D008016 3.1e-47 191.8 106 83.0
Ca_01251_v3 Cicer arietinum L. HOM05D006266 ORTHO05D008016 4.1e-47 191.4 106 84.9
RcHm_v2.0_Chr4g0406421 Rosa chinensis HOM05D006266 ORTHO05D008016 4.1e-47 191.4 106 84.9
TPR.G18865 Trifolium pratense HOM05D006266 ORTHO05D008016 4.1e-47 191.4 106 84.9
CDE09G1029 Ceratophyllum demersum HOM05D006266 ORTHO05D008016 5.3e-47 191.0 106 83.0
Nitab4.5_0000505g0020 Nicotiana tabacum HOM05D006266 ORTHO05D008016 5.3e-47 191.0 106 84.0
PSO017G5469 Papaver somniferum HOM05D006266 ORTHO05D008016 6.9e-47 190.7 106 86.8
Glyma.15G029200 Glycine max HOM05D006266 ORTHO05D008016 9.0e-47 190.3 106 84.0
Nitab4.5_0001990g0030 Nicotiana tabacum HOM05D006266 ORTHO05D008016 9.0e-47 190.3 106 84.0
Atru.chr4.1256 Acer truncatum HOM05D006266 ORTHO05D008016 2.0e-46 189.1 106 84.0
AT2G43400 Arabidopsis thaliana HOM05D006266 ORTHO05D008016 2.0e-46 189.1 106 83.0
Migut.G01347 Erythranthe guttata HOM05D006266 ORTHO05D008016 2.0e-46 189.1 108 83.3
AL4G42140 Arabidopsis lyrata HOM05D006266 ORTHO05D008016 2.6e-46 188.7 106 83.0
Carub.0004s2587 Capsella rubella HOM05D006266 ORTHO05D008016 2.6e-46 188.7 106 83.0
BcaC02g12401 Brassica carinata HOM05D006266 ORTHO05D008016 4.5e-46 188.0 106 82.1
A05p03740 Brassica napus HOM05D006266 ORTHO05D008016 4.5e-46 188.0 106 82.1
BraA05t19361Z Brassica rapa HOM05D006266 ORTHO05D008016 4.5e-46 188.0 106 82.1
C04p04440 Brassica napus HOM05D006266 ORTHO05D008016 5.9e-46 187.6 106 81.1
BolC4t22077H Brassica oleracea HOM05D006266 ORTHO05D008016 5.9e-46 187.6 106 81.1
Cc03_g11980 Coffea canephora HOM05D006266 ORTHO05D008016 1.3e-45 186.4 104 85.6
Zm00001eb043590 Zea mays HOM05D006266 ORTHO05D008016 1.3e-45 186.4 106 80.2
Psat5g289640 Pisum sativum HOM05D006266 ORTHO05D008016 1.7e-45 186.0 106 80.2
Sed0000993 Sechium edule HOM05D006266 ORTHO05D008016 3.8e-45 184.9 106 82.1
Phvul.005G153800 Phaseolus vulgaris HOM05D006266 ORTHO05D008016 5.0e-45 184.5 106 80.2
VMungo1080G0961 Vigna mungo HOM05D006266 ORTHO05D008016 8.5e-45 183.7 106 80.2
Lsat_1_v5_gn_1_77821 Lactuca sativa HOM05D006266 ORTHO05D008016 2.5e-44 182.2 114 78.9
SEGI_14637 Sequoiadendron giganteum HOM05D006266 ORTHO05D008016 2.5e-44 182.2 106 79.2
HanXRQChr01g0023481 Helianthus annuus HOM05D006266 ORTHO05D008016 3.2e-44 181.8 106 83.0
CARHR138470 Cardamine hirsuta HOM05D006266 ORTHO05D008016 7.2e-44 180.6 106 78.3
CAN.G51.9 Capsicum annuum HOM05D006266 ORTHO05D008016 9.4e-44 180.3 106 77.4
HPP92_022167 Vanilla planifolia HOM05D006266 ORTHO05D008016 1.6e-43 179.5 106 78.3
AagrBONN_evm.TU.Sc2ySwM_117.3933 Anthoceros agrestis HOM05D006266 ORTHO05D008016 4.6e-43 177.9 106 76.4
Mapoly0012s0124 Marchantia polymorpha HOM05D006266 ORTHO05D008016 7.9e-43 177.2 106 76.4
Rhsim09G0023000 Rhododendron simsii HOM05D006266 ORTHO05D008016 7.9e-43 177.2 169 58.0
Pp3c26_13090 Physcomitrium patens HOM05D006266 ORTHO05D008016 1.7e-40 169.5 106 73.6
SMO141G0282 Selaginella moellendorffii HOM05D006266 ORTHO05D008016 1.4e-39 166.4 104 73.1
Haze_01464 Corylus avellana HOM05D006266 ORTHO05D008016 4.1e-39 164.9 209 47.4
Actinidia27081 Actinidia chinensis HOM05D006266 ORTHO05D008016 1.9e-36 156.0 106 74.5
Os10g0516300 Oryza sativa ssp. japonica HOM05D006266 ORTHO05D008016 4.2e-36 154.8 86 80.2
ECA248G0977 Erigeron canadensis HOM05D006266 ORTHO05D008016 2.0e-30 136.0 81 76.5
MELO3C006791.2 Cucumis melo HOM05D005231 ORTHO05D006387 6.5e-29 131.0 70 87.1
SEGI_29623 Sequoiadendron giganteum HOM05D006266 ORTHO05D008016 6.5e-29 131.0 71 84.5
unitig_52.g17681 Utricularia gibba HOM05D006266 ORTHO05D008016 9.4e-28 127.1 70 82.9
PRCOL_00003135 Prasinoderma coloniale HOM05D006266 ORTHO05D008016 2.1e-27 125.9 108 58.3
Peaxi162Scf00184g00418 Petunia axillaris HOM05D006266 ORTHO05D008016 1.8e-26 122.9 106 61.3
Haze_26951 Corylus avellana HOM05D006266 ORTHO05D008016 2.0e-25 119.4 111 56.8
Cre02.g094300 Chlamydomonas reinhardtii HOM05D006266 ORTHO05D008016 9.7e-25 117.1 109 56.9
Cfa026422 Carpinus fangiana HOM05D006266 ORTHO05D008016 1.1e-23 113.6 113 55.8
Haze_26227 Corylus avellana HOM05D006266 ORTHO05D008016 3.1e-23 112.1 112 50.9
arahy.Tifrunner.gnm1.ann1.QA6FBH Arachis hypogaea HOM05D006266 ORTHO05D008016 1.3e-13 80.1 46 82.6
Dinv44151 Davidia involucrata HOM05D006266 ORTHO05D008016 4.2e-12 75.1 35 91.4
Hma1.2p1_0324F.1_g125550 Hydrangea macrophylla HOM05D006266 ORTHO05D008016 6.8e-10 67.8 35 85.7
Sp4g25500 Schrenkiella parvula HOM05D000001 ORTHO05D000003 3.5e-06 55.5 33 72.7
SEGI_11902 Sequoiadendron giganteum HOM05D006266 ORTHO05D008016 3.5e-06 55.5 35 68.6


User provided reference genes

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