Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0016395 Camellia sinensis var. sinensis HOM05D005543 ORTHO05D006584 1.3e-84 317.0 247 100.0
Oeu022061.1 Olea europaea HOM05D005543 ORTHO05D006584 3.0e-25 119.8 67 85.1
vmacro21199 Vaccinium macrocarpon HOM05D005543 ORTHO05D006584 1.9e-24 117.1 67 83.6
Psat0s2687g0120 Pisum sativum HOM05D005543 ORTHO05D006584 1.3e-23 114.4 75 74.7
Actinidia17758 Actinidia chinensis HOM05D005543 ORTHO05D006584 1.6e-23 114.0 75 77.3
Hma1.2p1_0276F.1_g110980 Hydrangea macrophylla HOM05D005543 ORTHO05D006584 1.1e-22 111.3 75 73.3
Duzib116G0276 Durio zibethinus HOM05D005543 ORTHO05D006584 1.4e-22 110.9 67 76.1
Dinv41020 Davidia involucrata HOM05D005543 ORTHO05D006584 1.8e-22 110.5 75 72.0
TPR.G22092 Trifolium pratense HOM05D005543 ORTHO05D006584 4.0e-22 109.4 68 75.0
Thecc.08G164300 Theobroma cacao HOM05D005543 ORTHO05D006584 5.3e-22 109.0 67 71.6
MSTRG.22116 Avicennia marina HOM05D005543 ORTHO05D006584 6.9e-22 108.6 68 72.1
CSS0010673 Camellia sinensis var. sinensis HOM05D005543 ORTHO05D006584 6.9e-22 108.6 75 70.7
Gorai.009G259700 Gossypium raimondii HOM05D005543 ORTHO05D006584 9.0e-22 108.2 67 74.6
Peaxi162Scf00226g00217 Petunia axillaris HOM05D005543 ORTHO05D006584 9.0e-22 108.2 68 72.1
SGA_v2.0_scaffold166G38393 Striga asiatica HOM05D005543 ORTHO05D006584 9.0e-22 108.2 67 73.1
Nn5g28876 Nelumbo nucifera HOM05D005543 ORTHO05D006584 1.2e-21 107.8 74 66.2
Phvul.004G088200 Phaseolus vulgaris HOM05D005543 ORTHO05D006584 1.2e-21 107.8 68 73.5
Glyma.16G160100 Glycine max HOM05D005543 ORTHO05D006584 1.5e-21 107.5 75 68.0
Medtr6g034680 Medicago truncatula HOM05D005543 ORTHO05D006584 1.5e-21 107.5 75 69.3
Gohir.D05G248600 Gossypium hirsutum HOM05D005543 ORTHO05D006584 2.0e-21 107.1 67 73.1
VMungo0464G0571 Vigna mungo HOM05D005543 ORTHO05D006584 2.6e-21 106.7 68 72.1
Eucgr.F04165 Eucalyptus grandis HOM05D005543 ORTHO05D006584 3.4e-21 106.3 67 73.1
Ca_04656_v3 Cicer arietinum L. HOM05D005543 ORTHO05D006584 4.5e-21 105.9 75 68.0
Gohir.A05G247100 Gossypium hirsutum HOM05D005543 ORTHO05D006584 4.5e-21 105.9 67 71.6
TWI53G2072 Tripterygium wilfordii HOM05D005543 ORTHO05D006584 4.5e-21 105.9 67 73.1
CANSAT25G2335 Cannabis sativa HOM05D005543 ORTHO05D006584 5.8e-21 105.5 67 71.6
COL.COLO4_13722 Corchorus olitorius HOM05D005543 ORTHO05D006584 5.8e-21 105.5 67 73.1
ECA232G2646 Erigeron canadensis HOM05D005543 ORTHO05D006584 1.0e-20 104.8 70 75.7
Lj2g0006240 Lotus japonicus HOM05D005543 ORTHO05D006584 1.3e-20 104.4 75 65.3
QL02p036792 Quercus lobata HOM05D005543 ORTHO05D006584 1.3e-20 104.4 67 71.6
Solyc04g072120.2 Solanum lycopersicum HOM05D005543 ORTHO05D006584 1.3e-20 104.4 68 70.6
Sopen04g028180 Solanum pennellii HOM05D000002 ORTHO05D000047 1.3e-20 104.4 68 70.6
Sopen04g028290 Solanum pennellii HOM05D005543 ORTHO05D006584 1.3e-20 104.4 68 70.6
PGSC0003DMG400031139 Solanum tuberosum HOM05D005543 ORTHO05D006584 1.3e-20 104.4 68 70.6
Haze_17839 Corylus avellana HOM05D005543 ORTHO05D006584 1.7e-20 104.0 67 70.1
Potri.002G062300 Populus trichocarpa HOM05D005543 ORTHO05D006584 3.8e-20 102.8 68 72.1
Sabra02G0050300 Salix brachista HOM05D005543 ORTHO05D006584 3.8e-20 102.8 67 71.6
TAR381G0628 Trochodendron aralioides HOM05D005543 ORTHO05D006584 3.8e-20 102.8 74 68.9
CiPaw.16G007100 Carya illinoinensis HOM05D005543 ORTHO05D006584 4.9e-20 102.4 67 71.6
Atru.chr13.1972 Acer truncatum HOM05D005543 ORTHO05D006584 6.5e-20 102.1 67 65.7
Sabra05G0151400 Salix brachista HOM05D005543 ORTHO05D006584 6.5e-20 102.1 67 68.7
Haze_17833 Corylus avellana HOM05D005543 ORTHO05D006584 8.4e-20 101.7 67 68.7
Lsat_1_v5_gn_9_42581 Lactuca sativa HOM05D005543 ORTHO05D006584 8.4e-20 101.7 79 64.6
TAR625G0687 Trochodendron aralioides HOM05D005543 ORTHO05D006584 8.4e-20 101.7 74 63.5
Nitab4.5_0001000g0150 Nicotiana tabacum HOM05D005543 ORTHO05D006584 1.1e-19 101.3 68 67.6
Nitab4.5_0000433g0010 Nicotiana tabacum HOM05D005543 ORTHO05D006584 1.4e-19 100.9 68 67.6
Lalb_Chr06g0161821 Lupinus albus HOM05D005543 ORTHO05D006584 1.9e-19 100.5 67 67.2
RcHm_v2.0_Chr6g0273681 Rosa chinensis HOM05D005543 ORTHO05D006584 1.9e-19 100.5 67 71.6
arahy.Tifrunner.gnm1.ann1.FFL75L Arachis hypogaea HOM05D005543 ORTHO05D006584 2.5e-19 100.1 67 67.2
Cc10_g06390 Coffea canephora HOM05D005543 ORTHO05D006584 2.5e-19 100.1 76 65.8
Nitab4.5_0002585g0010 Nicotiana tabacum HOM05D005543 ORTHO05D006584 2.5e-19 100.1 69 69.6
Migut.N02941 Erythranthe guttata HOM05D005543 ORTHO05D006584 4.2e-19 99.4 74 64.9
HanXRQChr11g0320551 Helianthus annuus HOM05D005543 ORTHO05D006584 5.5e-19 99.0 70 68.6
Peaxi162Scf00160g01739 Petunia axillaris HOM05D005543 ORTHO05D006584 9.3e-19 98.2 69 68.1
FAN15G0123 Fragaria x ananassa HOM05D005543 ORTHO05D006584 1.6e-18 97.4 67 65.7
Manes.02G185600 Manihot esculenta HOM05D005543 ORTHO05D006584 1.6e-18 97.4 68 66.2
GSVIVG01013678001 Vitis vinifera HOM05D005543 ORTHO05D006584 1.6e-18 97.4 67 70.1
arahy.Tifrunner.gnm1.ann1.XA0Q13 Arachis hypogaea HOM05D005543 ORTHO05D006584 2.1e-18 97.1 67 64.2
FvH4_2g12791 Fragaria vesca HOM05D005543 ORTHO05D006584 2.1e-18 97.1 67 67.2
MD10G1038300 Malus domestica HOM05D005543 ORTHO05D006584 2.1e-18 97.1 67 61.2
Nitab4.5_0004541g0020 Nicotiana tabacum HOM05D005543 ORTHO05D006584 2.1e-18 97.1 69 66.7
PGR102G0915 Punica granatum HOM05D005543 ORTHO05D006584 2.1e-18 97.1 68 67.6
PSO541G4578 Papaver somniferum HOM05D005543 ORTHO05D006584 2.7e-18 96.7 74 62.2
unitig_578.g16221 Utricularia gibba HOM05D005543 ORTHO05D006584 2.7e-18 96.7 72 63.9
MD05G1036200 Malus domestica HOM05D005543 ORTHO05D006584 3.5e-18 96.3 67 61.2
Prupe.8G044500 Prunus persica HOM05D005543 ORTHO05D006584 4.6e-18 95.9 67 67.2
PGSC0003DMG400016956 Solanum tuberosum HOM05D005543 ORTHO05D006584 4.6e-18 95.9 69 65.2
PSO675G1818 Papaver somniferum HOM05D005543 ORTHO05D006584 6.0e-18 95.5 74 60.8
Aqoxy6G00453 Aquilegia oxysepala HOM05D005543 ORTHO05D006584 1.0e-17 94.7 67 64.2
SalBow6G1236 Salvia bowleyana HOM05D005543 ORTHO05D006584 1.0e-17 94.7 67 67.2
EL10Ac1g01633 Beta vulgaris HOM05D005543 ORTHO05D006584 2.3e-17 93.6 68 58.8
Ciclev10002600m.g Citrus clementina HOM05D005543 ORTHO05D006584 2.3e-17 93.6 67 59.7
DCAR_019968 Daucus carota HOM05D005543 ORTHO05D006584 2.3e-17 93.6 67 64.2
Sc20g0003140 Simmondsia chinensis HOM05D005543 ORTHO05D006584 2.3e-17 93.6 70 58.6
Hund17502 Selenicereus undatus HOM05D005543 ORTHO05D006584 3.0e-17 93.2 69 63.8
Lj5g0027482 Lotus japonicus HOM05D005543 ORTHO05D006584 3.9e-17 92.8 72 61.1
THA.LOC104800097 Tarenaya hassleriana HOM05D005543 ORTHO05D006584 5.1e-17 92.4 67 62.7
AUR62034923 Chenopodium quinoa HOM05D005543 ORTHO05D006584 6.7e-17 92.0 68 57.4
Solyc12g056760.2 Solanum lycopersicum HOM05D005543 ORTHO05D006584 6.7e-17 92.0 69 62.3
AUR62026611 Chenopodium quinoa HOM05D005543 ORTHO05D006584 1.5e-16 90.9 68 55.9
Sopen12g029440 Solanum pennellii HOM05D005543 ORTHO05D006584 1.5e-16 90.9 69 60.9
FAN24G1753 Fragaria x ananassa HOM05D005543 ORTHO05D006584 1.9e-16 90.5 67 65.7
Sed0022332 Sechium edule HOM05D005543 ORTHO05D006584 1.9e-16 90.5 76 63.2
Carub.0002s1854 Capsella rubella HOM05D005543 ORTHO05D006584 3.3e-16 89.7 67 61.2
CDE05G2658 Ceratophyllum demersum HOM05D005543 ORTHO05D006584 3.3e-16 89.7 74 55.4
MELO3C019959.2 Cucumis melo HOM05D005543 ORTHO05D006584 3.3e-16 89.7 74 59.5
DCAR_009611 Daucus carota HOM05D005543 ORTHO05D006584 3.3e-16 89.7 68 63.2
BraA07t31358Z Brassica rapa HOM05D005543 ORTHO05D006584 4.3e-16 89.4 67 58.2
BcaC08g46604 Brassica carinata HOM05D005543 ORTHO05D006584 5.7e-16 89.0 67 58.2
C06p45840 Brassica napus HOM05D005543 ORTHO05D006584 5.7e-16 89.0 67 58.2
BolC6t39636H Brassica oleracea HOM05D005543 ORTHO05D006584 5.7e-16 89.0 67 58.2
AT1G71780 Arabidopsis thaliana HOM05D005543 ORTHO05D006584 9.6e-16 88.2 67 58.2
Thhalv10019179m.g Eutrema salsugineum HOM05D005543 ORTHO05D006584 9.6e-16 88.2 67 58.2
AL2G31350 Arabidopsis lyrata HOM05D005543 ORTHO05D006584 1.3e-15 87.8 67 58.2
ClCG08G007180 Citrullus lanatus HOM05D005543 ORTHO05D006584 1.3e-15 87.8 74 58.1
Ah.05g168360 Amaranthus hybridus HOM05D005543 ORTHO05D006584 1.6e-15 87.4 68 57.4
A07p30600 Brassica napus HOM05D005543 ORTHO05D006584 1.6e-15 87.4 74 55.4
BraA07t30695Z Brassica rapa HOM05D005543 ORTHO05D006584 1.6e-15 87.4 74 55.4
A07p37930 Brassica napus HOM05D005543 ORTHO05D006584 2.8e-15 86.7 67 56.7
Sp5g26800 Schrenkiella parvula HOM05D005543 ORTHO05D006584 6.3e-15 85.5 67 56.7
SpUn0095_0030 Schrenkiella parvula HOM05D005543 ORTHO05D006584 6.3e-15 85.5 67 56.7
BolC6t38643H Brassica oleracea HOM05D005543 ORTHO05D006584 8.2e-15 85.1 74 54.1
HPP92_007671 Vanilla planifolia HOM05D005543 ORTHO05D006584 1.1e-14 84.7 67 55.2
BcaB03g15617 Brassica carinata HOM05D005543 ORTHO05D006584 1.8e-14 84.0 67 55.2
Nn1g05159 Nelumbo nucifera HOM05D005543 ORTHO05D006584 3.1e-14 83.2 69 56.5
BcaC08g45757 Brassica carinata HOM05D005543 ORTHO05D006584 4.1e-14 82.8 74 52.7
C06p35380 Brassica napus HOM05D005543 ORTHO05D006584 4.1e-14 82.8 74 52.7
CARHR291000 Cardamine hirsuta HOM05D005543 ORTHO05D006584 5.3e-14 82.4 67 55.2
Lj7A386T90 Lonicera japonica HOM05D005543 ORTHO05D006584 6.9e-14 82.0 65 56.9
Aa31LG4G8860 Aethionema arabicum HOM05D005543 ORTHO05D006584 9.0e-14 81.6 67 53.7
Os01g0715800 Oryza sativa ssp. japonica HOM05D005543 ORTHO05D006584 9.0e-14 81.6 76 51.3
Psat6g189440 Pisum sativum HOM05D005543 ORTHO05D006584 2.6e-13 80.1 72 52.8
Ca_10645_v3 Cicer arietinum L. HOM05D005543 ORTHO05D006584 2.9e-12 76.6 80 47.5
TPR.G17022 Trifolium pratense HOM05D005543 ORTHO05D006584 1.9e-11 73.9 78 47.4
Medtr1g097400 Medicago truncatula HOM05D005543 ORTHO05D006584 2.1e-10 70.5 71 47.9
SEGI_37275 Sequoiadendron giganteum HOM05D005543 ORTHO05D006584 6.3e-07 58.9 66 42.4
SEGI_03773 Sequoiadendron giganteum HOM05D005543 ORTHO05D006584 1.8e-06 57.4 66 43.9
SEGI_04047 Sequoiadendron giganteum HOM05D005543 ORTHO05D006584 1.8e-06 57.4 66 43.9
Lj4A705G47 Lonicera japonica HOM05D005543 ORTHO05D006584 3.1e-06 56.6 38 71.1


User provided reference genes

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