Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0016362 Camellia sinensis var. sinensis HOM05D006937 ORTHO05D008747 2.5e-66 255.4 134 100.0
CSS0011527 Camellia sinensis var. sinensis HOM05D006937 ORTHO05D008747 9.2e-37 157.1 151 65.6
Dinv34099 Davidia involucrata HOM05D003669 ORTHO05D005046 2.9e-35 152.1 150 63.3
CiPaw.06G089000 Carya illinoinensis HOM05D006937 ORTHO05D008747 7.3e-34 147.5 149 61.1
Nitab4.5_0000391g0170 Nicotiana tabacum HOM05D006937 ORTHO05D008747 3.6e-33 145.2 141 61.7
Glyma.01G053200 Glycine max HOM05D006937 ORTHO05D008747 8.0e-33 144.1 149 60.4
Hund25447 Selenicereus undatus HOM05D006937 ORTHO05D008747 8.0e-33 144.1 144 57.6
Duzib268G1027 Durio zibethinus HOM05D006937 ORTHO05D008747 1.0e-32 143.7 137 61.3
CAN.G1642.3 Capsicum annuum HOM05D006937 ORTHO05D008747 1.8e-32 142.9 151 58.9
AUR62024142 Chenopodium quinoa HOM05D006937 ORTHO05D008747 2.3e-32 142.5 137 59.9
Nn3g17337 Nelumbo nucifera HOM05D006937 ORTHO05D008747 3.1e-32 142.1 151 58.3
Sopen05g007730 Solanum pennellii HOM05D006937 ORTHO05D008747 3.1e-32 142.1 151 57.0
PGSC0003DMG401028340 Solanum tuberosum HOM05D006937 ORTHO05D008747 3.1e-32 142.1 151 58.3
CAN.G964.22 Capsicum annuum HOM05D006937 ORTHO05D008747 5.2e-32 141.4 151 58.3
Manes.01G032100 Manihot esculenta HOM05D006937 ORTHO05D008747 8.9e-32 140.6 147 58.5
Ciclev10032989m.g Citrus clementina HOM05D006937 ORTHO05D008747 1.5e-31 139.8 149 59.1
PSO541G5056 Papaver somniferum HOM05D006937 ORTHO05D008747 1.5e-31 139.8 135 60.0
Glyma.02G111700 Glycine max HOM05D006937 ORTHO05D008747 2.0e-31 139.4 149 58.4
Eucgr.G02475 Eucalyptus grandis HOM05D006937 ORTHO05D008747 3.4e-31 138.7 149 57.7
TAR629G2875 Trochodendron aralioides HOM05D006937 ORTHO05D008747 3.4e-31 138.7 151 56.3
CANSAT64G0520 Cannabis sativa HOM05D006937 ORTHO05D008747 4.4e-31 138.3 147 57.1
AUR62005588 Chenopodium quinoa HOM05D006937 ORTHO05D008747 4.4e-31 138.3 133 59.4
Gohir.A05G305601 Gossypium hirsutum HOM05D006937 ORTHO05D008747 7.5e-31 137.5 147 58.5
Gorai.009G325600 Gossypium raimondii HOM05D006937 ORTHO05D008747 7.5e-31 137.5 147 57.8
MD13G1068100 Malus domestica HOM05D006937 ORTHO05D008747 7.5e-31 137.5 147 58.5
QL03p069840 Quercus lobata HOM05D006937 ORTHO05D008747 7.5e-31 137.5 149 58.4
MD16G1066900 Malus domestica HOM05D006937 ORTHO05D008747 9.8e-31 137.1 147 57.8
Haze_11954 Corylus avellana HOM05D006937 ORTHO05D008747 1.3e-30 136.7 158 55.1
Gohir.D05G305600 Gossypium hirsutum HOM05D006937 ORTHO05D008747 1.3e-30 136.7 147 57.8
Thecc.02G339100 Theobroma cacao HOM05D006937 ORTHO05D008747 1.3e-30 136.7 147 57.8
Sed0007221 Sechium edule HOM05D006937 ORTHO05D008747 1.7e-30 136.3 149 55.7
Prupe.1G280000 Prunus persica HOM05D006937 ORTHO05D008747 2.2e-30 136.0 147 57.8
TWI60G0457 Tripterygium wilfordii HOM05D006937 ORTHO05D008747 2.2e-30 136.0 145 57.9
Lj1g0016193 Lotus japonicus HOM05D006937 ORTHO05D008747 3.7e-30 135.2 147 57.1
COL.COLO4_27967 Corchorus olitorius HOM05D006937 ORTHO05D008747 6.4e-30 134.4 147 55.8
DCAR_018308 Daucus carota HOM05D006937 ORTHO05D008747 6.4e-30 134.4 147 57.1
MSTRG.2329 Avicennia marina HOM05D006937 ORTHO05D008747 8.3e-30 134.0 146 57.5
Cc11_g12540 Coffea canephora HOM05D006937 ORTHO05D008747 8.3e-30 134.0 147 57.1
Lj3A1033G46 Lonicera japonica HOM05D006937 ORTHO05D008747 8.3e-30 134.0 128 64.8
Sed0004013 Sechium edule HOM05D006937 ORTHO05D008747 1.9e-29 132.9 151 53.6
VMungo1215G2773 Vigna mungo HOM05D006937 ORTHO05D008747 1.9e-29 132.9 146 55.5
Atru.chr11.1713 Acer truncatum HOM05D006937 ORTHO05D008747 2.4e-29 132.5 149 57.0
SGA_v2.0_scaffold287G47146 Striga asiatica HOM05D006937 ORTHO05D008747 2.4e-29 132.5 146 56.8
MELO3C024261.2 Cucumis melo HOM05D006937 ORTHO05D008747 3.2e-29 132.1 146 56.2
Phvul.001G169600 Phaseolus vulgaris HOM05D006937 ORTHO05D008747 5.4e-29 131.3 149 55.0
Actinidia31958 Actinidia chinensis HOM05D003669 ORTHO05D005046 7.0e-29 131.0 160 55.6
SGA_v2.0_scaffold114G32026 Striga asiatica HOM05D006937 ORTHO05D008747 1.2e-28 130.2 156 53.8
CsaV3_7G033500 Cucumis sativus L. HOM05D006937 ORTHO05D008747 1.6e-28 129.8 146 54.8
Lj6g0000786 Lotus japonicus HOM05D006937 ORTHO05D008747 2.0e-28 129.4 147 54.4
Lalb_Chr10g0098481 Lupinus albus HOM05D006937 ORTHO05D008747 2.7e-28 129.0 146 56.2
PSO675G6138 Papaver somniferum HOM05D006937 ORTHO05D008747 3.5e-28 128.6 145 55.2
GSVIVG01025409001 Vitis vinifera HOM05D006937 ORTHO05D008747 3.5e-28 128.6 147 55.1
Eucgr.D01709 Eucalyptus grandis HOM05D006937 ORTHO05D008747 4.6e-28 128.3 149 55.0
ATR0730G163 Amborella trichopoda HOM05D006937 ORTHO05D008747 6.0e-28 127.9 146 54.1
Medtr5g042620 Medicago truncatula HOM05D006937 ORTHO05D008747 6.0e-28 127.9 147 52.4
Potri.008G091400 Populus trichocarpa HOM05D006937 ORTHO05D008747 6.0e-28 127.9 149 53.7
Migut.E00068 Erythranthe guttata HOM05D006937 ORTHO05D008747 7.8e-28 127.5 143 54.5
EL10Ac6g13467 Beta vulgaris HOM05D006937 ORTHO05D008747 1.7e-27 126.3 147 52.4
FvH4_4g30700 Fragaria vesca HOM05D006937 ORTHO05D008747 6.6e-27 124.4 147 52.4
FAN17G2174 Fragaria x ananassa HOM05D006937 ORTHO05D008747 6.6e-27 124.4 147 52.4
RcHm_v2.0_Chr4g0439101 Rosa chinensis HOM05D006937 ORTHO05D008747 6.6e-27 124.4 147 52.4
ECA246G2190 Erigeron canadensis HOM05D006937 ORTHO05D008747 1.5e-26 123.2 144 54.2
HanXRQChr17g0537301 Helianthus annuus HOM05D006937 ORTHO05D008747 1.9e-26 122.9 149 51.7
unitig_744.g24284 Utricularia gibba HOM05D006937 ORTHO05D008747 1.9e-26 122.9 158 49.4
arahy.Tifrunner.gnm1.ann1.TRF8LB Arachis hypogaea HOM05D006937 ORTHO05D008747 3.3e-26 122.1 149 52.3
FAN07G0310 Fragaria x ananassa HOM05D006937 ORTHO05D008747 9.5e-26 120.6 147 51.0
Os07g0595800 Oryza sativa ssp. japonica HOM05D006937 ORTHO05D008747 1.6e-25 119.8 144 50.0
Lsat_1_v5_gn_3_20221 Lactuca sativa HOM05D006937 ORTHO05D008747 2.1e-25 119.4 146 52.1
Oeu016239.1 Olea europaea HOM05D006937 ORTHO05D008747 2.1e-25 119.4 127 59.1
Zm00001eb326530 Zea mays HOM05D006937 ORTHO05D008747 2.1e-25 119.4 144 49.3
Aqoxy3G03499 Aquilegia oxysepala HOM05D006937 ORTHO05D008747 2.8e-25 119.0 147 51.0
SHI35111 Sapria himalayana HOM05D006937 ORTHO05D008747 3.6e-25 118.6 120 56.7
Aqoxy5G02063 Aquilegia oxysepala HOM05D006937 ORTHO05D008747 8.1e-25 117.5 144 51.4
TPR.G19944 Trifolium pratense HOM05D006937 ORTHO05D008747 1.1e-24 117.1 147 48.3
Aqoxy5G02982 Aquilegia oxysepala HOM05D006937 ORTHO05D008747 3.1e-24 115.5 143 51.0
arahy.Tifrunner.gnm1.ann1.A48TS2 Arachis hypogaea HOM05D006937 ORTHO05D008747 4.0e-24 115.2 156 50.0
arahy.Tifrunner.gnm1.ann1.8BL9U8 Arachis hypogaea HOM05D006937 ORTHO05D008747 1.2e-23 113.6 149 50.3
HPP92_013408 Vanilla planifolia HOM05D006937 ORTHO05D008747 1.2e-23 113.6 113 56.6
Peaxi162Scf00222g00024 Petunia axillaris HOM05D006937 ORTHO05D008747 2.0e-23 112.8 106 60.4
Nitab4.5_0008978g0010 Nicotiana tabacum HOM05D006937 ORTHO05D008747 3.4e-23 112.1 198 43.4
Psat2g127680 Pisum sativum HOM05D006937 ORTHO05D008747 7.5e-23 110.9 127 52.8
Rhsim12G0077900 Rhododendron simsii HOM05D006937 ORTHO05D008747 2.2e-22 109.4 111 62.2
Ah.02g130690 Amaranthus hybridus HOM05D006937 ORTHO05D008747 6.4e-22 107.8 124 54.0
SEGI_41088 Sequoiadendron giganteum HOM05D006937 ORTHO05D008747 7.1e-21 104.4 141 46.8
CDE11G0882 Ceratophyllum demersum HOM05D006937 ORTHO05D008747 7.8e-20 100.9 168 42.3
PGR142G2813 Punica granatum HOM05D006937 ORTHO05D008747 1.9e-18 96.3 147 44.9
PGR119G1353 Punica granatum HOM05D006937 ORTHO05D008747 5.6e-18 94.7 152 43.4
FAN12G3635 Fragaria x ananassa HOM05D006937 ORTHO05D008747 2.1e-17 92.8 106 53.8
Sc11g0000570 Simmondsia chinensis HOM05D006937 ORTHO05D008747 3.6e-17 92.0 109 52.3
Ca_04880_v3 Cicer arietinum L. HOM05D006937 ORTHO05D008747 6.8e-16 87.8 110 48.2
AagrBONN_evm.TU.Sc2ySwM_228.447 Anthoceros agrestis HOM05D006937 ORTHO05D008747 3.4e-15 85.5 148 39.9
Sabra08G0068400 Salix brachista HOM05D006937 ORTHO05D008747 1.7e-14 83.2 112 47.3
THA.LOC104808654 Tarenaya hassleriana HOM05D006937 ORTHO05D008747 4.9e-14 81.6 147 39.5
BcaC06g35132 Brassica carinata HOM05D006937 ORTHO05D008747 2.4e-13 79.3 147 40.1
A07p13030 Brassica napus HOM05D001252 ORTHO05D005295 2.4e-13 79.3 147 40.1
Aa31LG7G8430 Aethionema arabicum HOM05D006937 ORTHO05D008747 3.2e-13 79.0 149 38.3
BcaB03g14081 Brassica carinata HOM05D006937 ORTHO05D008747 3.2e-13 79.0 149 38.9
BolC7t42467H Brassica oleracea HOM05D001252 ORTHO05D001661 3.2e-13 79.0 149 38.9
AL1G39070 Arabidopsis lyrata HOM05D006937 ORTHO05D008747 4.1e-13 78.6 147 38.8
C07p19480 Brassica napus HOM05D001252 ORTHO05D005295 4.1e-13 78.6 147 39.5
BraA07t29074Z Brassica rapa HOM05D001252 ORTHO05D005295 5.4e-13 78.2 159 39.0
Sp6g00050 Schrenkiella parvula HOM05D006937 ORTHO05D008747 1.2e-12 77.0 144 39.6
AT1G26660 Arabidopsis thaliana HOM05D006937 ORTHO05D008747 2.1e-12 76.3 147 38.8
BcaB05g21932 Brassica carinata HOM05D006937 ORTHO05D008747 2.1e-12 76.3 149 37.6
Carub.0001s2437 Capsella rubella HOM05D006937 ORTHO05D008747 3.5e-12 75.5 147 38.8
Pp3c21_19110 Physcomitrium patens HOM05D006937 ORTHO05D008747 3.5e-12 75.5 138 36.2
CBR_g48697 Chara braunii HOM05D006937 ORTHO05D008747 6.0e-12 74.7 143 33.6
Mapoly0006s0094 Marchantia polymorpha HOM05D006937 ORTHO05D008747 6.0e-12 74.7 141 36.9
Thhalv10008997m.g Eutrema salsugineum HOM05D006937 ORTHO05D008747 1.0e-11 73.9 147 37.4
arahy.Tifrunner.gnm1.ann1.J4SELD Arachis hypogaea HOM05D006937 ORTHO05D008747 1.7e-11 73.2 101 46.5
ClCG09G001850 Citrullus lanatus HOM05D006937 ORTHO05D008747 4.7e-09 65.1 54 66.7


User provided reference genes

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