Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0002049 Camellia sinensis var. sinensis HOM05D005136 ORTHO05D006619 4.6e-74 281.2 146 100.0
CSS0016345 Camellia sinensis var. sinensis HOM05D005136 ORTHO05D006619 4.6e-74 281.2 146 100.0
CSS0049550 Camellia sinensis var. sinensis HOM05D005136 ORTHO05D006619 4.6e-74 281.2 146 100.0
CSS0025161 Camellia sinensis var. sinensis HOM05D005136 ORTHO05D006619 2.5e-72 275.4 146 97.9
Dinv23543 Davidia involucrata HOM05D005136 ORTHO05D006619 6.6e-65 250.8 146 89.7
vmacro08119 Vaccinium macrocarpon HOM05D005136 ORTHO05D006619 1.1e-64 250.0 146 89.0
Rhsim11G0174400 Rhododendron simsii HOM05D005136 ORTHO05D006619 9.6e-64 246.9 146 88.4
Dinv42084 Davidia involucrata HOM05D005136 ORTHO05D006619 8.1e-63 243.8 146 88.4
Cfa005022 Carpinus fangiana HOM05D005136 ORTHO05D006619 4.0e-62 241.5 146 87.0
Haze_02365 Corylus avellana HOM05D005136 ORTHO05D006619 4.0e-62 241.5 146 87.0
Thecc.02G123900 Theobroma cacao HOM05D005136 ORTHO05D006619 9.0e-62 240.4 146 85.6
Hund22263 Selenicereus undatus HOM05D005136 ORTHO05D006619 4.5e-61 238.0 146 87.7
Cc02_g20820 Coffea canephora HOM05D005136 ORTHO05D006619 1.3e-60 236.5 146 87.7
Cc02_g17760 Coffea canephora HOM05D005136 ORTHO05D006619 1.7e-60 236.1 146 87.7
Sc09g0004050 Simmondsia chinensis HOM05D005136 ORTHO05D006619 1.7e-60 236.1 148 83.8
TAR628G0554 Trochodendron aralioides HOM05D005136 ORTHO05D006619 3.8e-60 235.0 146 84.2
TAR628G1226 Trochodendron aralioides HOM05D005136 ORTHO05D006619 3.8e-60 235.0 146 84.2
Duzib132G0024 Durio zibethinus HOM05D005136 ORTHO05D006619 1.1e-59 233.4 146 84.2
TAR625G1013 Trochodendron aralioides HOM05D005136 ORTHO05D006619 1.9e-59 232.6 146 84.9
FvH4_2g08450 Fragaria vesca HOM05D005136 ORTHO05D006619 4.2e-59 231.5 144 83.3
FAN24G0166 Fragaria x ananassa HOM05D005136 ORTHO05D006619 4.2e-59 231.5 144 83.3
RcHm_v2.0_Chr6g0263731 Rosa chinensis HOM05D005136 ORTHO05D006619 4.2e-59 231.5 144 83.3
Migut.B00252 Erythranthe guttata HOM05D005136 ORTHO05D006619 5.4e-59 231.1 146 82.2
Nn1g02125 Nelumbo nucifera HOM05D005136 ORTHO05D006619 5.4e-59 231.1 144 83.3
FAN27G1698 Fragaria x ananassa HOM05D005136 ORTHO05D006619 7.1e-59 230.7 144 83.3
Potri.004G152700 Populus trichocarpa HOM05D005136 ORTHO05D006619 7.1e-59 230.7 147 83.7
FAN15G2434 Fragaria x ananassa HOM05D005136 ORTHO05D006619 9.3e-59 230.3 144 82.6
Oeu014338.1 Olea europaea HOM05D005136 ORTHO05D006619 9.3e-59 230.3 146 80.8
CiPaw.05G062700 Carya illinoinensis HOM05D005136 ORTHO05D006619 1.2e-58 229.9 146 84.2
Peaxi162Scf00346g00043 Petunia axillaris HOM05D005136 ORTHO05D006619 1.6e-58 229.6 146 82.2
Lj5P199T42 Lonicera japonica HOM05D005136 ORTHO05D006619 3.5e-58 228.4 146 83.6
SalBow6G6037 Salvia bowleyana HOM05D005136 ORTHO05D006619 4.6e-58 228.0 146 80.8
DCAR_026977 Daucus carota HOM05D005136 ORTHO05D006619 6.0e-58 227.6 146 82.2
Hma1.2p1_1375F.1_g278970 Hydrangea macrophylla HOM05D005136 ORTHO05D006619 6.0e-58 227.6 147 83.7
Hma1.2p1_3179F.1_g333696 Hydrangea macrophylla HOM05D005136 ORTHO05D006619 6.0e-58 227.6 147 83.7
Nitab4.5_0009564g0010 Nicotiana tabacum HOM05D005136 ORTHO05D006619 6.0e-58 227.6 147 81.6
Ciclev10029521m.g Citrus clementina HOM05D005136 ORTHO05D006619 7.9e-58 227.3 146 83.6
COL.COLO4_32439 Corchorus olitorius HOM05D005136 ORTHO05D006619 7.9e-58 227.3 147 83.0
Eucgr.G00447 Eucalyptus grandis HOM05D005136 ORTHO05D006619 7.9e-58 227.3 146 81.5
Manes.17G099700 Manihot esculenta HOM05D005136 ORTHO05D006619 7.9e-58 227.3 147 84.4
ClCG11G004520 Citrullus lanatus HOM05D005136 ORTHO05D006619 1.3e-57 226.5 147 81.6
Sed0024996 Sechium edule HOM05D005136 ORTHO05D006619 1.3e-57 226.5 147 81.6
MD05G1068400 Malus domestica HOM05D005136 ORTHO05D006619 1.8e-57 226.1 146 81.5
AUR62038311 Chenopodium quinoa HOM05D005136 ORTHO05D006619 2.3e-57 225.7 146 81.5
Ah.01g016850 Amaranthus hybridus HOM05D005136 ORTHO05D006619 3.0e-57 225.3 146 81.5
Cpa.g.sc31.66 Carica papaya HOM05D005136 ORTHO05D006619 3.0e-57 225.3 146 81.5
CiPaw.06G136800 Carya illinoinensis HOM05D005136 ORTHO05D006619 3.9e-57 224.9 146 80.8
SGA_v2.0_scaffold106G30693 Striga asiatica HOM05D005136 ORTHO05D006619 5.1e-57 224.6 146 80.1
Atru.chr8.1229 Acer truncatum HOM05D005136 ORTHO05D006619 6.7e-57 224.2 146 84.2
HanXRQChr05g0152051 Helianthus annuus HOM05D005136 ORTHO05D006619 1.5e-56 223.0 147 81.0
AUR62023928 Chenopodium quinoa HOM05D005136 ORTHO05D006619 2.5e-56 222.2 146 80.1
CAN.G1312.12 Capsicum annuum HOM05D005136 ORTHO05D006619 3.3e-56 221.9 146 80.1
CsaV3_2G014570 Cucumis sativus L. HOM05D005136 ORTHO05D006619 3.3e-56 221.9 147 80.3
MD10G1078600 Malus domestica HOM05D005136 ORTHO05D006619 3.3e-56 221.9 146 80.1
MELO3C020986.2 Cucumis melo HOM05D005136 ORTHO05D006619 4.3e-56 221.5 147 80.3
Sopen08g026750 Solanum pennellii HOM05D005136 ORTHO05D006619 4.3e-56 221.5 147 80.3
PGSC0003DMG400026262 Solanum tuberosum HOM05D005136 ORTHO05D006619 4.3e-56 221.5 147 80.3
Aqoxy5G01670 Aquilegia oxysepala HOM05D005136 ORTHO05D006619 7.4e-56 220.7 149 79.9
Gohir.D12G018500 Gossypium hirsutum HOM05D005136 ORTHO05D006619 7.4e-56 220.7 147 81.6
Gorai.008G018800 Gossypium raimondii HOM05D005136 ORTHO05D006619 7.4e-56 220.7 147 81.6
Prupe.8G100500 Prunus persica HOM05D005136 ORTHO05D006619 7.4e-56 220.7 146 82.2
MBI16_g37741_MAGBIO Magnolia biondii HOM05D005136 ORTHO05D006619 1.6e-55 219.5 146 82.9
QL11p043069 Quercus lobata HOM05D005136 ORTHO05D006619 1.6e-55 219.5 145 80.7
Solyc08g078240.4 Solanum lycopersicum HOM05D005136 ORTHO05D006619 1.6e-55 219.5 144 80.6
Gohir.A12G017900 Gossypium hirsutum HOM05D005136 ORTHO05D006619 2.8e-55 218.8 147 81.0
MSTRG.16796 Avicennia marina HOM05D005136 ORTHO05D006619 4.8e-55 218.0 146 79.5
Glyma.04G123300 Glycine max HOM05D005136 ORTHO05D006619 4.8e-55 218.0 147 80.3
VMungo1215G0362 Vigna mungo HOM05D005136 ORTHO05D006619 1.8e-54 216.1 147 78.2
EL10Ac9g21088 Beta vulgaris HOM05D005136 ORTHO05D006619 2.4e-54 215.7 137 82.5
Lj3g0003138 Lotus japonicus HOM05D005136 ORTHO05D006619 3.1e-54 215.3 147 80.3
Phvul.002G127500 Phaseolus vulgaris HOM05D005136 ORTHO05D006619 3.1e-54 215.3 147 78.9
PGR042G3747 Punica granatum HOM05D005136 ORTHO05D006619 1.2e-53 213.4 147 78.9
Lsat_1_v5_gn_7_89621 Lactuca sativa HOM05D005136 ORTHO05D006619 2.0e-53 212.6 147 78.2
PSO700G0271 Papaver somniferum HOM05D005136 ORTHO05D006619 2.0e-53 212.6 147 81.0
Nn1g05055 Nelumbo nucifera HOM05D005136 ORTHO05D006619 4.5e-53 211.5 147 76.2
Ca_15377_v3 Cicer arietinum L. HOM05D005136 ORTHO05D006619 1.7e-52 209.5 147 76.9
Lalb_Chr19g0138591 Lupinus albus HOM05D005136 ORTHO05D006619 2.2e-52 209.1 145 75.9
Medtr3g116260 Medicago truncatula HOM05D005136 ORTHO05D006619 2.2e-52 209.1 149 75.8
CANSAT11G0677 Cannabis sativa HOM05D005136 ORTHO05D006619 3.8e-52 208.4 155 75.5
Lalb_Chr23g0265461 Lupinus albus HOM05D005136 ORTHO05D006619 3.8e-52 208.4 147 72.8
Psat5g007800 Pisum sativum HOM05D005136 ORTHO05D006619 1.6e-50 203.0 146 76.7
Psat5g103000 Pisum sativum HOM05D005136 ORTHO05D006619 2.1e-50 202.6 146 76.7
HPP92_013432 Vanilla planifolia HOM05D005136 ORTHO05D006619 4.6e-50 201.4 150 74.0
HPP92_027116 Vanilla planifolia HOM05D005136 ORTHO05D006619 4.6e-50 201.4 150 74.0
ATR1120G109 Amborella trichopoda HOM05D005136 ORTHO05D006619 7.9e-50 200.7 149 73.8
Glyma.09G214900 Glycine max HOM05D005136 ORTHO05D006619 1.0e-49 200.3 139 77.7
CSS0021040 Camellia sinensis var. sinensis HOM05D005136 ORTHO05D006619 6.7e-49 197.6 139 79.1
TWI31G0294 Tripterygium wilfordii HOM05D005136 ORTHO05D006619 6.7e-49 197.6 150 76.0
TWI79G0765 Tripterygium wilfordii HOM05D005136 ORTHO05D006619 1.1e-48 196.8 152 73.7
CARHR012080 Cardamine hirsuta HOM05D005136 ORTHO05D006619 3.3e-48 195.3 152 72.4
THA.LOC104823526 Tarenaya hassleriana HOM05D005136 ORTHO05D006619 2.8e-47 192.2 150 71.3
AL1G22940 Arabidopsis lyrata HOM05D005136 ORTHO05D006619 4.8e-47 191.4 154 70.1
Aa31LG1G2990 Aethionema arabicum HOM05D005136 ORTHO05D006619 8.2e-47 190.7 150 68.7
AT1G11760 Arabidopsis thaliana HOM05D005136 ORTHO05D006619 8.2e-47 190.7 153 70.6
Thhalv10008721m.g Eutrema salsugineum HOM05D005136 ORTHO05D006619 1.8e-46 189.5 157 68.2
BcaB03g13232 Brassica carinata HOM05D005136 ORTHO05D006619 4.0e-46 188.3 152 70.4
Gorai.005G228100 Gossypium raimondii HOM05D005136 ORTHO05D006619 4.0e-46 188.3 146 71.9
Gohir.D02G202838 Gossypium hirsutum HOM05D005136 ORTHO05D006619 6.9e-46 187.6 146 71.9
Sp1g10380 Schrenkiella parvula HOM05D005136 ORTHO05D006619 6.9e-46 187.6 153 68.6
Actinidia00512 Actinidia chinensis HOM05D005136 ORTHO05D006619 1.2e-45 186.8 115 85.2
Gohir.A03G179300 Gossypium hirsutum HOM05D005136 ORTHO05D006619 1.5e-45 186.4 146 71.9
Carub.0001s1142 Capsella rubella HOM05D005136 ORTHO05D006619 2.0e-45 186.0 154 68.8
BolC8t49124H Brassica oleracea HOM05D004968 ORTHO05D005922 3.8e-44 181.8 147 69.4
C08p14950 Brassica napus HOM05D004968 ORTHO05D005922 1.1e-43 180.3 147 68.7
unitig_37.g12818 Utricularia gibba HOM05D005136 ORTHO05D006619 3.9e-41 171.8 152 64.5
EL10Ac7g17776 Beta vulgaris HOM05D005136 ORTHO05D006619 1.5e-40 169.9 145 66.9
A08p33240 Brassica napus HOM05D004968 ORTHO05D005922 1.5e-40 169.9 138 69.6
BraA08t35243Z Brassica rapa HOM05D004968 ORTHO05D005922 1.5e-40 169.9 138 69.6
Nitab4.5_0002601g0030 Nicotiana tabacum HOM05D005136 ORTHO05D006619 2.5e-40 169.1 109 84.4
Prupe.5G020100 Prunus persica HOM05D005136 ORTHO05D006619 2.2e-39 166.0 149 61.7
PSO170G5319 Papaver somniferum HOM05D005136 ORTHO05D006619 4.8e-39 164.9 111 82.0
Os10g0548400 Oryza sativa ssp. japonica HOM05D005136 ORTHO05D006619 9.0e-38 160.6 161 57.8
SalBow6G1117 Salvia bowleyana HOM05D005136 ORTHO05D006619 9.0e-38 160.6 105 80.0
ECA236G0931 Erigeron canadensis HOM05D005136 ORTHO05D006619 1.2e-37 160.2 149 63.1
RcHm_v2.0_Chr6g0264001 Rosa chinensis HOM05D005136 ORTHO05D006619 5.0e-36 154.8 100 81.0
TPR.G21542 Trifolium pratense HOM05D005136 ORTHO05D006619 1.4e-35 153.3 147 61.9
BcaB08g37416 Brassica carinata HOM05D005136 ORTHO05D006619 3.2e-35 152.1 146 60.3
Zm00001eb284000 Zea mays HOM05D005136 ORTHO05D006619 5.5e-35 151.4 150 59.3
Pp3c10_12480 Physcomitrium patens HOM05D005136 ORTHO05D006619 8.2e-31 137.5 152 55.9
EL10Ac8g18726 Beta vulgaris HOM05D006015 ORTHO05D007816 1.4e-30 136.7 131 58.8
EL10Ac9g21097 Beta vulgaris HOM05D006015 ORTHO05D006619 4.1e-30 135.2 131 58.0
EL10Ac1g02225 Beta vulgaris HOM05D005136 ORTHO05D006619 1.3e-28 130.2 166 51.2
SHI23962 Sapria himalayana HOM05D005136 ORTHO05D006619 2.2e-28 129.4 133 59.4
Atru.chr5.2947 Acer truncatum HOM05D005136 ORTHO05D006619 6.5e-28 127.9 86 81.4
SMO174G0113 Selaginella moellendorffii HOM05D005136 ORTHO05D006619 1.1e-27 127.1 128 54.7
Mapoly0003s0019 Marchantia polymorpha HOM05D005136 ORTHO05D006619 1.6e-26 123.2 151 50.3
CDE02G3080 Ceratophyllum demersum HOM05D005136 ORTHO05D006619 2.7e-26 122.5 85 76.5
Sc09g0004030 Simmondsia chinensis HOM05D005136 ORTHO05D006619 4.1e-22 108.6 148 48.0
Sp2g23220 Schrenkiella parvula HOM05D005136 ORTHO05D006619 1.2e-18 97.1 83 65.1
Oeu014337.1 Olea europaea HOM05D005136 ORTHO05D006619 2.7e-18 95.9 79 58.2
AagrBONN_evm.TU.Sc2ySwM_369.532 Anthoceros agrestis HOM05D005136 ORTHO05D006619 6.1e-18 94.7 134 41.8
Hma1.2p1_0854F.1_g228935 Hydrangea macrophylla HOM05D005136 ORTHO05D006619 1.0e-17 94.0 71 69.0
Hma1.2p1_2665F.1_g326510 Hydrangea macrophylla HOM05D005136 ORTHO05D006619 1.0e-17 94.0 71 69.0
Medtr3g116310 Medicago truncatula HOM05D005136 ORTHO05D006619 3.0e-17 92.4 78 65.4
Psat4g095600 Pisum sativum HOM05D005136 ORTHO05D006619 2.0e-16 89.7 79 59.5
Lj4g0027023 Lotus japonicus HOM05D005136 ORTHO05D006619 2.8e-15 85.9 144 42.4
Thecc.02G123800 Theobroma cacao HOM05D005136 ORTHO05D006619 1.1e-14 84.0 71 62.0
COL.COLO4_32440 Corchorus olitorius HOM05D005136 ORTHO05D006619 1.8e-14 83.2 69 58.0
Gohir.A03G179400 Gossypium hirsutum HOM05D005136 ORTHO05D006619 3.1e-14 82.4 69 62.3
Gorai.005G228200 Gossypium raimondii HOM05D005136 ORTHO05D006619 4.1e-14 82.0 69 62.3
Gohir.D02G202857 Gossypium hirsutum HOM05D005136 ORTHO05D006619 5.3e-14 81.6 69 60.9
Nitab4.5_0012262g0010 Nicotiana tabacum HOM05D005136 ORTHO05D006619 8.5e-12 74.3 72 54.2
Nitab4.5_0002541g0070 Nicotiana tabacum HOM05D005136 ORTHO05D024799 1.5e-11 73.6 72 54.2
ECA233G0803 Erigeron canadensis HOM05D005136 ORTHO05D006619 8.0e-10 67.8 124 42.7
Os07g0229100 Oryza sativa ssp. japonica HOM05D011003 ORTHO05D012370 3.0e-09 65.9 72 48.6
CAN.G1435.13 Capsicum annuum HOM05D005136 ORTHO05D024799 1.2e-08 63.9 70 48.6
Solyc09g082750.1 Solanum lycopersicum HOM05D005136 ORTHO05D024799 7.0e-06 54.7 72 43.1


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